Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050119.1 Olea europaea HOM05D005188 ORTHO05D006153 1.4e-66 256.1 129 100.0
GSVIVG01026478001 Vitis vinifera HOM05D005188 ORTHO05D006153 5.2e-53 211.1 129 79.1
Oeu037826.1 Olea europaea HOM05D005188 ORTHO05D006153 1.5e-52 209.5 167 67.7
SalBow1G2748 Salvia bowleyana HOM05D005188 ORTHO05D006153 2.6e-52 208.8 159 67.3
MSTRG.2649 Avicennia marina HOM05D005188 ORTHO05D006153 4.4e-52 208.0 167 66.5
TWI75G0084 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 6.3e-51 204.1 166 65.7
Hund23270 Selenicereus undatus HOM05D005188 ORTHO05D006153 4.1e-50 201.4 110 86.4
Migut.H00702 Erythranthe guttata HOM05D005188 ORTHO05D006153 5.3e-50 201.1 169 63.9
unitig_899.g14682 Utricularia gibba HOM05D005188 ORTHO05D006153 5.3e-50 201.1 165 64.2
Aqoxy5G02315 Aquilegia oxysepala HOM05D005188 ORTHO05D006153 2.6e-49 198.7 172 61.6
Hma1.2p1_0476F.1_g160790 Hydrangea macrophylla HOM05D005188 ORTHO05D006153 5.9e-49 197.6 171 62.0
SGA_v2.0_scaffold370G50114 Striga asiatica HOM05D005188 ORTHO05D006153 5.9e-49 197.6 161 64.6
TWI79G1553 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 5.9e-49 197.6 166 63.3
CAN.G792.16 Capsicum annuum HOM05D005188 ORTHO05D006153 1.7e-48 196.1 167 61.7
MD15G1441800 Malus domestica HOM05D005188 ORTHO05D006153 1.7e-48 196.1 170 61.2
Peaxi162Scf01257g00019 Petunia axillaris HOM05D005188 ORTHO05D006153 2.2e-48 195.7 180 60.0
Lj1g0024625 Lotus japonicus HOM05D005188 ORTHO05D006153 2.9e-48 195.3 168 62.5
Potri.005G063300 Populus trichocarpa HOM05D005188 ORTHO05D006153 3.8e-48 194.9 173 60.1
Glyma.04G215800 Glycine max HOM05D005188 ORTHO05D006153 5.0e-48 194.5 168 60.7
MBI06_g39404_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 5.0e-48 194.5 110 82.7
Manes.12G156000 Manihot esculenta HOM05D005188 ORTHO05D006153 5.0e-48 194.5 173 60.1
Potri.007G105900 Populus trichocarpa HOM05D005188 ORTHO05D006153 6.5e-48 194.1 173 60.1
AUR62017881 Chenopodium quinoa HOM05D005188 ORTHO05D006153 8.5e-48 193.7 170 60.6
Dinv24366 Davidia involucrata HOM05D005188 ORTHO05D006153 1.1e-47 193.4 169 59.8
Ah.02g121530 Amaranthus hybridus HOM05D005188 ORTHO05D006153 1.5e-47 193.0 168 60.1
ClCG01G015380 Citrullus lanatus HOM05D005188 ORTHO05D006153 1.5e-47 193.0 172 60.5
MBI06_g27435_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 1.5e-47 193.0 110 81.8
MD01G1004300 Malus domestica HOM05D005188 ORTHO05D006153 1.5e-47 193.0 170 60.6
CsaV3_6G041600 Cucumis sativus L. HOM05D005188 ORTHO05D006153 2.5e-47 192.2 172 59.9
Thhalv10005005m.g Eutrema salsugineum HOM05D005188 ORTHO05D006153 2.5e-47 192.2 171 59.6
Sabra05G0052500 Salix brachista HOM05D005188 ORTHO05D006153 2.5e-47 192.2 173 59.5
Sp2g27110 Schrenkiella parvula HOM05D005188 ORTHO05D006153 2.5e-47 192.2 171 59.6
Aa31LG1G17870 Aethionema arabicum HOM05D005188 ORTHO05D006153 3.2e-47 191.8 173 60.7
CiPaw.03G121400 Carya illinoinensis HOM05D005188 ORTHO05D006153 3.2e-47 191.8 112 82.1
MELO3C008060.2 Cucumis melo HOM05D005188 ORTHO05D006153 3.2e-47 191.8 172 59.9
HanXRQChr04g0107551 Helianthus annuus HOM05D005188 ORTHO05D006153 4.2e-47 191.4 165 63.0
QL02p001672 Quercus lobata HOM05D005188 ORTHO05D006153 4.2e-47 191.4 109 82.6
Solyc08g013670.3 Solanum lycopersicum HOM05D005188 ORTHO05D006153 4.2e-47 191.4 167 61.1
TAR381G0300 Trochodendron aralioides HOM05D005188 ORTHO05D006153 4.2e-47 191.4 111 83.8
C09p09640 Brassica napus HOM05D005188 ORTHO05D006153 5.5e-47 191.0 169 59.8
Lj2A607T35 Lonicera japonica HOM05D005188 ORTHO05D006153 5.5e-47 191.0 170 59.4
Sopen08g004510 Solanum pennellii HOM05D005188 ORTHO05D006153 5.5e-47 191.0 166 61.4
arahy.Tifrunner.gnm1.ann1.V5WWJ8 Arachis hypogaea HOM05D005188 ORTHO05D006153 9.4e-47 190.3 119 77.3
Nn2g12180 Nelumbo nucifera HOM05D005188 ORTHO05D006153 9.4e-47 190.3 174 60.3
arahy.Tifrunner.gnm1.ann1.DJM1RY Arachis hypogaea HOM05D005188 ORTHO05D006153 1.2e-46 189.9 111 80.2
EL10Ac6g15302 Beta vulgaris HOM05D005188 ORTHO05D006153 1.2e-46 189.9 114 79.8
CANSAT01G0911 Cannabis sativa HOM05D005188 ORTHO05D006153 1.2e-46 189.9 170 60.6
Medtr3g095540 Medicago truncatula HOM05D005188 ORTHO05D006153 1.2e-46 189.9 173 59.0
CARHR277950 Cardamine hirsuta HOM05D005188 ORTHO05D006153 1.6e-46 189.5 171 59.1
FvH4_1g24360 Fragaria vesca HOM05D005188 ORTHO05D006153 1.6e-46 189.5 163 63.2
FAN19G1208 Fragaria x ananassa HOM05D005188 ORTHO05D006153 1.6e-46 189.5 163 63.2
CSS0010064 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 2.1e-46 189.1 175 57.7
CSS0045275 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 2.1e-46 189.1 175 57.7
CiPaw.04G081900 Carya illinoinensis HOM05D005188 ORTHO05D006153 2.1e-46 189.1 177 59.3
Cc10_g12590 Coffea canephora HOM05D005188 ORTHO05D006153 2.1e-46 189.1 170 58.2
Glyma.06G150300 Glycine max HOM05D005188 ORTHO05D006153 2.1e-46 189.1 167 59.3
Lalb_Chr13g0296451 Lupinus albus HOM05D005188 ORTHO05D006153 2.1e-46 189.1 176 58.5
Cpa.g.sc3.345 Carica papaya HOM05D005188 ORTHO05D006153 2.7e-46 188.7 173 60.7
CDE08G0648 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 2.7e-46 188.7 172 59.3
BcaC01g02658 Brassica carinata HOM05D005188 ORTHO05D006153 3.6e-46 188.3 171 58.5
BcaC01g02659 Brassica carinata HOM05D005188 ORTHO05D006153 3.6e-46 188.3 171 58.5
Ca_16917_v3 Cicer arietinum L. HOM05D005188 ORTHO05D006153 3.6e-46 188.3 171 58.5
Gohir.A11G226800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.6e-46 188.3 175 58.9
Lsat_1_v5_gn_1_10061 Lactuca sativa HOM05D005188 ORTHO05D006153 3.6e-46 188.3 172 59.9
MBI03_g42548_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 3.6e-46 188.3 171 58.5
AL8G41300 Arabidopsis lyrata HOM05D005188 ORTHO05D006153 4.7e-46 188.0 172 58.1
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 4.7e-46 188.0 173 59.5
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 4.7e-46 188.0 173 59.5
Lj4g0001203 Lotus japonicus HOM05D005188 ORTHO05D006153 4.7e-46 188.0 160 61.2
BcaB07g29717 Brassica carinata HOM05D005188 ORTHO05D006153 6.1e-46 187.6 170 58.8
Gohir.D11G230800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 6.1e-46 187.6 175 58.9
AT5G64040 Arabidopsis thaliana HOM05D005188 ORTHO05D006153 8.0e-46 187.2 172 57.6
BcaB02g09793 Brassica carinata HOM05D005188 ORTHO05D006153 8.0e-46 187.2 171 57.9
COL.COLO4_35748 Corchorus olitorius HOM05D005188 ORTHO05D006153 8.0e-46 187.2 173 59.5
PGSC0003DMG400005805 Solanum tuberosum HOM05D005188 ORTHO05D006153 8.0e-46 187.2 173 59.5
A06p30750 Brassica napus HOM05D005188 ORTHO05D006153 1.0e-45 186.8 112 78.6
Actinidia06616 Actinidia chinensis HOM05D005188 ORTHO05D006153 1.4e-45 186.4 170 59.4
Ciclev10002687m.g Citrus clementina HOM05D005188 ORTHO05D006153 1.4e-45 186.4 171 59.1
Prupe.4G271200 Prunus persica HOM05D005188 ORTHO05D006153 1.4e-45 186.4 171 59.6
Cfa002897 Carpinus fangiana HOM05D005188 ORTHO05D006153 1.8e-45 186.0 176 58.0
Haze_25240 Corylus avellana HOM05D005188 ORTHO05D006153 1.8e-45 186.0 176 58.0
C02p63110 Brassica napus HOM05D005188 ORTHO05D006153 2.3e-45 185.7 170 58.2
BolC2t12383H Brassica oleracea HOM05D005188 ORTHO05D006153 2.3e-45 185.7 170 58.2
FAN28G1395 Fragaria x ananassa HOM05D002517 ORTHO05D003040 2.3e-45 185.7 161 62.1
Thecc.01G132900 Theobroma cacao HOM05D005188 ORTHO05D006153 2.3e-45 185.7 174 58.0
PGR008G0006 Punica granatum HOM05D005188 ORTHO05D006153 3.0e-45 185.3 167 58.1
PGR119G0239 Punica granatum HOM05D005188 ORTHO05D006153 3.0e-45 185.3 167 58.1
BcaC03g18240 Brassica carinata HOM05D005188 ORTHO05D006153 4.0e-45 184.9 170 58.2
PSO541G2775 Papaver somniferum HOM05D005188 ORTHO05D006153 4.0e-45 184.9 165 55.8
Carub.0008s2482 Capsella rubella HOM05D005188 ORTHO05D006153 5.2e-45 184.5 172 57.0
Sed0019160 Sechium edule HOM05D005188 ORTHO05D006153 5.2e-45 184.5 114 78.1
Rhsim10G0133700 Rhododendron simsii HOM05D005188 ORTHO05D006153 8.8e-45 183.7 110 79.1
HPP92_019391 Vanilla planifolia HOM05D005188 ORTHO05D006153 8.8e-45 183.7 165 60.0
Phvul.002G269400 Phaseolus vulgaris HOM05D005188 ORTHO05D006153 1.2e-44 183.3 171 56.7
Sed0010246 Sechium edule HOM05D005188 ORTHO05D006153 1.2e-44 183.3 170 57.6
ECA247G1960 Erigeron canadensis HOM05D005188 ORTHO05D006153 2.0e-44 182.6 167 59.3
PSO675G9377 Papaver somniferum HOM05D005188 ORTHO05D006153 2.0e-44 182.6 165 55.2
Sabra07G0086700 Salix brachista HOM05D005188 ORTHO05D006153 3.3e-44 181.8 170 58.2
RcHm_v2.0_Chr2g0120891 Rosa chinensis HOM05D005188 ORTHO05D006153 4.4e-44 181.4 163 60.1
VMungo0251G2948 Vigna mungo HOM05D005188 ORTHO05D006153 4.4e-44 181.4 172 56.4
TPR.G18740 Trifolium pratense HOM05D005188 ORTHO05D006153 5.7e-44 181.0 112 79.5
Gorai.003G066700 Gossypium raimondii HOM05D005188 ORTHO05D006153 7.5e-44 180.6 182 56.6
Psat5g063680 Pisum sativum HOM05D005188 ORTHO05D006153 7.5e-44 180.6 171 57.3
DCAR_001211 Daucus carota HOM05D005188 ORTHO05D006153 9.7e-44 180.3 169 59.8
FAN26G2437 Fragaria x ananassa HOM05D002517 ORTHO05D006153 9.7e-44 180.3 163 62.0
Nitab4.5_0000673g0170 Nicotiana tabacum HOM05D005188 ORTHO05D006153 9.7e-44 180.3 169 58.6
Atru.chr4.905 Acer truncatum HOM05D005188 ORTHO05D006153 1.3e-43 179.9 169 55.6
ATR0987G005 Amborella trichopoda HOM05D005188 ORTHO05D006153 1.7e-43 179.5 178 55.1
BolC9t53875H Brassica oleracea HOM05D005188 ORTHO05D006153 1.7e-43 179.5 123 71.5
CDE02G4401 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 2.2e-43 179.1 172 58.1
THA.LOC104800083 Tarenaya hassleriana HOM05D005188 ORTHO05D006153 2.2e-43 179.1 91 87.9
Zm00001eb409220 Zea mays HOM05D005188 ORTHO05D006153 6.3e-43 177.6 127 66.1
Os12g0189400 Oryza sativa ssp. japonica HOM05D005188 ORTHO05D006153 1.4e-42 176.4 110 75.5
vmacro12795 Vaccinium macrocarpon HOM05D005188 ORTHO05D006153 4.1e-42 174.9 114 73.7
Zm00001eb138650 Zea mays HOM05D005188 ORTHO05D006153 5.3e-42 174.5 128 69.5
SEGI_16120 Sequoiadendron giganteum HOM05D005188 ORTHO05D006153 1.6e-38 162.9 112 65.2
BolC3t18491H Brassica oleracea HOM05D005188 ORTHO05D006153 3.6e-38 161.8 175 52.6
A09p08510 Brassica napus HOM05D005188 ORTHO05D006153 2.4e-34 149.1 112 66.1
BraA09t36500Z Brassica rapa HOM05D005188 ORTHO05D006153 2.4e-34 149.1 112 66.1
SMO144G0055 Selaginella moellendorffii HOM05D005188 ORTHO05D006153 6.5e-32 141.0 82 74.4
BcaB04g17222 Brassica carinata HOM05D005188 ORTHO05D006153 1.6e-30 136.3 121 59.5
BcaB08g36594 Brassica carinata HOM05D005188 ORTHO05D006153 4.7e-30 134.8 74 87.8
BcaC04g18786 Brassica carinata HOM05D005188 ORTHO05D006153 1.0e-29 133.7 74 87.8
BolC2t07163H Brassica oleracea HOM05D005188 ORTHO05D006153 1.4e-29 133.3 74 86.5
BolC7t41311H Brassica oleracea HOM05D005188 ORTHO05D006153 1.8e-29 132.9 72 88.9
Sc16g0003820 Simmondsia chinensis HOM05D005188 ORTHO05D006153 1.5e-28 129.8 141 54.6
C03p62290 Brassica napus HOM05D005188 ORTHO05D006153 7.5e-28 127.5 141 52.5
BraA06t26017Z Brassica rapa HOM05D005188 ORTHO05D006153 1.7e-27 126.3 82 75.6
Duzib264G0557 Durio zibethinus HOM05D005188 ORTHO05D006153 2.2e-27 125.9 145 54.5
Duzib147G0711 Durio zibethinus HOM05D005188 ORTHO05D006153 3.7e-27 125.2 145 52.4
Eucgr.I00200 Eucalyptus grandis HOM05D005188 ORTHO05D006153 2.4e-26 122.5 139 52.5
Mapoly0116s0042 Marchantia polymorpha HOM05D005188 ORTHO05D006153 5.4e-26 121.3 123 52.0
Cre02.g082500 Chlamydomonas reinhardtii HOM05D005188 ORTHO05D006153 4.3e-23 111.7 115 53.9
AagrBONN_evm.TU.Sc2ySwM_362.2803 Anthoceros agrestis HOM05D005188 ORTHO05D006153 6.1e-22 107.8 94 62.8
BcaC03g13890 Brassica carinata HOM05D005188 ORTHO05D006153 8.9e-21 104.0 74 70.3
AUR62003566 Chenopodium quinoa HOM05D005188 ORTHO05D006153 7.0e-18 94.4 167 38.9
CBR_g45633 Chara braunii HOM05D005188 ORTHO05D006153 1.7e-16 89.7 98 52.0
PRCOL_00004565 Prasinoderma coloniale HOM05D005188 ORTHO05D006153 2.1e-14 82.8 70 55.7
Duzib187G0538 Durio zibethinus HOM05D005188 ORTHO05D006153 3.6e-14 82.0 128 44.5
MCO09G058 Micromonas commoda HOM05D005188 ORTHO05D006153 8.0e-14 80.9 107 43.0
C02p10930 Brassica napus HOM05D005188 ORTHO05D006153 5.0e-08 61.6 30 86.7
Nitab4.5_0005544g0070 Nicotiana tabacum HOM05D005188 ORTHO05D006153 9.5e-07 57.4 105 39.0
BraA02t09233Z Brassica rapa HOM05D005188 ORTHO05D006153 8.1e-06 54.3 113 37.2


User provided reference genes

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