Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050039.1 Olea europaea HOM05D003801 ORTHO05D004812 0.0e+00 1090.9 549 100.0
Oeu044915.1 Olea europaea HOM05D003801 ORTHO05D004812 1.9e-157 560.1 567 61.4
CSS0002946 Camellia sinensis var. sinensis HOM05D003801 ORTHO05D004812 1.2e-122 444.5 560 51.4
MSTRG.17901 Avicennia marina HOM05D003801 ORTHO05D004812 1.5e-122 444.1 560 52.1
MSTRG.18544 Avicennia marina HOM05D003801 ORTHO05D004812 2.0e-122 443.7 570 50.9
Migut.D00836 Erythranthe guttata HOM05D003801 ORTHO05D004812 1.6e-119 434.1 563 50.4
Cc01_g15070 Coffea canephora HOM05D003801 ORTHO05D004812 1.9e-117 427.2 569 49.6
Nitab4.5_0004637g0060 Nicotiana tabacum HOM05D003801 ORTHO05D004812 2.9e-113 413.3 571 48.2
Hma1.2p1_1637F.1_g294880 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 3.8e-113 412.9 563 47.1
GSVIVG01024601001 Vitis vinifera HOM05D003801 ORTHO05D004812 8.5e-113 411.8 560 48.8
Hma1.2p1_1421F.1_g282490 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 2.5e-112 410.2 555 46.5
Nitab4.5_0000486g0130 Nicotiana tabacum HOM05D003801 ORTHO05D004812 3.2e-112 409.8 564 47.9
Nitab4.5_0004906g0050 Nicotiana tabacum HOM05D003801 ORTHO05D004812 9.4e-112 408.3 566 48.4
Actinidia32598 Actinidia chinensis HOM05D003801 ORTHO05D004812 2.7e-111 406.8 565 48.5
Lj1A123G49 Lonicera japonica HOM05D003801 ORTHO05D004812 7.9e-111 405.2 563 49.0
SGA_v2.0_scaffold20G09298 Striga asiatica HOM05D003801 ORTHO05D004812 6.3e-108 395.6 558 47.3
Peaxi162Scf00095g00168 Petunia axillaris HOM05D003801 ORTHO05D004812 8.2e-108 395.2 555 46.7
ECA247G0395 Erigeron canadensis HOM05D003801 ORTHO05D004812 1.8e-107 394.0 566 46.6
Nn5g27878 Nelumbo nucifera HOM05D003801 ORTHO05D004812 6.9e-107 392.1 560 46.1
Solyc09g031780.3 Solanum lycopersicum HOM05D003801 ORTHO05D004812 2.0e-106 390.6 552 46.0
Sopen09g014770 Solanum pennellii HOM05D003801 ORTHO05D004812 4.5e-106 389.4 559 45.6
Dinv12255 Davidia involucrata HOM05D003801 ORTHO05D004812 5.0e-105 386.0 561 45.8
TAR369G0201 Trochodendron aralioides HOM05D003801 ORTHO05D004812 2.5e-104 383.6 531 47.1
Lsat_1_v5_gn_9_14381 Lactuca sativa HOM05D003801 ORTHO05D004812 3.2e-104 383.3 568 46.3
CAN.G1702.5 Capsicum annuum HOM05D003801 ORTHO05D004812 7.2e-104 382.1 560 46.4
Cfa011800 Carpinus fangiana HOM05D003801 ORTHO05D004812 7.2e-104 382.1 564 44.3
HanXRQChr08g0228441 Helianthus annuus HOM05D003801 ORTHO05D004812 1.6e-103 380.9 583 46.5
CsaV3_1G036690 Cucumis sativus L. HOM05D003801 ORTHO05D004812 2.1e-103 380.6 567 44.1
Sed0013919 Sechium edule HOM05D003801 ORTHO05D004812 2.1e-103 380.6 564 44.9
Haze_24439 Corylus avellana HOM05D003801 ORTHO05D004812 2.7e-103 380.2 564 44.3
MD03G1058800 Malus domestica HOM05D003801 ORTHO05D004812 1.8e-102 377.5 563 43.9
Prupe.6G045000 Prunus persica HOM05D003801 ORTHO05D004812 3.9e-102 376.3 563 43.9
TWI79G0650 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 6.7e-102 375.6 556 43.7
ClCG03G000210 Citrullus lanatus HOM05D003801 ORTHO05D004812 8.8e-102 375.2 597 41.7
RcHm_v2.0_Chr5g0072271 Rosa chinensis HOM05D003801 ORTHO05D004812 1.5e-101 374.4 562 44.7
Nn1g08532 Nelumbo nucifera HOM05D003801 ORTHO05D004812 2.0e-101 374.0 547 45.2
unitig_747.g21451 Utricularia gibba HOM05D003801 ORTHO05D004812 2.0e-101 374.0 529 47.4
COL.COLO4_11183 Corchorus olitorius HOM05D003801 ORTHO05D004812 2.6e-101 373.6 567 44.4
Manes.18G140750 Manihot esculenta HOM05D003801 ORTHO05D004812 2.6e-101 373.6 565 43.9
Potri.019G127000 Populus trichocarpa HOM05D003801 ORTHO05D004812 2.6e-101 373.6 560 44.3
MD11G1060900 Malus domestica HOM05D003801 ORTHO05D004812 4.4e-101 372.9 556 44.4
Sabra19G0125000 Salix brachista HOM05D003801 ORTHO05D004812 7.4e-101 372.1 568 43.7
CiPaw.13G066600 Carya illinoinensis HOM05D003801 ORTHO05D004812 1.3e-100 371.3 573 43.1
TWI75G1891 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 1.3e-100 371.3 556 44.6
Rhsim13G0062300 Rhododendron simsii HOM05D003801 ORTHO05D004812 2.2e-100 370.5 518 46.7
Sc17g0002560 Simmondsia chinensis HOM05D003801 ORTHO05D004812 2.8e-100 370.2 564 45.4
TAR623G1445 Trochodendron aralioides HOM05D003801 ORTHO05D004812 2.8e-100 370.2 558 44.6
DCAR_028861 Daucus carota HOM05D003801 ORTHO05D004812 3.7e-100 369.8 557 45.8
Cpa.g.sc173.16 Carica papaya HOM05D003801 ORTHO05D004812 1.1e-99 368.2 562 43.6
Sabra19G0130000 Salix brachista HOM05D003801 ORTHO05D004812 2.4e-99 367.1 566 43.5
Duzib168G2305 Durio zibethinus HOM05D003801 ORTHO05D004812 3.1e-99 366.7 560 43.8
CANSAT54G0450 Cannabis sativa HOM05D003801 ORTHO05D004812 5.3e-99 365.9 565 44.1
Potri.013G154300 Populus trichocarpa HOM05D003801 ORTHO05D004812 5.3e-99 365.9 558 43.2
Ciclev10000209m.g Citrus clementina HOM05D003801 ORTHO05D004812 7.0e-99 365.5 558 43.5
ATR0584G141 Amborella trichopoda HOM05D003801 ORTHO05D004812 1.5e-98 364.4 560 43.0
Atru.chr1.2566 Acer truncatum HOM05D003801 ORTHO05D004812 2.0e-98 364.0 553 43.2
vmacro02901 Vaccinium macrocarpon HOM05D003801 ORTHO05D004812 2.6e-98 363.6 569 44.3
Thecc.09G360800 Theobroma cacao HOM05D003801 ORTHO05D004812 1.3e-97 361.3 567 43.2
FvH4_3g40080 Fragaria vesca HOM05D003801 ORTHO05D004812 3.8e-97 359.8 562 43.4
PSO384G0852 Papaver somniferum HOM05D003801 ORTHO05D004812 5.0e-97 359.4 532 43.4
Sabra13G0124100 Salix brachista HOM05D003801 ORTHO05D004812 1.1e-96 358.2 572 41.6
Lj1A124T30 Lonicera japonica HOM05D003801 ORTHO05D004812 1.9e-96 357.5 572 43.5
PSO339G1799 Papaver somniferum HOM05D003801 ORTHO05D004812 7.2e-96 355.5 532 43.2
Psat2g052760 Pisum sativum HOM05D003801 ORTHO05D004812 2.7e-95 353.6 556 43.0
Aqoxy2G00749 Aquilegia oxysepala HOM05D003801 ORTHO05D004812 3.6e-95 353.2 574 41.5
Gohir.D03G144200 Gossypium hirsutum HOM05D003801 ORTHO05D004812 3.6e-95 353.2 567 42.7
Gorai.003G151500 Gossypium raimondii HOM05D003801 ORTHO05D004812 6.1e-95 352.4 565 42.7
FAN21G1607 Fragaria x ananassa HOM05D003801 ORTHO05D004812 1.8e-94 350.9 583 41.7
Gohir.A03G024300 Gossypium hirsutum HOM05D003801 ORTHO05D004812 2.3e-94 350.5 564 42.6
Hund05047 Selenicereus undatus HOM05D003801 ORTHO05D004812 2.3e-94 350.5 488 45.1
PGR004G1069 Punica granatum HOM05D003801 ORTHO05D004812 3.0e-94 350.1 559 41.5
FAN11G2663 Fragaria x ananassa HOM05D003801 ORTHO05D004812 2.6e-93 347.1 584 41.8
FAN16G2780 Fragaria x ananassa HOM05D003801 ORTHO05D004812 3.3e-93 346.7 595 41.3
Eucgr.B04013 Eucalyptus grandis HOM05D003801 ORTHO05D004812 4.4e-93 346.3 493 44.2
EL10Ac7g15867 Beta vulgaris HOM05D003801 ORTHO05D004812 5.7e-93 345.9 540 43.5
Glyma.14G201500 Glycine max HOM05D003801 ORTHO05D004812 9.7e-93 345.1 556 42.6
CDE04G3388 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 3.7e-92 343.2 528 42.4
QL01p018072 Quercus lobata HOM05D003801 ORTHO05D004812 3.7e-92 343.2 560 41.6
Lalb_Chr10g0103681 Lupinus albus HOM05D003801 ORTHO05D004812 6.3e-92 342.4 555 42.3
FAN25G2625 Fragaria x ananassa HOM05D003801 ORTHO05D004812 1.4e-91 341.3 583 41.0
Medtr5g074690 Medicago truncatula HOM05D003801 ORTHO05D004812 1.8e-91 340.9 553 43.0
Thhalv10006671m.g Eutrema salsugineum HOM05D003801 ORTHO05D004812 2.0e-90 337.4 569 40.9
Carub.0001s0624 Capsella rubella HOM05D003801 ORTHO05D004812 2.6e-90 337.0 530 42.1
AUR62036227 Chenopodium quinoa HOM05D003801 ORTHO05D004812 3.5e-90 336.7 542 41.1
LjContig00141g0011314 Lotus japonicus HOM05D003801 ORTHO05D004812 4.5e-90 336.3 554 42.1
VMungo0647G2088 Vigna mungo HOM05D003801 ORTHO05D004812 4.5e-90 336.3 559 40.8
Glyma.02G233700 Glycine max HOM05D003801 ORTHO05D004812 1.3e-89 334.7 556 41.5
Ca_05689_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 2.2e-89 334.0 558 41.0
CARHR006620 Cardamine hirsuta HOM05D003801 ORTHO05D004812 3.8e-89 333.2 530 41.1
AT1G06950 Arabidopsis thaliana HOM05D003801 ORTHO05D004812 1.1e-88 331.6 578 39.8
Phvul.008G250000 Phaseolus vulgaris HOM05D003801 ORTHO05D004812 1.1e-88 331.6 553 41.8
Sp1g05660 Schrenkiella parvula HOM05D003801 ORTHO05D004812 7.2e-88 328.9 575 40.3
A08p35840 Brassica napus HOM05D003801 ORTHO05D004812 1.6e-87 327.8 573 39.6
AL1G16990 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 2.7e-87 327.0 579 39.4
BraA08t35491Z Brassica rapa HOM05D003801 ORTHO05D004812 2.7e-87 327.0 573 39.3
Psat5g150840 Pisum sativum HOM05D003801 ORTHO05D004812 8.0e-87 325.5 493 43.2
C08p02740 Brassica napus HOM05D003801 ORTHO05D004812 1.4e-86 324.7 573 39.1
Aa31LG5G6380 Aethionema arabicum HOM05D003801 ORTHO05D004812 2.3e-86 323.9 573 39.4
Glyma.18G055700 Glycine max HOM05D003801 ORTHO05D004812 3.0e-86 323.6 488 42.0
arahy.Tifrunner.gnm1.ann1.Z7TKRX Arachis hypogaea HOM05D003801 ORTHO05D004812 4.0e-86 323.2 627 37.6
AUR62009720 Chenopodium quinoa HOM05D003801 ORTHO05D004812 2.6e-85 320.5 475 43.4
TPR.G24942 Trifolium pratense HOM05D003801 ORTHO05D004812 9.8e-85 318.5 499 42.3
BolC5t29277H Brassica oleracea HOM05D003801 ORTHO05D004812 1.7e-84 317.8 516 40.9
Medtr3g466170 Medicago truncatula HOM05D003801 ORTHO05D004812 2.8e-84 317.0 492 42.9
BcaC05g24660 Brassica carinata HOM05D003801 ORTHO05D004812 3.7e-84 316.6 516 40.7
BraA10t42811Z Brassica rapa HOM05D003801 ORTHO05D004812 4.8e-84 316.2 515 40.8
BcaB03g13435 Brassica carinata HOM05D003801 ORTHO05D004812 2.2e-81 307.4 492 40.7
Ca_13017_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 5.0e-81 306.2 427 46.4
Cc01_g14930 Coffea canephora HOM05D003801 ORTHO05D004812 1.0e-78 298.5 362 50.6
A10p05480 Brassica napus HOM05D003801 ORTHO05D004812 1.4e-78 298.1 525 38.7
TPR.G17744 Trifolium pratense HOM05D003801 ORTHO05D004812 4.0e-78 296.6 383 46.0
BolC8t47069H Brassica oleracea HOM05D003801 ORTHO05D004812 6.3e-76 289.3 600 36.0
SEGI_40714 Sequoiadendron giganteum HOM05D003801 ORTHO05D004812 6.3e-76 289.3 531 38.2
C05p05030 Brassica napus HOM05D001129 ORTHO05D003814 1.7e-68 264.6 374 42.8
Pp3c17_6540 Physcomitrium patens HOM05D003801 ORTHO05D004812 1.2e-66 258.5 513 35.5
Zm00001eb044910 Zea mays HOM05D003801 ORTHO05D004812 8.6e-65 252.3 499 35.9
SMO347G0592 Selaginella moellendorffii HOM05D003801 ORTHO05D004812 2.1e-63 247.7 510 35.1
Dinv28708 Davidia involucrata HOM05D003801 ORTHO05D004812 2.2e-60 237.7 323 47.1
Atru.chr1.2574 Acer truncatum HOM05D003801 ORTHO05D004812 6.4e-60 236.1 330 45.5
CBR_g29785 Chara braunii HOM05D003801 ORTHO05D004812 1.1e-59 235.3 515 35.3
Mapoly0002s0142 Marchantia polymorpha HOM05D003801 ORTHO05D004812 1.9e-59 234.6 534 33.3
HPP92_014542 Vanilla planifolia HOM05D003801 ORTHO05D004812 3.0e-57 227.3 351 42.7
MELO3C020500.2 Cucumis melo HOM05D003801 ORTHO05D004812 6.8e-54 216.1 323 44.0
Eucgr.I01027 Eucalyptus grandis HOM05D003801 ORTHO05D004812 1.7e-52 211.5 323 40.9
MBI15_g33038_MAGBIO Magnolia biondii HOM05D003801 ORTHO05D004812 1.2e-50 205.3 233 52.4
Actinidia23184 Actinidia chinensis HOM05D003801 ORTHO05D004812 1.3e-49 201.8 240 47.1
MBI07_g35968_MAGBIO Magnolia biondii HOM05D003801 ORTHO05D004812 3.0e-49 200.7 199 57.3
Lj6A615T90 Lonicera japonica HOM05D003801 ORTHO05D004812 2.1e-47 194.5 404 36.6
Os10g0492300 Oryza sativa ssp. japonica HOM05D003801 ORTHO05D004812 1.8e-46 191.4 366 36.1
Sabra19G0124700 Salix brachista HOM05D003801 ORTHO05D004812 4.0e-46 190.3 250 47.6
Os10g0492000 Oryza sativa ssp. japonica HOM05D003801 ORTHO05D004812 2.9e-44 184.1 343 38.2
Sabra19G0125300 Salix brachista HOM05D003801 ORTHO05D004812 2.4e-43 181.0 240 47.1
Sabra19G0124600 Salix brachista HOM05D003801 ORTHO05D004812 4.3e-40 170.2 268 44.4
PSO339G0950 Papaver somniferum HOM05D003801 ORTHO05D004812 1.8e-38 164.9 251 40.6
Cc01_g14920 Coffea canephora HOM05D003801 ORTHO05D004812 2.4e-27 127.9 191 48.7
PRCOL_00000154 Prasinoderma coloniale HOM05D003801 ORTHO05D004812 1.2e-26 125.6 496 27.4
Sabra19G0125200 Salix brachista HOM05D003801 ORTHO05D004812 1.9e-24 118.2 259 35.5
PSO339G3141 Papaver somniferum HOM05D003801 ORTHO05D004812 3.1e-22 110.9 212 36.8
SHI19239 Sapria himalayana HOM05D003801 ORTHO05D004812 1.5e-21 108.6 259 33.6
Hma1.2p1_1586F.1_g292120 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 2.6e-21 107.8 140 50.7
Cre10.g452450 Chlamydomonas reinhardtii HOM05D003801 ORTHO05D004812 3.4e-21 107.5 489 25.4
Pp3c14_10270 Physcomitrium patens HOM05D003801 ORTHO05D004812 7.6e-21 106.3 219 35.6
CANSAT80G1859 Cannabis sativa HOM05D003801 ORTHO05D004812 2.9e-20 104.4 137 43.8
CDE07G0033 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 3.5e-18 97.4 203 36.9
HPP92_014541 Vanilla planifolia HOM05D003801 ORTHO05D004812 4.6e-18 97.1 203 35.5
SHI19242 Sapria himalayana HOM05D003801 ORTHO05D004812 3.0e-17 94.4 104 47.1
MCO16G620 Micromonas commoda HOM05D003801 ORTHO05D004812 2.8e-15 87.8 386 22.5
CDE07G0490 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 1.8e-14 85.1 145 39.3
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 2.6e-13 81.3 53 67.9
BcaB02g06769 Brassica carinata HOM05D003801 ORTHO05D004812 4.9e-12 77.0 224 30.8
Sabra19G0125100 Salix brachista HOM05D003801 ORTHO05D004812 1.3e-09 68.9 37 83.8
TAR629G1141 Trochodendron aralioides HOM05D000566 ORTHO05D000686 1.1e-08 65.9 38 76.3
CSS0035288 Camellia sinensis var. sinensis HOM05D003801 ORTHO05D004812 4.3e-08 63.9 36 83.3
COL.COLO4_07614 Corchorus olitorius HOM05D003801 ORTHO05D004812 2.1e-07 61.6 42 69.0
TAR624G1267 Trochodendron aralioides HOM05D004621 ORTHO05D005817 2.8e-07 61.2 36 75.0
Lj6A615T91 Lonicera japonica HOM05D003801 ORTHO05D004812 9.0e-06 56.2 38 65.8


User provided reference genes

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