Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 9.1e-167 590.1 289 100.0
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 2.1e-123 446.0 334 68.0
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 8.1e-123 444.1 338 66.3
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 2.6e-121 439.1 336 67.0
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 6.4e-120 434.5 334 67.7
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 8.4e-120 434.1 336 65.2
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 2.7e-118 429.1 338 63.0
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 2.3e-117 426.0 342 64.0
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 8.7e-117 424.1 338 65.7
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.6e-115 419.9 336 63.1
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 2.8e-115 419.1 338 63.6
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 3.6e-115 418.7 336 63.4
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 3.6e-115 418.7 333 63.4
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 4.8e-115 418.3 336 62.8
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.2e-115 417.9 335 64.5
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 8.1e-115 417.5 335 64.2
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.1e-114 417.2 336 64.6
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 4.0e-114 415.2 337 61.1
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 6.9e-114 414.5 338 62.1
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.2e-113 413.7 333 62.5
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.2e-113 413.7 327 64.5
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 4.5e-113 411.8 336 61.9
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.8e-113 411.4 336 62.2
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 5.8e-113 411.4 332 64.2
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 7.6e-113 411.0 330 63.3
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 9.9e-113 410.6 336 61.9
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 9.9e-113 410.6 336 61.9
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 2.2e-112 409.5 335 63.3
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 2.9e-112 409.1 336 62.5
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 4.9e-112 408.3 333 63.1
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 4.9e-112 408.3 324 62.3
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 8.4e-112 407.5 338 62.1
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.9e-111 406.4 331 61.6
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 3.2e-111 405.6 334 63.2
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 5.4e-111 404.8 337 60.2
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 7.1e-111 404.4 340 60.6
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 2.7e-110 402.5 335 60.3
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 7.9e-110 401.0 335 61.5
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 1.0e-109 400.6 333 62.8
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 2.3e-109 399.4 336 61.0
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.0e-109 399.1 311 67.2
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 3.9e-109 398.7 330 60.0
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 8.7e-109 397.5 335 61.5
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 8.7e-109 397.5 324 61.1
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 1.5e-108 396.7 333 62.2
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.5e-108 396.7 340 60.6
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.5e-108 396.7 333 59.2
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 2.5e-108 396.0 333 61.6
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 3.3e-108 395.6 333 60.7
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.3e-108 395.6 330 62.7
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 4.3e-108 395.2 336 61.3
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 5.6e-108 394.8 333 59.5
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 9.6e-108 394.0 323 61.0
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 1.3e-107 393.7 338 59.2
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.6e-107 393.3 321 61.4
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.7e-107 392.1 335 62.4
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 4.8e-107 391.7 333 62.2
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 6.2e-107 391.3 333 58.9
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.8e-106 389.8 333 61.9
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 2.4e-106 389.4 335 57.3
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 3.1e-106 389.0 326 61.0
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 9.0e-106 387.5 336 60.4
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 9.0e-106 387.5 329 58.7
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.5e-105 386.7 335 57.9
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.6e-105 386.0 336 59.2
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.3e-104 383.6 332 58.4
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 5.5e-103 378.3 335 59.1
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 9.3e-103 377.5 339 56.9
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.3e-101 372.9 338 56.8
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 2.3e-101 372.9 332 56.6
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 3.9e-101 372.1 317 57.4
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 5.6e-100 368.2 338 56.5
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.3e-99 367.1 313 58.1
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.1e-99 366.3 310 60.0
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 3.7e-99 365.5 313 57.2
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 3.7e-99 365.5 313 57.2
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 4.8e-99 365.2 341 54.8
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 6.2e-99 364.8 313 57.2
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 6.2e-99 364.8 313 57.2
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 6.2e-99 364.8 313 57.2
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.1e-98 364.0 340 54.7
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 4.0e-98 362.1 316 57.6
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.5e-97 360.1 333 55.9
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.6e-97 359.4 328 56.7
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 7.6e-97 357.8 333 58.0
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 9.3e-95 350.9 336 53.0
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 7.9e-94 347.8 338 52.7
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 5.1e-93 345.1 316 54.4
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.5e-92 343.6 334 54.5
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 9.7e-76 287.7 313 47.6
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.2e-75 286.6 308 48.1
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.8e-74 283.5 318 49.1
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.2e-70 270.8 296 48.6
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.3e-68 262.7 146 83.6
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.1e-66 255.8 145 80.7
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 4.2e-63 245.7 316 42.7
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 9.4e-63 244.6 307 44.0
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.4e-61 240.7 143 79.0
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 2.3e-61 240.0 142 76.1
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.4e-60 236.1 135 81.5
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 5.7e-60 235.3 303 42.2
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.8e-58 230.3 143 72.7
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 5.0e-56 222.2 261 46.4
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.5e-49 199.5 149 67.1
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 1.1e-47 194.5 215 51.6
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.1e-47 194.5 131 75.6
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 2.8e-43 179.9 202 49.0
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.1e-42 176.0 144 65.3
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 6.6e-40 168.7 257 42.0
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 2.1e-38 163.7 90 81.1
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.1e-34 149.4 275 34.9
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.0e-33 147.1 135 53.3
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.0e-28 130.6 127 55.9
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.7e-27 127.5 108 58.3
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 4.0e-21 106.3 201 35.8
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.9e-19 100.1 72 68.1


User provided reference genes

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