Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 7.3e-258 893.6 545 100.0
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 8.5e-89 332.0 328 60.7
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 6.5e-81 305.8 423 46.6
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 1.1e-64 251.9 346 47.7
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 4.2e-64 250.0 437 41.0
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 2.7e-63 247.3 375 44.5
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 4.7e-63 246.5 257 50.2
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 1.4e-62 245.0 223 55.6
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 2.0e-61 241.1 252 50.8
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 2.6e-61 240.7 430 39.8
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 4.4e-61 240.0 445 39.8
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 7.5e-61 239.2 412 39.8
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 9.7e-61 238.8 240 53.3
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 4.1e-59 233.4 197 59.9
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 1.2e-58 231.9 454 37.9
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 3.5e-58 230.3 444 39.9
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 4.5e-58 229.9 342 45.0
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 1.3e-57 228.4 468 39.1
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 3.8e-57 226.9 198 62.1
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 5.0e-57 226.5 434 39.4
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 1.9e-56 224.6 399 38.1
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 3.2e-56 223.8 362 43.1
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 3.2e-56 223.8 350 42.9
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 3.2e-56 223.8 350 42.9
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 7.2e-56 222.6 423 37.4
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 1.2e-55 221.9 370 41.1
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 2.1e-55 221.1 478 39.1
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 2.7e-55 220.7 427 40.7
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 2.7e-55 220.7 419 38.7
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 4.7e-55 219.9 410 41.2
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 4.0e-54 216.9 270 44.4
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 3.4e-53 213.8 365 39.2
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 4.4e-53 213.4 421 38.2
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 3.7e-52 210.3 406 37.9
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 1.1e-51 208.8 447 37.8
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 2.4e-51 207.6 400 40.5
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 5.4e-51 206.5 265 44.9
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 7.0e-51 206.1 236 49.6
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 1.2e-50 205.3 284 44.7
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 7.7e-50 202.6 283 44.2
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 7.2e-48 196.1 420 36.2
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 1.2e-47 195.3 382 38.2
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 1.6e-47 194.9 411 37.7
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.8e-46 191.4 366 36.3
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 8.9e-46 189.1 375 37.1
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 4.4e-45 186.8 450 34.9
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 5.7e-45 186.4 366 35.8
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 1.7e-44 184.9 268 44.0
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 6.3e-44 183.0 427 35.1
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 1.4e-43 181.8 366 36.9
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 9.2e-43 179.1 419 32.9
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 9.2e-43 179.1 414 35.3
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 1.5e-40 171.8 360 39.2
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 1.6e-39 168.3 434 30.4
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 2.1e-39 167.9 257 42.4
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 3.6e-39 167.2 223 42.2
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 8.0e-39 166.0 203 45.3
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 2.3e-38 164.5 386 37.0
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 2.3e-38 164.5 278 38.5
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 6.8e-38 162.9 377 33.7
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 1.2e-37 162.2 247 41.3
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 1.2e-37 162.2 421 31.6
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 2.6e-37 161.0 209 44.0
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 3.4e-37 160.6 262 43.1
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 5.8e-37 159.8 206 45.1
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 5.8e-37 159.8 206 45.1
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 9.8e-37 159.1 236 40.7
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 9.8e-37 159.1 458 31.0
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 3.7e-36 157.1 210 44.3
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 4.9e-36 156.8 338 34.9
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 6.4e-36 156.4 221 43.9
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 6.4e-36 156.4 192 47.9
TAR376G0700 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.4e-35 155.2 377 33.2
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 4.1e-35 153.7 371 32.9
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 5.4e-35 153.3 251 40.6
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 5.4e-35 153.3 253 40.7
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 2.7e-34 151.0 257 38.5
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 3.5e-34 150.6 264 38.6
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 4.6e-34 150.2 237 44.3
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 7.8e-34 149.4 419 32.5
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 6.6e-33 146.4 226 40.3
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 7.3e-32 142.9 373 31.1
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 9.5e-32 142.5 195 45.1
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 2.8e-31 141.0 402 33.6
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 1.1e-30 139.0 332 34.0
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 1.1e-30 139.0 177 48.6
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 3.1e-30 137.5 257 38.1
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 5.2e-30 136.7 232 39.7
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 1.5e-29 135.2 210 38.6
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 1.3e-28 132.1 448 29.7
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 1.3e-28 132.1 359 32.6
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 2.2e-28 131.3 240 39.6
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 4.9e-28 130.2 427 28.6
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 4.1e-27 127.1 448 28.6
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 7.1e-27 126.3 299 35.8
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 7.1e-27 126.3 225 39.6
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 1.2e-26 125.6 184 42.4
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 2.7e-26 124.4 398 30.4
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 4.6e-26 123.6 234 35.9
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 7.8e-26 122.9 358 33.2
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 6.6e-25 119.8 210 36.7
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 3.3e-24 117.5 240 38.8
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 5.6e-24 116.7 245 36.7
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 7.3e-24 116.3 301 32.9
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 9.5e-24 115.9 306 30.7
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 9.5e-24 115.9 409 30.6
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 9.5e-24 115.9 328 32.6
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 2.3e-22 111.3 269 34.2
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 6.8e-22 109.8 322 31.1
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 8.9e-22 109.4 196 38.3
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 1.2e-21 109.0 429 29.1
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 2.0e-21 108.2 259 33.6
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 4.4e-21 107.1 275 33.1
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 5.8e-21 106.7 212 37.3
Nn5g29644 Nelumbo nucifera HOM05D006278 ORTHO05D007526 9.9e-21 105.9 400 28.2
Nitab4.5_0003711g0040 Nicotiana tabacum HOM05D006278 ORTHO05D007526 4.1e-19 100.5 126 44.4
CDE04G1483 Ceratophyllum demersum HOM05D003484 ORTHO05D004152 1.1e-16 92.4 265 29.4
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 4.3e-16 90.5 346 30.6
Gohir.A03G079100 Gossypium hirsutum HOM05D000342 ORTHO05D000217 4.3e-16 90.5 182 37.4
Gohir.D02G095000 Gossypium hirsutum HOM05D000342 ORTHO05D000217 4.7e-15 87.0 258 32.9
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 3.1e-14 84.3 173 39.9
Gorai.005G108300 Gossypium raimondii HOM05D000342 ORTHO05D000217 1.2e-13 82.4 261 32.6
SEGI_20460 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 2.7e-10 71.2 169 36.1
EL10Ac1g00218 Beta vulgaris HOM05D004242 ORTHO05D004349 3.5e-10 70.9 112 43.8
DCAR_020977 Daucus carota HOM05D006278 ORTHO05D007526 3.5e-10 70.9 364 27.5
ATR0796G195 Amborella trichopoda HOM05D004242 ORTHO05D004349 4.6e-10 70.5 155 33.5
Gohir.A11G099300 Gossypium hirsutum HOM05D004242 ORTHO05D004349 1.0e-09 69.3 112 39.3
Lalb_Chr15g0076401 Lupinus albus HOM05D004242 ORTHO05D004349 1.3e-09 68.9 112 40.2
DCAR_019537 Daucus carota HOM05D006278 ORTHO05D007526 3.9e-09 67.4 388 25.5
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 5.1e-09 67.0 108 38.0
AUR62004535 Chenopodium quinoa HOM05D004242 ORTHO05D004349 1.9e-08 65.1 112 38.4
Gohir.D11G103800 Gossypium hirsutum HOM05D004242 ORTHO05D004349 1.9e-08 65.1 112 37.5
Gorai.007G111100 Gossypium raimondii HOM05D004242 ORTHO05D004349 1.9e-08 65.1 112 37.5
Nitab4.5_0005697g0010 Nicotiana tabacum HOM05D004242 ORTHO05D004349 1.9e-08 65.1 105 38.1
Nitab4.5_0000508g0190 Nicotiana tabacum HOM05D004242 ORTHO05D004349 2.5e-08 64.7 105 38.1
PSO210G2709 Papaver somniferum HOM05D004242 ORTHO05D004349 2.5e-08 64.7 121 36.4
Zm00001eb309990 Zea mays HOM05D065992 ORTHO05D037126 3.3e-08 64.3 255 28.2
arahy.Tifrunner.gnm1.ann1.16GZH2 Arachis hypogaea HOM05D004242 ORTHO05D004349 4.3e-08 63.9 107 38.3
Oeu004972.1 Olea europaea HOM05D004242 ORTHO05D004349 4.3e-08 63.9 104 37.5
arahy.Tifrunner.gnm1.ann1.1EJ222 Arachis hypogaea HOM05D004242 ORTHO05D004349 5.6e-08 63.5 106 36.8
AUR62022719 Chenopodium quinoa HOM05D004242 ORTHO05D004349 5.6e-08 63.5 116 36.2
CiPaw.02G043100 Carya illinoinensis HOM05D004242 ORTHO05D004349 7.3e-08 63.2 107 35.5
QL08p046281 Quercus lobata HOM05D004242 ORTHO05D004349 9.6e-08 62.8 109 38.5
Peaxi162Scf00014g00294 Petunia axillaris HOM05D004242 ORTHO05D004349 1.3e-07 62.4 104 36.5
ClCG06G002780 Citrullus lanatus HOM05D004242 ORTHO05D004349 2.1e-07 61.6 118 32.2
Actinidia25370 Actinidia chinensis HOM05D004242 ORTHO05D004349 3.6e-07 60.8 167 31.7
Ah.05g179200 Amaranthus hybridus HOM05D004242 ORTHO05D004349 3.6e-07 60.8 108 37.0
Potri.002G175400 Populus trichocarpa HOM05D004242 ORTHO05D004349 3.6e-07 60.8 114 38.6
CAN.G211.7 Capsicum annuum HOM05D004242 ORTHO05D004349 6.2e-07 60.1 105 40.0
Solyc08g067370.1 Solanum lycopersicum HOM05D004242 ORTHO05D004349 6.2e-07 60.1 108 40.7
Sopen08g021310 Solanum pennellii HOM05D004242 ORTHO05D004349 8.1e-07 59.7 108 40.7
PGR031G2923 Punica granatum HOM05D004242 ORTHO05D004349 1.1e-06 59.3 101 38.6
CiPaw.02G043200 Carya illinoinensis HOM05D004242 ORTHO05D004349 1.4e-06 58.9 150 28.0
FAN03G1939 Fragaria x ananassa HOM05D004242 ORTHO05D004349 1.4e-06 58.9 123 32.5
PGSC0003DMG400007374 Solanum tuberosum HOM05D004242 ORTHO05D004349 1.4e-06 58.9 105 40.0
ClCG05G000580 Citrullus lanatus HOM05D004242 ORTHO05D004349 1.8e-06 58.5 184 27.2
Gohir.A07G135500 Gossypium hirsutum HOM05D004242 ORTHO05D004349 1.8e-06 58.5 106 34.0
PSO761G0055 Papaver somniferum HOM05D004242 ORTHO05D004349 1.8e-06 58.5 121 35.5
RcHm_v2.0_Chr3g0484701 Rosa chinensis HOM05D004242 ORTHO05D004349 1.8e-06 58.5 118 34.7
TWI59G0661 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 1.8e-06 58.5 116 32.8
Sed0025990 Sechium edule HOM05D004242 ORTHO05D004349 2.4e-06 58.2 117 33.3
MSTRG.28279 Avicennia marina HOM05D004242 ORTHO05D004349 3.1e-06 57.8 108 37.0
Eucgr.D02643 Eucalyptus grandis HOM05D004242 ORTHO05D004349 3.1e-06 57.8 124 36.3
MELO3C022249.2 Cucumis melo HOM05D004242 ORTHO05D004349 4.0e-06 57.4 119 30.3
Lj3g0014324 Lotus japonicus HOM05D004242 ORTHO05D004349 4.0e-06 57.4 108 38.0
Potri.014G102466 Populus trichocarpa HOM05D004242 ORTHO05D004349 4.0e-06 57.4 115 35.7
TWI14G0118 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 4.0e-06 57.4 113 36.3
Medtr7g117980 Medicago truncatula HOM05D004242 ORTHO05D004349 5.3e-06 57.0 108 34.3
Sabra11G0134200 Salix brachista HOM05D005336 ORTHO05D006511 5.3e-06 57.0 131 30.5
CiPaw.02G043000 Carya illinoinensis HOM05D004242 ORTHO05D004349 6.9e-06 56.6 119 33.6
ATR0579G028 Amborella trichopoda HOM05D005336 ORTHO05D006511 9.0e-06 56.2 170 29.4
Ca_09531_v3 Cicer arietinum L. HOM05D004242 ORTHO05D004349 9.0e-06 56.2 107 34.6
Manes.01G267100 Manihot esculenta HOM05D004242 ORTHO05D004349 9.0e-06 56.2 119 31.9
Psat3g001320 Pisum sativum HOM05D004242 ORTHO05D004349 9.0e-06 56.2 103 35.0


User provided reference genes

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