Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049914.1 Olea europaea HOM05D000361 ORTHO05D004243 0.0e+00 1276.2 661 100.0
Oeu008471.2 Olea europaea HOM05D000361 ORTHO05D004243 5.0e-184 648.7 833 51.6
MSTRG.21685 Avicennia marina HOM05D000361 ORTHO05D004243 3.2e-183 646.0 832 50.0
Nitab4.5_0006144g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 9.0e-178 627.9 833 49.1
Sopen06g004290 Solanum pennellii HOM05D000361 ORTHO05D004243 9.0e-178 627.9 831 49.3
Cc01_g21390 Coffea canephora HOM05D000361 ORTHO05D004243 1.5e-177 627.1 828 48.6
Peaxi162Scf00691g00222 Petunia axillaris HOM05D000361 ORTHO05D004243 1.0e-176 624.4 801 48.9
Actinidia20995 Actinidia chinensis HOM05D000361 ORTHO05D004243 1.3e-176 624.0 825 48.8
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 2.5e-175 619.8 838 48.0
Solyc06g009650.3 Solanum lycopersicum HOM05D000361 ORTHO05D004243 2.5e-175 619.8 831 48.7
Nitab4.5_0000363g0270 Nicotiana tabacum HOM05D000361 ORTHO05D004243 1.6e-174 617.1 859 48.1
Actinidia25847 Actinidia chinensis HOM05D000361 ORTHO05D004243 3.6e-174 615.9 820 49.1
Dinv33114 Davidia involucrata HOM05D000361 ORTHO05D004243 1.4e-173 614.0 818 49.1
Migut.N00925 Erythranthe guttata HOM05D000361 ORTHO05D004243 1.4e-173 614.0 836 48.7
SGA_v2.0_scaffold36G14324 Striga asiatica HOM05D000361 ORTHO05D004243 1.4e-173 614.0 861 47.7
CAN.G1280.26 Capsicum annuum HOM05D000361 ORTHO05D004243 3.9e-173 612.5 838 48.1
Peaxi162Scf00058g02630 Petunia axillaris HOM05D000361 ORTHO05D004243 6.7e-173 611.7 854 47.3
Rhsim01G0290600 Rhododendron simsii HOM05D000361 ORTHO05D004243 2.5e-172 609.8 833 48.1
Thecc.01G313200 Theobroma cacao HOM05D000361 ORTHO05D004243 4.3e-172 609.0 828 47.5
Nitab4.5_0001301g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 6.3e-171 605.1 768 49.6
CSS0010179 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 3.4e-169 599.4 833 47.5
Sopen01g031260 Solanum pennellii HOM05D000361 ORTHO05D004243 7.7e-169 598.2 831 47.9
vmacro15111 Vaccinium macrocarpon HOM05D000361 ORTHO05D004243 1.0e-168 597.8 841 47.6
Eucgr.H00929 Eucalyptus grandis HOM05D000361 ORTHO05D004243 3.8e-168 595.9 832 46.8
GSVIVG01028119001 Vitis vinifera HOM05D000361 ORTHO05D004243 3.8e-168 595.9 828 46.7
Solyc01g079490.2 Solanum lycopersicum HOM05D000361 ORTHO05D004243 5.0e-168 595.5 831 47.8
COL.COLO4_23233 Corchorus olitorius HOM05D000361 ORTHO05D004243 7.2e-167 591.7 793 48.7
CiPaw.07G117400 Carya illinoinensis HOM05D000361 ORTHO05D004243 1.2e-166 590.9 831 46.2
MELO3C023707.2 Cucumis melo HOM05D000361 ORTHO05D004243 1.6e-166 590.5 826 45.5
MD03G1295300 Malus domestica HOM05D000361 ORTHO05D004243 1.0e-165 587.8 826 46.5
CSS0030911 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 1.4e-165 587.4 837 47.1
Prupe.5G007800 Prunus persica HOM05D000361 ORTHO05D004243 2.3e-165 586.6 826 46.9
Gohir.A12G125100 Gossypium hirsutum HOM05D000361 ORTHO05D004243 3.0e-165 586.3 830 46.4
Duzib138G1700 Durio zibethinus HOM05D000361 ORTHO05D004243 5.1e-165 585.5 828 46.6
QL12p019966 Quercus lobata HOM05D000361 ORTHO05D004243 5.1e-165 585.5 838 46.5
CsaV3_7G025080 Cucumis sativus L. HOM05D000361 ORTHO05D004243 2.6e-164 583.2 823 45.1
CANSAT25G2078 Cannabis sativa HOM05D000361 ORTHO05D004243 5.7e-164 582.0 814 47.1
Gohir.D12G128800 Gossypium hirsutum HOM05D000361 ORTHO05D004243 5.7e-164 582.0 830 45.9
Gorai.008G139800 Gossypium raimondii HOM05D000361 ORTHO05D004243 7.4e-164 581.6 830 45.8
Haze_05039 Corylus avellana HOM05D000361 ORTHO05D004243 2.2e-163 580.1 828 46.4
AUR62011807 Chenopodium quinoa HOM05D000361 ORTHO05D004243 2.8e-163 579.7 832 45.8
Sed0012026 Sechium edule HOM05D000361 ORTHO05D004243 1.1e-162 577.8 823 44.7
Manes.01G227700 Manihot esculenta HOM05D000361 ORTHO05D004243 1.4e-162 577.4 831 45.8
Ciclev10010795m.g Citrus clementina HOM05D000361 ORTHO05D004243 3.5e-161 572.8 833 45.6
CSS0012467 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 4.5e-161 572.4 835 47.1
AUR62024653 Chenopodium quinoa HOM05D000361 ORTHO05D004243 1.3e-160 570.9 832 45.6
PGR119G2139 Punica granatum HOM05D000361 ORTHO05D004243 8.5e-160 568.2 821 46.3
RcHm_v2.0_Chr7g0241471 Rosa chinensis HOM05D000361 ORTHO05D004243 5.5e-159 565.5 826 45.5
Nn4g25601 Nelumbo nucifera HOM05D000361 ORTHO05D004243 1.6e-158 563.9 825 45.5
FvH4_5g39210 Fragaria vesca HOM05D000361 ORTHO05D004243 8.0e-158 561.6 827 45.2
SalBow2G3626 Salvia bowleyana HOM05D000361 ORTHO05D004243 1.8e-157 560.5 846 45.5
Ciclev10018936m.g Citrus clementina HOM05D000361 ORTHO05D004243 4.0e-157 559.3 827 45.3
Potri.002G196300 Populus trichocarpa HOM05D000361 ORTHO05D004243 4.0e-157 559.3 829 45.0
Aqoxy3G02976 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 5.2e-157 558.9 836 45.0
EL10As5g23529 Beta vulgaris HOM05D000361 ORTHO05D004243 2.0e-156 557.0 823 46.1
FAN18G4464 Fragaria x ananassa HOM05D000361 ORTHO05D004243 5.7e-156 555.4 801 45.6
TWI36G0074 Tripterygium wilfordii HOM05D000361 ORTHO05D004243 4.8e-155 552.4 828 45.0
Duzib133G0716 Durio zibethinus HOM05D000361 ORTHO05D004243 1.4e-154 550.8 801 46.6
FAN08G2818 Fragaria x ananassa HOM05D000361 ORTHO05D004243 1.4e-154 550.8 799 45.7
ClCG07G000710 Citrullus lanatus HOM05D000361 ORTHO05D004243 4.1e-154 549.3 808 44.6
Glyma.10G013400 Glycine max HOM05D000361 ORTHO05D004243 1.3e-152 544.3 823 43.7
Ca_10285_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 1.7e-152 543.9 827 43.5
Gohir.A11G109900 Gossypium hirsutum HOM05D000361 ORTHO05D004243 5.0e-152 542.3 828 44.0
TPR.G19758 Trifolium pratense HOM05D000361 ORTHO05D004243 1.9e-151 540.4 827 44.3
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea HOM05D000361 ORTHO05D004243 2.5e-151 540.0 856 42.9
Lj5g0013347 Lotus japonicus HOM05D000361 ORTHO05D004243 3.2e-151 539.7 827 44.0
Gorai.007G122900 Gossypium raimondii HOM05D000361 ORTHO05D004243 5.5e-151 538.9 828 44.1
Phvul.007G214400 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 7.2e-151 538.5 826 43.9
Glyma.02G012800 Glycine max HOM05D000361 ORTHO05D004243 2.1e-150 537.0 823 44.0
Hund09630 Selenicereus undatus HOM05D000361 ORTHO05D004243 2.1e-150 537.0 817 44.7
DCAR_012354 Daucus carota HOM05D000361 ORTHO05D004243 4.7e-150 535.8 816 44.4
Aqoxy3G01218 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 8.0e-150 535.0 833 44.2
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 1.0e-149 534.6 794 45.6
Potri.014G120900 Populus trichocarpa HOM05D000361 ORTHO05D004243 2.3e-149 533.5 829 44.1
THA.LOC104801306 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 2.3e-149 533.5 832 43.1
VMungo0720G0598 Vigna mungo HOM05D000361 ORTHO05D004243 3.0e-149 533.1 824 44.3
Lalb_Chr06g0166851 Lupinus albus HOM05D000361 ORTHO05D004243 5.2e-149 532.3 821 44.1
AL6G51220 Arabidopsis lyrata HOM05D000361 ORTHO05D004243 2.6e-148 530.0 828 42.1
Medtr1g087100 Medicago truncatula HOM05D000361 ORTHO05D004243 2.6e-148 530.0 831 43.3
PSO017G2448 Papaver somniferum HOM05D000361 ORTHO05D004243 5.7e-148 528.9 836 43.1
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.3e-147 527.7 869 42.1
Sp6g01910 Schrenkiella parvula HOM05D000361 ORTHO05D004243 3.7e-147 526.2 838 42.1
AT4G02030 Arabidopsis thaliana HOM05D000361 ORTHO05D004243 4.8e-147 525.8 827 41.8
THA.LOC104799236 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 6.3e-147 525.4 829 42.6
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 4.1e-146 522.7 817 43.7
Carub.0006s3520 Capsella rubella HOM05D000361 ORTHO05D004243 7.0e-146 521.9 832 41.7
PSO063G6259 Papaver somniferum HOM05D000361 ORTHO05D004243 7.0e-146 521.9 835 42.6
HanXRQChr15g0464131 Helianthus annuus HOM05D000361 ORTHO05D004243 1.7e-144 517.3 814 44.2
CARHR249640 Cardamine hirsuta HOM05D000361 ORTHO05D004243 2.9e-144 516.5 830 41.2
CDE11G0331 Ceratophyllum demersum HOM05D000361 ORTHO05D004243 1.1e-143 514.6 826 42.5
Thhalv10028443m.g Eutrema salsugineum HOM05D000361 ORTHO05D004243 1.5e-143 514.2 831 41.3
Psat6g161800 Pisum sativum HOM05D000361 ORTHO05D004243 1.5e-143 514.2 823 42.4
BcaC04g24028 Brassica carinata HOM05D000361 ORTHO05D004243 2.6e-140 503.4 807 42.5
C09p01600 Brassica napus HOM05D000361 ORTHO05D004243 5.7e-140 502.3 808 42.5
A09p01480 Brassica napus HOM05D000361 ORTHO05D004243 9.8e-140 501.5 808 42.7
BcaB01g02087 Brassica carinata HOM05D000361 ORTHO05D004243 2.4e-138 496.9 807 42.5
Aa31LG5G1680 Aethionema arabicum HOM05D000361 ORTHO05D004243 9.2e-138 495.0 852 40.0
Sc05g0000420 Simmondsia chinensis HOM05D000361 ORTHO05D004243 1.2e-137 494.6 659 49.0
ATR0796G177 Amborella trichopoda HOM05D000361 ORTHO05D004243 2.0e-137 493.8 826 40.8
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 1.5e-135 487.6 932 39.5
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea HOM05D000361 ORTHO05D004243 4.3e-135 486.1 792 42.0
BolC9t53093H Brassica oleracea HOM05D000361 ORTHO05D004243 2.8e-134 483.4 814 41.6
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea HOM05D000361 ORTHO05D004243 8.0e-134 481.9 800 41.8
BraA09t35809Z Brassica rapa HOM05D000361 ORTHO05D004243 5.7e-132 475.7 827 40.9
Lj1g0012423 Lotus japonicus HOM05D000361 ORTHO05D004243 6.4e-131 472.2 756 42.7
VMungo1383G3239 Vigna mungo HOM05D000361 ORTHO05D004243 2.4e-130 470.3 797 42.3
Ah.10g031040 Amaranthus hybridus HOM05D000361 ORTHO05D004243 1.0e-128 464.9 678 45.6
FAN04G1824 Fragaria x ananassa HOM05D000361 ORTHO05D004243 2.3e-128 463.8 816 40.6
Sabra02G0160700 Salix brachista HOM05D000361 ORTHO05D004243 7.3e-127 458.8 1027 36.2
Lsat_1_v5_gn_1_35460 Lactuca sativa HOM05D000361 ORTHO05D004243 1.8e-125 454.1 963 37.8
Psat3g020160 Pisum sativum HOM05D000361 ORTHO05D004243 2.3e-125 453.8 803 39.7
Os03g0737800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D004243 3.7e-123 446.4 762 40.4
Manes.05G003200 Manihot esculenta HOM05D000361 ORTHO05D004243 4.1e-122 443.0 696 42.7
TPR.G4118 Trifolium pratense HOM05D000361 ORTHO05D004243 8.9e-117 425.2 808 38.4
Aqoxy328s001 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 1.2e-113 414.8 737 40.7
TAR633G1939 Trochodendron aralioides HOM05D000361 ORTHO05D004243 6.0e-113 412.5 532 50.4
Dinv10097 Davidia involucrata HOM05D000361 ORTHO05D004243 7.3e-111 405.6 531 51.0
HPP92_004593 Vanilla planifolia HOM05D000361 ORTHO05D004243 7.3e-111 405.6 676 41.4
Lj2A1205T44 Lonicera japonica HOM05D000361 ORTHO05D004243 2.9e-99 367.1 796 37.1
Nitab4.5_0011075g0020 Nicotiana tabacum HOM05D000361 ORTHO05D004243 1.4e-98 364.8 607 40.4
ClCG10G006350 Citrullus lanatus HOM05D000361 ORTHO05D004243 6.2e-94 349.4 596 39.1
Cpa.g.sc18.42 Carica papaya HOM05D000361 ORTHO05D004243 2.4e-90 337.4 576 40.6
Phvul.001G212700 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 9.0e-85 318.9 592 40.0
Oeu041216.1 Olea europaea HOM05D000361 ORTHO05D004243 2.0e-84 317.8 390 52.6
CAN.G777.12 Capsicum annuum HOM05D000361 ORTHO05D004243 4.2e-82 310.1 405 51.4
Mapoly0167s0022 Marchantia polymorpha HOM05D000361 ORTHO05D004243 2.1e-81 307.8 855 29.6
SMO116G0335 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 4.6e-81 306.6 818 30.6
Atru.chr5.1003 Acer truncatum HOM05D000361 ORTHO05D004243 1.0e-80 305.4 430 44.9
SMO195G0031 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 3.0e-80 303.9 821 30.6
Pp3c12_23510 Physcomitrium patens HOM05D000361 ORTHO05D004243 1.9e-79 301.2 825 29.8
Lalb_Chr15g0078161 Lupinus albus HOM05D000361 ORTHO05D004243 2.7e-65 254.2 465 38.5
Pp3c3_36800 Physcomitrium patens HOM05D000361 ORTHO05D004243 4.6e-65 253.4 806 27.5
Gohir.D11G114600 Gossypium hirsutum HOM05D000361 ORTHO05D004243 9.7e-63 245.7 395 41.3
Zm00001eb215280 Zea mays HOM05D000361 ORTHO05D004243 1.6e-62 245.0 451 41.2
unitig_736.g22937 Utricularia gibba HOM05D000361 ORTHO05D004243 1.8e-61 241.5 404 45.0
DCAR_005759 Daucus carota HOM05D000361 ORTHO05D004243 9.1e-61 239.2 481 39.3
unitig_736.g22938 Utricularia gibba HOM05D000361 ORTHO05D004243 4.2e-58 230.3 332 43.7
Atru.chr5.1002 Acer truncatum HOM05D000361 ORTHO05D004243 7.9e-57 226.1 222 61.3
arahy.Tifrunner.gnm1.ann1.Z1FAFN Arachis hypogaea HOM05D000361 ORTHO05D004243 3.1e-53 214.2 237 55.3
SEGI_20894 Sequoiadendron giganteum HOM05D000361 ORTHO05D004243 2.6e-52 211.1 347 42.7
AagrBONN_evm.TU.Sc2ySwM_228.3730 Anthoceros agrestis HOM05D000361 ORTHO05D004243 3.6e-49 200.7 639 27.4
arahy.Tifrunner.gnm1.ann1.99VT9P Arachis hypogaea HOM05D000361 ORTHO05D004243 5.7e-47 193.4 232 50.9
Ca_09209_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 2.8e-46 191.0 535 31.6
arahy.Tifrunner.gnm1.ann1.3FW809 Arachis hypogaea HOM05D000361 ORTHO05D004243 5.3e-45 186.8 237 49.8
arahy.Tifrunner.gnm1.ann1.1JN5P4 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.0e-43 182.6 164 63.4
DCAR_005760 Daucus carota HOM05D000361 ORTHO05D004243 7.5e-39 166.4 205 47.3
CBR_g48220 Chara braunii HOM05D000361 ORTHO05D004243 9.7e-39 166.0 1075 22.4
BcaC04g24029 Brassica carinata HOM05D000361 ORTHO05D004243 3.7e-38 164.1 195 50.3
COL.COLO4_26725 Corchorus olitorius HOM05D000361 ORTHO05D004243 2.1e-33 148.3 202 45.0
Oeu049910.1 Olea europaea HOM05D000361 ORTHO05D004243 4.1e-29 134.0 97 73.2
Lalb_Chr15g0078151 Lupinus albus HOM05D000361 ORTHO05D004243 2.0e-28 131.7 158 52.5
Cc05_g04720 Coffea canephora HOM05D000361 ORTHO05D004243 6.5e-27 126.7 117 55.6
Zm00001eb056500 Zea mays HOM05D000361 ORTHO05D004243 3.2e-26 124.4 267 33.7
CAN.G777.11 Capsicum annuum HOM05D000361 ORTHO05D004243 9.5e-26 122.9 140 47.1
Cc02_g33820 Coffea canephora HOM05D000361 ORTHO05D004243 2.1e-25 121.7 116 53.4
Lalb_Chr15g0078171 Lupinus albus HOM05D000361 ORTHO05D004243 2.8e-25 121.3 88 69.3
Cc11_g04100 Coffea canephora HOM05D000361 ORTHO05D004243 4.4e-23 114.0 117 53.0
Cc02_g26000 Coffea canephora HOM05D000361 ORTHO05D004243 6.3e-22 110.2 117 51.3
Cc04_g08620 Coffea canephora HOM05D000361 ORTHO05D004243 6.3e-22 110.2 117 51.3
Cc03_g12210 Coffea canephora HOM05D000361 ORTHO05D004243 8.3e-22 109.8 104 53.8
SEGI_09541 Sequoiadendron giganteum HOM05D000361 ORTHO05D004243 1.8e-21 108.6 89 61.8
PRCOL_00004542 Prasinoderma coloniale HOM05D000361 ORTHO05D004243 5.4e-21 107.1 830 21.2
MCO10G287 Micromonas commoda HOM05D000361 ORTHO05D004243 7.8e-20 103.2 244 30.3
Dinv10095 Davidia involucrata HOM05D000361 ORTHO05D004243 5.0e-19 100.5 103 57.3
Actinidia04728 Actinidia chinensis HOM05D000361 ORTHO05D004243 7.3e-18 96.7 158 39.2
arahy.Tifrunner.gnm1.ann1.3YE891 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.6e-17 95.5 70 68.6
Cre09.g404650 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D004243 2.1e-17 95.1 239 31.0
Migut.H00631 Erythranthe guttata HOM05D000361 ORTHO05D004243 2.1e-17 95.1 106 59.4
Gorai.008G140000 Gossypium raimondii HOM05D000361 ORTHO05D004243 6.1e-17 93.6 124 49.2
Actinidia04687 Actinidia chinensis HOM05D000361 ORTHO05D004243 1.8e-16 92.0 158 39.9
Actinidia27762 Actinidia chinensis HOM05D000361 ORTHO05D004243 1.8e-16 92.0 158 39.9
MD11G1314200 Malus domestica HOM05D000361 ORTHO05D004243 6.8e-16 90.1 148 43.9
Dinv10096 Davidia involucrata HOM05D000361 ORTHO05D004243 1.7e-14 85.5 51 70.6
Cc00_g34370 Coffea canephora HOM05D000361 ORTHO05D004243 3.5e-12 77.8 88 44.3
arahy.Tifrunner.gnm1.ann1.F7DSY0 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.5e-10 72.4 91 49.5
Glyma.14G155300 Glycine max HOM05D000361 ORTHO05D004243 3.3e-10 71.2 50 60.0
Lj2A1205T45 Lonicera japonica HOM05D000361 ORTHO05D004243 9.5e-10 69.7 62 64.5
CAN.G1393.2 Capsicum annuum HOM05D005033 ORTHO05D005387 2.1e-09 68.6 71 56.3
SHI15042 Sapria himalayana HOM05D000361 ORTHO05D004243 1.1e-08 66.2 70 52.9
arahy.Tifrunner.gnm1.ann1.WB4NLC Arachis hypogaea HOM05D001795 ORTHO05D001741 3.1e-08 64.7 43 76.7
arahy.Tifrunner.gnm1.ann1.DXQ6L2 Arachis hypogaea HOM05D001795 ORTHO05D001741 6.8e-08 63.5 43 74.4
CDE05G1119 Ceratophyllum demersum HOM05D001444 ORTHO05D003766 5.8e-07 60.5 121 34.7
ClCG10G006380 Citrullus lanatus HOM05D000361 ORTHO05D004243 7.5e-07 60.1 59 57.6
DCAR_010084 Daucus carota HOM05D000361 ORTHO05D015272 2.9e-06 58.2 51 54.9


User provided reference genes

Program Settings