Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 3.0e-117 425.2 225 100.0
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 5.6e-87 324.7 219 80.8
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 6.2e-86 321.2 217 80.6
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 8.1e-86 320.9 219 78.5
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 1.8e-85 319.7 217 71.9
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 9.8e-84 313.9 219 76.7
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 2.4e-82 309.3 213 79.8
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 3.5e-81 305.4 215 77.7
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 2.3e-80 302.8 219 72.6
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 3.9e-80 302.0 216 78.2
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.9e-80 302.0 215 76.7
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 3.9e-80 302.0 216 76.9
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 8.6e-80 300.8 214 77.6
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 4.3e-79 298.5 215 71.6
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 4.3e-79 298.5 215 75.8
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 4.3e-79 298.5 215 71.6
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 4.3e-79 298.5 209 78.0
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 7.3e-79 297.7 215 75.8
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 7.3e-79 297.7 209 77.5
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 7.3e-79 297.7 209 77.5
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 9.5e-79 297.4 209 78.5
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 1.2e-78 297.0 210 77.6
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.6e-78 296.6 216 74.1
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 2.1e-78 296.2 216 75.5
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 2.1e-78 296.2 213 76.5
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 2.8e-78 295.8 216 75.5
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 2.8e-78 295.8 217 73.7
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 2.8e-78 295.8 217 73.7
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.6e-78 295.4 215 75.3
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 4.7e-78 295.0 213 76.5
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 4.7e-78 295.0 224 63.8
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 6.2e-78 294.7 215 75.3
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 8.1e-78 294.3 215 75.3
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 1.1e-77 293.9 206 68.4
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 1.1e-77 293.9 215 75.3
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 1.1e-77 293.9 213 65.7
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 4.0e-77 292.0 213 75.1
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 5.2e-77 291.6 212 74.1
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 5.2e-77 291.6 174 79.3
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 6.8e-77 291.2 216 72.7
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 6.8e-77 291.2 218 73.4
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 1.5e-76 290.0 215 74.0
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 2.6e-76 289.3 215 64.7
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 3.4e-76 288.9 217 64.5
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 3.4e-76 288.9 209 76.1
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 4.4e-76 288.5 211 74.4
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 1.3e-75 287.0 213 75.6
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 1.3e-75 287.0 215 66.5
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 2.9e-75 285.8 221 71.5
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 3.7e-75 285.4 208 76.4
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 4.9e-75 285.0 215 66.0
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 4.9e-75 285.0 212 72.6
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 4.9e-75 285.0 219 72.6
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 8.4e-75 284.3 216 72.2
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 8.4e-75 284.3 216 72.2
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.1e-74 283.9 208 73.6
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 1.1e-74 283.9 215 65.6
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 2.4e-74 282.7 211 73.5
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 2.4e-74 282.7 209 74.2
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 3.2e-74 282.3 216 63.9
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 5.4e-74 281.6 212 70.8
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 7.1e-74 281.2 208 63.9
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 1.2e-73 280.4 217 63.6
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 3.5e-73 278.9 216 69.4
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 3.5e-73 278.9 216 69.4
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 3.5e-73 278.9 217 71.9
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 3.5e-73 278.9 206 68.9
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 6.0e-73 278.1 206 74.8
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 1.0e-72 277.3 217 70.0
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 1.0e-72 277.3 217 62.7
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.0e-72 277.3 211 72.5
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 1.7e-72 276.6 215 71.6
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 3.9e-72 275.4 217 68.7
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 3.9e-72 275.4 217 68.7
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 3.9e-72 275.4 217 68.7
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 5.1e-72 275.0 217 69.1
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 5.1e-72 275.0 216 69.0
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 6.6e-72 274.6 217 69.1
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 1.5e-71 273.5 217 68.2
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 1.9e-71 273.1 206 67.0
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 3.3e-71 272.3 217 69.6
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 4.3e-71 271.9 215 60.9
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 5.6e-71 271.6 206 72.3
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 7.3e-71 271.2 217 68.7
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 9.6e-71 270.8 212 69.3
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 1.6e-70 270.0 216 67.6
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 4.7e-70 268.5 170 74.1
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 6.2e-70 268.1 214 70.1
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 8.1e-70 267.7 204 73.0
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 8.1e-70 267.7 206 71.4
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 2.4e-69 266.2 198 75.8
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 2.4e-69 266.2 206 71.8
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 3.1e-69 265.8 210 69.0
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 4.0e-69 265.4 196 75.0
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.5e-68 263.5 210 67.6
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 1.3e-67 260.4 208 61.1
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 1.7e-67 260.0 208 58.2
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 1.7e-67 260.0 269 50.6
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 1.7e-67 260.0 214 57.9
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 2.9e-67 259.2 218 64.2
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 3.8e-67 258.8 206 71.8
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 8.4e-67 257.7 210 69.5
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 7.1e-66 254.6 210 69.0
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 6.6e-64 248.1 190 72.6
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 6.9e-61 238.0 213 61.0
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 9.0e-61 237.7 208 62.0
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 5.8e-60 235.0 215 53.5
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 5.8e-60 235.0 209 55.5
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 4.9e-59 231.9 220 66.4
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 4.3e-55 218.8 213 54.5
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 7.1e-50 201.4 172 59.3
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 3.7e-46 189.1 204 55.4
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 2.6e-44 183.0 215 43.3
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 3.8e-43 179.1 215 54.0
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 2.5e-42 176.4 206 50.5
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 1.8e-37 160.2 129 57.4
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 1.6e-33 147.1 164 43.9
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 5.1e-32 142.1 98 70.4
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 4.1e-21 105.9 91 76.9
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 3.0e-16 89.7 80 53.8
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 1.1e-10 71.2 49 65.3
Carub.0006s3338 Capsella rubella HOM05D000710 ORTHO05D000336 2.7e-09 66.6 169 33.7
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 4.7e-09 65.9 94 40.4
AL6G49060 Arabidopsis lyrata HOM05D000710 ORTHO05D000336 3.3e-07 59.7 159 31.4
FAN23G0561 Fragaria x ananassa HOM05D000710 ORTHO05D000336 5.7e-07 58.9 160 28.8
FvH4_1g14800 Fragaria vesca HOM05D000710 ORTHO05D000336 1.7e-06 57.4 160 28.8
RcHm_v2.0_Chr3g0487451 Rosa chinensis HOM05D032618 ORTHO05D007999 2.2e-06 57.0 52 48.1
FAN19G1902 Fragaria x ananassa HOM05D000710 ORTHO05D000336 3.7e-06 56.2 160 28.1


User provided reference genes

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