Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 7.0e-192 673.7 323 100.0
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 4.5e-114 415.2 272 70.2
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 2.5e-112 409.5 284 67.6
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 7.9e-111 404.4 264 71.6
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 1.4e-110 403.7 254 72.4
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 2.6e-109 399.4 256 73.8
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 2.8e-108 396.0 253 71.1
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 4.8e-108 395.2 275 66.9
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 4.8e-108 395.2 275 66.9
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 8.2e-108 394.4 275 66.9
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 1.4e-107 393.7 312 62.2
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 5.3e-107 391.7 285 64.6
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 5.3e-107 391.7 249 70.7
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.2e-106 390.6 247 71.7
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 2.0e-106 389.8 281 64.4
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 2.0e-106 389.8 302 61.3
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 3.5e-106 389.0 247 71.3
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 5.9e-106 388.3 285 63.5
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 7.7e-106 387.9 247 70.4
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 7.7e-106 387.9 247 71.7
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 1.7e-105 386.7 319 59.2
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 1.7e-105 386.7 312 62.2
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 5.0e-105 385.2 328 58.8
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 1.1e-104 384.0 256 69.5
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 1.5e-104 383.6 247 72.9
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 1.9e-104 383.3 319 58.3
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 4.2e-104 382.1 280 61.8
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.6e-103 380.2 256 68.8
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 1.6e-103 380.2 254 68.5
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 2.1e-103 379.8 248 69.8
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 3.6e-103 379.0 322 58.4
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 3.6e-103 379.0 256 69.1
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 6.1e-103 378.3 247 70.4
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.0e-102 377.5 320 58.4
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 1.0e-102 377.5 260 66.5
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-102 377.1 270 65.2
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 2.3e-102 376.3 301 58.5
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 3.0e-102 375.9 257 67.3
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 6.7e-102 374.8 297 60.6
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 2.6e-101 372.9 270 64.8
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 2.6e-101 372.9 274 63.5
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 3.3e-101 372.5 254 68.1
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 1.3e-100 370.5 288 60.8
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 1.1e-99 367.5 252 67.5
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 1.4e-99 367.1 338 57.1
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 3.1e-99 365.9 285 61.4
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 7.0e-99 364.8 250 66.0
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 1.7e-97 360.1 247 66.0
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 8.5e-97 357.8 260 63.1
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 8.5e-97 357.8 247 66.0
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 1.5e-96 357.1 345 54.8
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 2.5e-96 356.3 247 65.2
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 4.2e-96 355.5 247 63.6
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 5.5e-96 355.1 285 61.1
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 7.2e-96 354.8 253 64.8
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 1.0e-94 350.9 247 65.2
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 2.3e-94 349.7 247 64.0
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 4.0e-94 349.0 249 65.5
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 6.8e-94 348.2 288 58.0
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 6.8e-94 348.2 288 58.0
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 3.4e-93 345.9 248 63.7
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 4.4e-93 345.5 253 64.4
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 7.5e-93 344.7 249 64.3
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 6.3e-92 341.7 293 58.0
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 1.4e-91 340.5 249 63.9
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 7.0e-91 338.2 230 67.8
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 1.2e-90 337.4 236 65.3
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 2.0e-90 336.7 307 57.0
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 2.7e-90 336.3 260 63.1
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.7e-89 333.6 312 54.5
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 1.7e-89 333.6 312 54.5
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.5e-88 330.5 230 65.2
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 1.9e-88 330.1 252 61.9
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 4.0e-86 322.4 241 60.2
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 2.8e-84 316.2 260 57.7
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 3.7e-84 315.8 250 60.8
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 1.4e-83 313.9 262 58.8
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 2.0e-82 310.1 329 50.5
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 5.9e-82 308.5 271 56.1
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 6.8e-78 295.0 319 50.5
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 6.4e-76 288.5 201 65.2
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 2.0e-69 266.9 282 49.3
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 9.8e-69 264.6 253 53.8
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 8.3e-60 235.0 179 59.8
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 6.0e-58 228.8 248 47.6
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 1.6e-55 220.7 245 44.5
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 1.4e-54 217.6 204 57.4
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 1.6e-50 204.1 129 67.4
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 1.2e-47 194.5 260 40.4
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 4.0e-46 189.5 249 40.2
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 2.9e-44 183.3 116 75.0
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 4.8e-39 166.0 104 68.3
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 1.1e-35 154.8 101 62.4
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 1.9e-32 144.1 79 74.7
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 2.8e-31 140.2 300 31.3
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 2.6e-29 133.7 117 60.7
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 7.6e-29 132.1 79 69.6
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 2.5e-24 117.1 67 70.1
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 4.3e-24 116.3 84 56.0
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 2.5e-16 90.5 47 76.6
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 2.5e-16 90.5 47 76.6
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 2.5e-16 90.5 67 67.2
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 2.5e-16 90.5 67 67.2
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 2.5e-16 90.5 68 66.2
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 1.3e-12 78.2 58 60.3
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 1.3e-12 78.2 58 60.3
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 2.9e-12 77.0 60 50.0
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 7.9e-10 68.9 41 68.3
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-09 68.2 42 64.3
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 1.5e-08 64.7 32 78.1
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 5.7e-08 62.8 61 47.5
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 2.8e-07 60.5 113 36.3
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 8.2e-07 58.9 46 54.3
Hund18614 Selenicereus undatus HOM05D007092 ORTHO05D008947 9.1e-06 55.5 52 55.8


User provided reference genes

Program Settings