Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 5.9e-298 1026.9 582 100.0
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 5.3e-190 668.3 592 67.9
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 1.1e-182 644.0 589 67.9
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 6.7e-177 624.8 604 62.7
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 1.2e-170 604.0 570 63.2
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 2.7e-170 602.8 586 64.0
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 2.7e-165 586.3 583 63.6
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 1.0e-161 574.3 586 62.5
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 2.8e-159 566.2 616 58.6
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.4e-158 563.9 603 61.7
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 1.7e-156 557.0 618 58.7
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 5.0e-156 555.4 574 59.8
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 1.9e-155 553.5 599 58.1
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 5.6e-155 552.0 612 59.6
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 9.5e-155 551.2 571 63.9
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 1.2e-154 550.8 602 59.0
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 1.0e-153 547.7 597 60.6
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 1.0e-153 547.7 612 58.8
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 1.2e-152 544.3 598 60.5
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 2.6e-152 543.1 579 57.7
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 4.4e-152 542.3 578 59.2
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 3.7e-151 539.3 603 56.9
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 8.6e-148 528.1 603 57.5
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 1.1e-147 527.7 604 55.0
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 1.2e-146 524.2 592 56.6
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 6.2e-146 521.9 607 55.8
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 2.0e-144 516.9 576 58.7
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 2.0e-144 516.9 590 53.6
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 2.6e-144 516.5 550 61.3
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 1.3e-143 514.2 580 59.0
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 8.3e-143 511.5 665 50.7
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 1.9e-142 510.4 437 71.4
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 5.4e-142 508.8 599 57.9
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 9.2e-142 508.1 600 56.3
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 1.2e-141 507.7 580 59.3
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 7.8e-141 505.0 606 54.6
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 1.3e-140 504.2 565 59.5
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 1.7e-140 503.8 605 56.0
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 3.0e-140 503.1 559 59.4
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 3.9e-140 502.7 593 58.0
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 5.0e-140 502.3 565 59.3
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 5.0e-140 502.3 597 58.5
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 6.6e-140 501.9 535 61.3
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 2.1e-138 496.9 564 59.4
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 4.7e-138 495.7 526 59.9
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 3.1e-137 493.0 605 57.0
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 3.4e-136 489.6 605 53.7
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 8.3e-135 485.0 580 54.8
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 9.2e-134 481.5 572 52.4
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 3.5e-133 479.6 601 54.9
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 6.0e-133 478.8 590 57.5
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 6.0e-133 478.8 579 57.5
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 6.0e-133 478.8 589 53.8
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 7.8e-133 478.4 390 69.7
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 1.0e-132 478.0 569 57.1
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 2.3e-132 476.9 569 58.3
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 3.9e-132 476.1 559 52.6
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 5.1e-132 475.7 611 50.7
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 5.6e-131 472.2 597 55.6
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 7.3e-131 471.9 570 56.1
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 1.2e-130 471.1 604 52.5
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 2.8e-130 469.9 579 56.5
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 1.1e-129 468.0 586 53.4
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 1.3e-127 461.1 567 52.0
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 1.7e-127 460.7 590 50.2
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 1.1e-126 458.0 563 52.4
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 1.4e-126 457.6 529 53.7
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 4.1e-126 456.1 584 52.2
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 7.8e-125 451.8 570 53.9
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 1.7e-124 450.7 304 78.6
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 5.1e-124 449.1 522 56.3
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 2.5e-123 446.8 596 55.4
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 2.1e-122 443.7 519 58.6
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 4.7e-122 442.6 645 52.6
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 8.1e-122 441.8 545 54.9
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 9.0e-121 438.3 562 51.4
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 1.7e-119 434.1 581 53.7
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 6.4e-119 432.2 544 54.6
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 1.6e-117 427.6 636 52.7
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 4.6e-117 426.0 441 62.8
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 3.9e-116 422.9 322 72.0
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 3.3e-115 419.9 595 52.3
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 3.3e-115 419.9 619 52.2
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 1.3e-114 417.9 538 55.0
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 3.6e-114 416.4 500 56.2
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 1.7e-111 407.5 569 50.3
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 1.6e-109 401.0 569 47.3
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 1.5e-107 394.4 454 60.1
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 5.3e-105 386.0 579 49.4
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 1.2e-104 384.8 516 49.0
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 3.2e-102 376.7 563 49.6
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 9.3e-102 375.2 563 50.6
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 2.1e-101 374.0 570 50.9
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 2.7e-101 373.6 563 49.4
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 2.7e-101 373.6 563 49.4
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 5.1e-100 369.4 574 50.2
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 2.1e-98 364.0 593 48.7
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 1.0e-95 355.1 558 49.3
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 2.7e-93 347.1 577 48.9
Ca_04816_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 6.0e-93 345.9 574 49.5
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 5.1e-92 342.8 463 52.9
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 1.7e-87 327.8 218 80.7
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 6.9e-81 305.8 260 65.8
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 7.9e-77 292.4 209 72.7
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 2.8e-74 283.9 224 68.8
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 4.1e-73 280.0 527 47.4
Dinv37782 Davidia involucrata HOM05D004479 ORTHO05D005597 9.1e-73 278.9 386 53.1
BcaC06g31203 Brassica carinata HOM05D004479 ORTHO05D005597 2.1e-61 241.1 237 54.0
BraA06t27217Z Brassica rapa HOM05D004479 ORTHO05D005597 2.1e-61 241.1 235 55.3
BolC7t43874H Brassica oleracea HOM05D004479 ORTHO05D005597 3.3e-59 233.8 234 55.6
BcaC06g34021 Brassica carinata HOM05D004479 ORTHO05D005597 2.8e-58 230.7 237 54.0
Pp3c18_4030 Physcomitrium patens HOM05D004479 ORTHO05D005597 3.7e-58 230.3 334 45.2
Oeu062492.1 Olea europaea HOM05D004479 ORTHO05D005597 5.3e-57 226.5 239 54.8
A06p43310 Brassica napus HOM05D004479 ORTHO05D005597 5.0e-55 219.9 266 48.1
Mapoly0029s0023 Marchantia polymorpha HOM05D004479 ORTHO05D005597 4.0e-52 210.3 318 42.8
Psat1g118080 Pisum sativum HOM05D004479 ORTHO05D005597 2.0e-51 208.0 178 65.2
C07p33640 Brassica napus HOM05D004479 ORTHO05D005597 3.4e-43 180.6 234 49.1
SMO114G0145 Selaginella moellendorffii HOM05D004479 ORTHO05D005597 3.5e-40 170.6 222 44.1
AagrBONN_evm.TU.Sc2ySwM_117.1357 Anthoceros agrestis HOM05D004479 ORTHO05D005597 1.6e-37 161.8 269 39.8
CBR_g41305 Chara braunii HOM05D004479 ORTHO05D005597 2.1e-37 161.4 205 44.9
AagrBONN_evm.TU.Sc2ySwM_117.2251 Anthoceros agrestis HOM05D004479 ORTHO05D005597 2.8e-37 161.0 330 36.1
CARHR145470 Cardamine hirsuta HOM05D004479 ORTHO05D005597 1.7e-31 141.7 105 70.5
Psat0s1762g0040 Pisum sativum HOM05D004479 ORTHO05D005597 4.3e-30 137.1 194 46.4
SEGI_11469 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 9.5e-30 136.0 149 51.7
Aqoxy377s002 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 1.2e-24 119.0 220 43.6
Actinidia21652 Actinidia chinensis HOM05D004479 ORTHO05D005597 1.5e-22 112.1 66 78.8
QL03p033126 Quercus lobata HOM05D004479 ORTHO05D005597 2.8e-21 107.8 69 81.2
CiPaw.01G090700 Carya illinoinensis HOM05D004479 ORTHO05D005597 4.7e-21 107.1 232 42.2
COL.COLO4_31578 Corchorus olitorius HOM05D001810 ORTHO05D005662 6.2e-21 106.7 200 42.5
QL05p046913 Quercus lobata HOM05D004479 ORTHO05D005597 3.4e-19 100.9 123 56.1
SEGI_18721 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 1.1e-17 95.9 91 57.1
DCAR_030620 Daucus carota HOM05D004479 ORTHO05D005597 1.4e-17 95.5 84 65.5
SHI24407 Sapria himalayana HOM05D004479 ORTHO05D005597 1.6e-16 92.0 188 42.0
SHI42840 Sapria himalayana HOM05D004479 ORTHO05D005597 3.9e-15 87.4 133 42.9
Cpa.g.sc155.18 Carica papaya HOM05D004479 ORTHO05D005597 5.6e-14 83.6 89 59.6
SHI42601 Sapria himalayana HOM05D004479 ORTHO05D005597 2.8e-13 81.3 152 37.5
Nitab4.5_0005739g0060 Nicotiana tabacum HOM05D004479 ORTHO05D029161 2.6e-11 74.7 104 47.1
Psat3g175600 Pisum sativum HOM05D004479 ORTHO05D005597 1.7e-10 72.0 49 79.6
SHI42976 Sapria himalayana HOM05D004479 ORTHO05D005597 3.8e-10 70.9 115 40.9
COL.COLO4_18371 Corchorus olitorius HOM05D004479 ORTHO05D005597 4.9e-10 70.5 69 52.2
SHI31116 Sapria himalayana HOM05D004479 ORTHO05D005597 6.4e-10 70.1 48 72.9
Haze_16261 Corylus avellana HOM05D004479 ORTHO05D029161 1.1e-09 69.3 68 67.6
Peaxi162Scf00038g02640 Petunia axillaris HOM05D004479 ORTHO05D029161 3.2e-09 67.8 42 78.6
Hma1.2p1_0370F.1_g138010 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 2.7e-08 64.7 76 55.3
Psat0s1227g0080 Pisum sativum HOM05D000020 ORTHO05D015801 6.0e-08 63.5 173 35.8
Haze_18674 Corylus avellana HOM05D004479 ORTHO05D005597 1.0e-07 62.8 40 72.5
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 1.3e-07 62.4 39 71.8
C09p24010 Brassica napus HOM05D002960 ORTHO05D042139 1.3e-07 62.4 39 71.8
BolC9t55321H Brassica oleracea HOM05D002960 ORTHO05D042139 1.3e-07 62.4 39 71.8
SHI34972 Sapria himalayana HOM05D004479 ORTHO05D005597 1.3e-07 62.4 116 38.8
SHI49595 Sapria himalayana HOM05D004479 ORTHO05D005597 1.7e-07 62.0 113 38.9
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 2.3e-07 61.6 86 51.2
QL08p038027 Quercus lobata HOM05D004479 ORTHO05D337893 2.3e-07 61.6 201 32.8
SHI31115 Sapria himalayana HOM05D004479 ORTHO05D005597 3.9e-07 60.8 44 61.4
SHI50578 Sapria himalayana HOM05D004479 ORTHO05D005597 8.7e-07 59.7 250 30.0
Cpa.g.sc1515.1 Carica papaya HOM05D004479 ORTHO05D005597 1.1e-06 59.3 114 48.2
COL.COLO4_27264 Corchorus olitorius HOM05D004479 ORTHO05D005597 1.1e-06 59.3 59 50.8
QL03p033134 Quercus lobata HOM05D004479 ORTHO05D005597 1.1e-06 59.3 50 72.0
SHI36675 Sapria himalayana HOM05D004479 ORTHO05D005597 1.5e-06 58.9 54 59.3
SHI13126 Sapria himalayana HOM05D000105 ORTHO05D000023 9.6e-06 56.2 59 55.9


User provided reference genes

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