Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 3.1e-105 385.2 203 100.0
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 3.0e-47 192.6 213 52.1
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 2.8e-45 186.0 217 47.9
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 3.6e-45 185.7 221 48.0
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 4.8e-45 185.3 211 50.2
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 2.4e-44 183.0 211 47.4
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 6.9e-44 181.4 210 49.5
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 6.9e-44 181.4 214 49.1
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.2e-43 180.6 215 48.8
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 2.6e-43 179.5 232 46.6
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 3.4e-43 179.1 214 46.7
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 7.6e-43 177.9 208 47.6
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 9.9e-43 177.6 209 45.5
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 1.3e-42 177.2 214 48.1
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 3.8e-42 175.6 210 51.4
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 4.9e-42 175.3 204 46.6
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 6.4e-42 174.9 202 48.0
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 6.4e-42 174.9 210 47.6
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 1.4e-41 173.7 137 64.2
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 1.4e-41 173.7 217 47.9
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 1.9e-41 173.3 206 48.1
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 1.9e-41 173.3 217 47.9
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 2.4e-41 172.9 212 47.6
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 3.2e-41 172.6 208 47.6
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 4.2e-41 172.2 216 44.9
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 5.5e-41 171.8 210 50.5
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 5.5e-41 171.8 110 71.8
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 7.1e-41 171.4 201 49.3
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 2.1e-40 169.9 210 48.6
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 4.6e-40 168.7 210 46.7
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 6.0e-40 168.3 205 51.2
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 6.0e-40 168.3 210 49.0
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 6.0e-40 168.3 108 72.2
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 7.9e-40 167.9 211 50.2
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 1.0e-39 167.5 212 44.8
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 1.3e-39 167.2 233 44.2
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 1.3e-39 167.2 223 45.3
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 2.3e-39 166.4 219 51.1
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 3.0e-39 166.0 110 71.8
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 5.1e-39 165.2 215 51.2
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 5.1e-39 165.2 200 47.0
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 8.7e-39 164.5 205 46.8
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 8.7e-39 164.5 205 46.8
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 8.7e-39 164.5 205 46.8
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 8.7e-39 164.5 205 46.8
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 1.1e-38 164.1 210 47.1
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 3.3e-38 162.5 215 52.1
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 3.3e-38 162.5 215 51.2
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 3.3e-38 162.5 220 47.3
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 4.3e-38 162.2 109 72.5
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 5.6e-38 161.8 216 45.8
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 5.6e-38 161.8 108 68.5
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 2.1e-37 159.8 207 48.8
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 2.1e-37 159.8 130 63.1
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 2.8e-37 159.5 130 60.0
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 1.1e-36 157.5 124 62.1
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 1.8e-36 156.8 220 48.2
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 5.3e-36 155.2 110 65.5
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 5.3e-36 155.2 110 65.5
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 9.0e-36 154.5 112 64.3
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.2e-35 154.1 205 44.9
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 2.0e-35 153.3 205 44.4
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 3.4e-35 152.5 105 68.6
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 4.5e-35 152.1 233 41.2
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 4.5e-35 152.1 199 41.7
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 2.2e-34 149.8 198 44.4
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 2.2e-34 149.8 119 61.3
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 2.2e-34 149.8 110 62.7
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 3.8e-34 149.1 137 57.7
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 8.4e-34 147.9 205 42.9
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 1.4e-33 147.1 200 45.0
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 3.2e-33 146.0 212 39.6
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 3.2e-33 146.0 204 46.6
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.2e-33 146.0 134 55.2
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 4.2e-33 145.6 206 42.7
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 1.6e-32 143.7 108 61.1
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.6e-32 143.7 112 61.6
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.7e-32 142.9 112 62.5
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 2.5e-30 136.3 122 53.3
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 6.3e-29 131.7 111 59.5
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 2.9e-26 122.9 198 39.4
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 1.4e-25 120.6 156 47.4
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 1.9e-25 120.2 203 36.5
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 3.2e-25 119.4 103 58.3
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 2.7e-24 116.3 218 35.3
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 3.9e-23 112.5 205 33.2
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 1.1e-22 110.9 122 46.7
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 1.9e-22 110.2 137 45.3
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 3.3e-22 109.4 89 57.3
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.7e-21 105.9 120 48.3
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 4.8e-21 105.5 122 48.4
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 1.1e-20 104.4 250 30.8
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 5.9e-19 98.6 216 32.9
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 5.5e-17 92.0 215 32.6
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 1.3e-10 70.9 148 37.2
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 6.5e-10 68.6 55 56.4
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 4.7e-08 62.4 47 59.6
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 5.7e-06 55.5 54 51.9


User provided reference genes

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