Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049628.2 Olea europaea HOM05D005569 ORTHO05D007052 7.6e-101 370.5 192 100.0
Nitab4.5_0001708g0020 Nicotiana tabacum HOM05D005569 ORTHO05D007052 9.4e-51 204.1 125 80.8
arahy.Tifrunner.gnm1.ann1.0XD544 Arachis hypogaea HOM05D005569 ORTHO05D007052 2.7e-50 202.6 124 82.3
CAN.G1445.2 Capsicum annuum HOM05D005569 ORTHO05D007052 2.7e-50 202.6 123 80.5
Eucgr.J00350 Eucalyptus grandis HOM05D005569 ORTHO05D007052 3.6e-50 202.2 124 82.3
Hma1.2p1_1111F.1_g258450 Hydrangea macrophylla HOM05D005569 ORTHO05D007052 3.6e-50 202.2 124 83.1
Nitab4.5_0007226g0010 Nicotiana tabacum HOM05D005569 ORTHO05D007052 3.6e-50 202.2 125 80.8
HanXRQChr10g0311221 Helianthus annuus HOM05D005569 ORTHO05D007052 4.7e-50 201.8 129 79.8
Sopen08g026060 Solanum pennellii HOM05D005569 ORTHO05D007052 4.7e-50 201.8 123 81.3
Actinidia00647 Actinidia chinensis HOM05D005569 ORTHO05D007052 6.1e-50 201.4 122 82.8
arahy.Tifrunner.gnm1.ann1.DT0EHL Arachis hypogaea HOM05D005569 ORTHO05D007052 6.1e-50 201.4 124 82.3
PGSC0003DMG400001840 Solanum tuberosum HOM05D005569 ORTHO05D007052 6.1e-50 201.4 123 80.5
Lj3g0021821 Lotus japonicus HOM05D005569 ORTHO05D007052 7.9e-50 201.1 124 80.6
Migut.D00888 Erythranthe guttata HOM05D005569 ORTHO05D007052 1.0e-49 200.7 127 80.3
Solyc08g077470.4 Solanum lycopersicum HOM05D005569 ORTHO05D007052 1.0e-49 200.7 123 80.5
Nn8g41003 Nelumbo nucifera HOM05D005569 ORTHO05D007052 1.4e-49 200.3 124 80.6
HanXRQChr12g0359721 Helianthus annuus HOM05D005569 ORTHO05D007052 3.0e-49 199.1 125 78.4
Lsat_1_v5_gn_5_137201 Lactuca sativa HOM05D005569 ORTHO05D007052 3.0e-49 199.1 127 79.5
CiPaw.01G208600 Carya illinoinensis HOM05D005569 ORTHO05D007052 3.9e-49 198.7 124 79.8
Ciclev10032913m.g Citrus clementina HOM05D005569 ORTHO05D007052 3.9e-49 198.7 124 82.3
GSVIVG01029554001 Vitis vinifera HOM05D005569 ORTHO05D007052 3.9e-49 198.7 124 78.2
ECA234G1813 Erigeron canadensis HOM05D005569 ORTHO05D007052 5.1e-49 198.4 131 76.3
RcHm_v2.0_Chr2g0149331 Rosa chinensis HOM05D005569 ORTHO05D007052 5.1e-49 198.4 124 81.5
MSTRG.4523 Avicennia marina HOM05D005569 ORTHO05D007052 6.7e-49 198.0 127 78.7
MSTRG.9559 Avicennia marina HOM05D005569 ORTHO05D007052 6.7e-49 198.0 127 80.3
Prupe.3G023400 Prunus persica HOM05D005569 ORTHO05D007052 8.8e-49 197.6 124 80.6
SGA_v2.0_scaffold4G02105 Striga asiatica HOM05D005569 ORTHO05D007052 8.8e-49 197.6 127 80.3
ClCG09G020780 Citrullus lanatus HOM05D005569 ORTHO05D007052 1.1e-48 197.2 124 79.0
TAR626G0082 Trochodendron aralioides HOM05D005569 ORTHO05D007052 1.1e-48 197.2 124 79.8
EL10Ac7g18137 Beta vulgaris HOM05D005569 ORTHO05D007052 1.5e-48 196.8 131 74.0
MD09G1166000 Malus domestica HOM05D005569 ORTHO05D007052 1.5e-48 196.8 124 80.6
Nitab4.5_0003757g0060 Nicotiana tabacum HOM05D005569 ORTHO05D007052 2.0e-48 196.4 135 71.9
Sed0017383 Sechium edule HOM05D005569 ORTHO05D007052 2.0e-48 196.4 124 79.0
vmacro12582 Vaccinium macrocarpon HOM05D005569 ORTHO05D007052 2.0e-48 196.4 119 83.2
AUR62025672 Chenopodium quinoa HOM05D005569 ORTHO05D007052 2.6e-48 196.1 123 78.0
FAN09G0120 Fragaria x ananassa HOM05D005569 ORTHO05D007052 2.6e-48 196.1 124 81.5
Gohir.A05G114900 Gossypium hirsutum HOM05D005569 ORTHO05D007052 2.6e-48 196.1 123 82.1
Lj6P639T26 Lonicera japonica HOM05D005569 ORTHO05D007052 2.6e-48 196.1 117 82.9
MD17G1161700 Malus domestica HOM05D005569 ORTHO05D007052 2.6e-48 196.1 124 79.8
CsaV3_5G025600 Cucumis sativus L. HOM05D005569 ORTHO05D007052 4.4e-48 195.3 124 77.4
Thecc.06G056000 Theobroma cacao HOM05D005569 ORTHO05D007052 4.4e-48 195.3 124 79.8
FvH4_6g36900 Fragaria vesca HOM05D005569 ORTHO05D007052 5.7e-48 194.9 124 80.6
FAN14G0087 Fragaria x ananassa HOM05D000810 ORTHO05D003737 5.7e-48 194.9 124 80.6
FAN02G3798 Fragaria x ananassa HOM05D005569 ORTHO05D007052 7.4e-48 194.5 124 80.6
Gohir.D05G115300 Gossypium hirsutum HOM05D005569 ORTHO05D007052 7.4e-48 194.5 123 81.3
Gorai.009G119400 Gossypium raimondii HOM05D005569 ORTHO05D007052 7.4e-48 194.5 123 81.3
SalBow4G0561 Salvia bowleyana HOM05D005569 ORTHO05D007052 9.7e-48 194.1 128 77.3
Ca_20982_v3 Cicer arietinum L. HOM05D005569 ORTHO05D007052 1.3e-47 193.7 124 76.6
MELO3C002923.2 Cucumis melo HOM05D005569 ORTHO05D007052 1.3e-47 193.7 124 77.4
CiPaw.02G129100 Carya illinoinensis HOM05D005569 ORTHO05D007052 1.7e-47 193.4 124 79.8
CDE07G0675 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 1.7e-47 193.4 124 76.6
Nitab4.5_0002354g0080 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.7e-47 193.4 121 76.9
Sc15g0001130 Simmondsia chinensis HOM05D005569 ORTHO05D007052 2.2e-47 193.0 124 78.2
PSO063G3520 Papaver somniferum HOM05D005569 ORTHO05D007052 2.8e-47 192.6 124 77.4
PSO170G0292 Papaver somniferum HOM05D005569 ORTHO05D007052 2.8e-47 192.6 124 77.4
CDE04G0659 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 3.7e-47 192.2 124 75.0
Manes.06G179601 Manihot esculenta HOM05D005569 ORTHO05D007052 3.7e-47 192.2 122 79.5
Potri.008G004200 Populus trichocarpa HOM05D005569 ORTHO05D007052 3.7e-47 192.2 122 78.7
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 4.8e-47 191.8 123 78.9
Aqoxy7G02714 Aquilegia oxysepala HOM05D005569 ORTHO05D007052 1.4e-46 190.3 124 77.4
AL2G39310 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 1.8e-46 189.9 124 78.2
CSS0046788 Camellia sinensis var. sinensis HOM05D005569 ORTHO05D007052 1.8e-46 189.9 122 77.9
Cpa.g.sc176.7 Carica papaya HOM05D005569 ORTHO05D007052 4.1e-46 188.7 124 75.0
Psat7g265160 Pisum sativum HOM05D005569 ORTHO05D007052 4.1e-46 188.7 124 74.2
Hund05672 Selenicereus undatus HOM05D005569 ORTHO05D007052 4.1e-46 188.7 123 75.6
AT1G78895 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 5.3e-46 188.3 124 77.4
CARHR072480 Cardamine hirsuta HOM05D005569 ORTHO05D007052 7.0e-46 188.0 124 76.6
QL05p088862 Quercus lobata HOM05D005569 ORTHO05D007052 7.0e-46 188.0 118 79.7
Carub.0002s2572 Capsella rubella HOM05D005569 ORTHO05D007052 1.2e-45 187.2 124 76.6
PGSC0003DMG400026509 Solanum tuberosum HOM05D005569 ORTHO05D007052 1.2e-45 187.2 121 75.2
Medtr4g005340 Medicago truncatula HOM05D005569 ORTHO05D007052 2.0e-45 186.4 126 73.0
THA.LOC104808103 Tarenaya hassleriana HOM05D005569 ORTHO05D007052 2.6e-45 186.0 124 75.0
HPP92_023863 Vanilla planifolia HOM05D005569 ORTHO05D007052 5.9e-45 184.9 122 75.4
BcaB02g07184 Brassica carinata HOM05D005569 ORTHO05D007052 7.7e-45 184.5 123 75.6
Sopen06g022820 Solanum pennellii HOM05D005569 ORTHO05D007052 1.0e-44 184.1 121 73.6
TPR.G38774 Trifolium pratense HOM05D005569 ORTHO05D007052 1.3e-44 183.7 124 71.8
TWI75G0478 Tripterygium wilfordii HOM05D005569 ORTHO05D007052 1.3e-44 183.7 124 73.4
Sp5g33910 Schrenkiella parvula HOM05D005569 ORTHO05D007052 2.9e-44 182.6 124 74.2
VMungo0331G1663 Vigna mungo HOM05D005569 ORTHO05D007052 2.9e-44 182.6 123 75.6
CAN.G308.17 Capsicum annuum HOM05D005569 ORTHO05D007052 6.5e-44 181.4 121 72.7
PGR031G1139 Punica granatum HOM05D005569 ORTHO05D007052 6.5e-44 181.4 157 63.7
Thhalv10019242m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 8.5e-44 181.0 124 74.2
Glyma.07G001900 Glycine max HOM05D005569 ORTHO05D007052 1.1e-43 180.6 124 72.6
AT1G16825 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 1.9e-43 179.9 124 74.2
FAN05G2575 Fragaria x ananassa HOM05D005569 ORTHO05D007052 2.5e-43 179.5 153 65.4
BcaC08g45404 Brassica carinata HOM05D005569 ORTHO05D007052 3.2e-43 179.1 124 75.0
C06p30360 Brassica napus HOM05D005569 ORTHO05D007052 3.2e-43 179.1 124 75.0
Aa31LG4G2110 Aethionema arabicum HOM05D005569 ORTHO05D007052 7.2e-43 177.9 124 75.0
A07p27440 Brassica napus HOM05D005569 ORTHO05D007052 7.2e-43 177.9 124 74.2
BraA07t30385Z Brassica rapa HOM05D005569 ORTHO05D007052 7.2e-43 177.9 124 74.2
Carub.0001s1656 Capsella rubella HOM05D005569 ORTHO05D007052 7.2e-43 177.9 124 73.4
Sp1g14960 Schrenkiella parvula HOM05D005569 ORTHO05D007052 9.4e-43 177.6 124 73.4
BolC6t38199H Brassica oleracea HOM05D005569 ORTHO05D007052 1.2e-42 177.2 124 74.2
SEGI_33936 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 1.2e-42 177.2 121 71.1
AL1G28990 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 1.6e-42 176.8 124 73.4
Lalb_Chr01g0011651 Lupinus albus HOM05D005569 ORTHO05D007052 2.1e-42 176.4 123 72.4
CARHR017290 Cardamine hirsuta HOM05D005569 ORTHO05D007052 2.7e-42 176.0 124 71.8
Hund18590 Selenicereus undatus HOM05D005569 ORTHO05D007052 6.1e-42 174.9 123 69.9
Actinidia31124 Actinidia chinensis HOM05D005569 ORTHO05D007052 1.4e-41 173.7 113 78.8
BcaC07g41383 Brassica carinata HOM05D005569 ORTHO05D007052 2.3e-41 172.9 124 71.8
A09p60680 Brassica napus HOM05D005569 ORTHO05D007052 6.7e-41 171.4 128 70.3
Zm00001eb414080 Zea mays HOM05D005569 ORTHO05D007052 8.8e-41 171.0 121 72.7
BraA09t41445Z Brassica rapa HOM05D005569 ORTHO05D007052 1.5e-40 170.2 127 70.9
AUR62001332 Chenopodium quinoa HOM05D005569 ORTHO05D007052 1.5e-40 170.2 105 81.9
C08p44280 Brassica napus HOM05D005569 ORTHO05D007052 4.4e-40 168.7 128 69.5
BcaC07g41456 Brassica carinata HOM05D005569 ORTHO05D007052 9.7e-40 167.5 127 70.1
BolC8t51973H Brassica oleracea HOM05D005569 ORTHO05D007052 9.7e-40 167.5 127 70.1
DCAR_028944 Daucus carota HOM05D005569 ORTHO05D007052 6.3e-39 164.9 102 80.4
Haze_16187 Corylus avellana HOM05D005569 ORTHO05D007052 1.1e-38 164.1 99 81.8
MBI16_g18210_MAGBIO Magnolia biondii HOM05D005569 ORTHO05D007052 1.8e-38 163.3 100 78.0
Peaxi162Scf00084g00024 Petunia axillaris HOM05D005569 ORTHO05D007052 1.8e-38 163.3 96 84.4
Phvul.010G164400 Phaseolus vulgaris HOM05D005569 ORTHO05D007052 5.3e-38 161.8 119 70.6
SEGI_27689 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 1.6e-37 160.2 119 66.4
CANSAT01G2461 Cannabis sativa HOM05D005569 ORTHO05D007052 5.0e-36 155.2 102 71.6
SMO215G0002 Selaginella moellendorffii HOM05D005569 ORTHO05D007052 3.2e-35 152.5 118 66.1
Sabra08G0001800 Salix brachista HOM05D005569 ORTHO05D007052 4.2e-35 152.1 102 78.4
Thhalv10009539m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 1.2e-32 144.1 100 74.0
Pp3c8_16360 Physcomitrium patens HOM05D005569 ORTHO05D007052 1.3e-31 140.6 120 61.7
Os08g0225100 Oryza sativa ssp. japonica HOM05D005569 ORTHO05D007052 2.2e-31 139.8 89 79.8
Mapoly0045s0143 Marchantia polymorpha HOM05D005569 ORTHO05D007052 4.1e-30 135.6 117 56.4
Cc04_g00060 Coffea canephora HOM05D005569 ORTHO05D007052 3.2e-27 125.9 75 82.7
Atru.chr1.2818 Acer truncatum HOM05D005569 ORTHO05D007052 8.8e-25 117.9 78 75.6
Prupe.3G058300 Prunus persica HOM05D005569 ORTHO05D007052 2.0e-24 116.7 82 72.0
Duzib192G1047 Durio zibethinus HOM05D005569 ORTHO05D007052 8.3e-23 111.3 71 78.9
ATR0626G016 Amborella trichopoda HOM05D005569 ORTHO05D007052 3.1e-22 109.4 72 76.4
Pp3c24_12140 Physcomitrium patens HOM05D005569 ORTHO05D007052 1.0e-20 104.4 86 66.3
CBR_g40779 Chara braunii HOM05D005569 ORTHO05D007052 3.0e-17 92.8 130 44.6
CBR_g49429 Chara braunii HOM05D005569 ORTHO05D007052 2.6e-16 89.7 130 40.8
unitig_899.g14763 Utricularia gibba HOM05D000070 ORTHO05D003301 1.3e-15 87.4 53 81.1
CBR_g41646 Chara braunii HOM05D000785 ORTHO05D000231 1.7e-15 87.0 125 40.8
Duzib235G0081 Durio zibethinus HOM05D005569 ORTHO05D007052 1.6e-13 80.5 139 39.6
HPP92_023858 Vanilla planifolia HOM05D005569 ORTHO05D007052 5.0e-12 75.5 51 68.6
BcaC07g41384 Brassica carinata HOM05D005569 ORTHO05D007052 7.3e-11 71.6 83 50.6
SEGI_34083 Sequoiadendron giganteum HOM05D000074 ORTHO05D000220 3.6e-10 69.3 50 68.0
C08p44240 Brassica napus HOM05D005569 ORTHO05D007052 5.8e-08 62.0 48 64.6
BolC8t51970H Brassica oleracea HOM05D005569 ORTHO05D007052 5.8e-08 62.0 48 64.6
VMungo0464G0531 Vigna mungo HOM05D000289 ORTHO05D000208 5.4e-06 55.5 128 31.2
PSO339G4416 Papaver somniferum HOM05D000289 ORTHO05D000208 9.2e-06 54.7 118 33.1


User provided reference genes

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