Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 3.8e-51 204.5 101 100.0
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 6.9e-37 157.1 102 80.4
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 4.8e-30 134.4 99 65.7
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 3.9e-24 114.8 99 57.6
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 6.9e-21 104.0 102 56.9
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 5.9e-20 100.9 115 53.0
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.4e-18 96.3 101 52.5
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.4e-18 96.3 101 51.5
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 2.1e-17 92.4 102 52.9
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 1.4e-16 89.7 118 43.2
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.8e-16 89.4 101 55.4
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.8e-16 89.4 101 55.4
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.8e-16 89.4 101 51.5
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 2.3e-16 89.0 110 47.3
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 2.3e-16 89.0 96 52.1
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 3.0e-16 88.6 101 47.5
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 3.9e-16 88.2 99 48.5
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 5.1e-16 87.8 110 47.3
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 1.1e-15 86.7 108 45.4
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 1.1e-15 86.7 116 43.1
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.1e-15 86.7 114 44.7
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.1e-15 86.7 114 44.7
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.5e-15 86.3 114 44.7
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.6e-15 85.5 99 45.5
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.6e-15 85.5 99 45.5
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.6e-15 85.5 99 45.5
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 4.4e-15 84.7 90 53.3
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.4e-15 84.7 99 44.4
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 4.4e-15 84.7 87 56.3
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.7e-15 84.3 99 44.4
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 7.4e-15 84.0 101 46.5
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 9.7e-15 83.6 103 46.6
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 1.3e-14 83.2 99 46.5
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 1.7e-14 82.8 96 47.9
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 1.7e-14 82.8 100 45.0
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 2.2e-14 82.4 99 45.5
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 3.7e-14 81.6 100 52.0
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 3.7e-14 81.6 114 45.6
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 3.7e-14 81.6 109 45.0
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 4.8e-14 81.3 102 43.1
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 4.8e-14 81.3 98 45.9
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 4.8e-14 81.3 103 48.5
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 6.3e-14 80.9 91 51.6
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 6.3e-14 80.9 99 44.4
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.3e-14 80.9 110 45.5
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 6.3e-14 80.9 99 45.5
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.2e-14 80.5 110 45.5
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 8.2e-14 80.5 105 45.7
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 1.1e-13 80.1 105 44.8
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 1.4e-13 79.7 99 45.5
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 1.4e-13 79.7 100 46.0
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 1.8e-13 79.3 99 45.5
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 2.4e-13 79.0 99 42.4
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 3.1e-13 78.6 90 51.1
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.1e-13 78.6 124 40.3
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 4.1e-13 78.2 99 47.5
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 4.1e-13 78.2 96 45.8
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 4.1e-13 78.2 110 45.5
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 7.0e-13 77.4 100 47.0
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 7.0e-13 77.4 89 52.8
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 7.0e-13 77.4 99 43.4
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 9.1e-13 77.0 112 41.1
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 9.1e-13 77.0 97 43.3
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.6e-12 76.3 123 38.2
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 1.6e-12 76.3 102 50.0
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.6e-12 76.3 95 47.4
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 2.6e-12 75.5 96 50.0
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 3.5e-12 75.1 120 42.5
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 5.9e-12 74.3 106 45.3
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 7.7e-12 73.9 100 45.0
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.0e-11 73.6 101 40.6
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 1.3e-11 73.2 115 44.3
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.3e-11 73.2 104 45.2
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 1.7e-11 72.8 101 47.5
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.7e-11 72.8 99 45.5
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.7e-11 72.8 123 36.6
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.2e-11 72.4 101 47.5
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 2.2e-11 72.4 103 44.7
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 2.9e-11 72.0 99 40.4
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 3.8e-11 71.6 105 40.0
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 3.8e-11 71.6 101 41.6
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 5.0e-11 71.2 99 42.4
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 6.5e-11 70.9 97 40.2
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 8.5e-11 70.5 101 43.6
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 8.5e-11 70.5 97 48.5
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 1.1e-10 70.1 100 42.0
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.1e-10 70.1 100 42.0
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 1.5e-10 69.7 91 49.5
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 3.2e-10 68.6 113 40.7
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 4.2e-10 68.2 111 39.6
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 5.5e-10 67.8 118 39.0
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 5.5e-10 67.8 100 42.0
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 5.5e-10 67.8 105 41.9
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.2e-09 66.6 102 42.2
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 2.1e-09 65.9 117 38.5
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.1e-09 65.9 96 47.9
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 6.1e-09 64.3 96 43.8
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 8.0e-09 63.9 117 41.0
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 8.0e-09 63.9 91 44.0
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 1.0e-08 63.5 94 40.4
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 1.0e-08 63.5 96 40.6
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 1.4e-08 63.2 95 38.9
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 1.8e-08 62.8 115 34.8
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 2.3e-08 62.4 95 43.2
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 3.0e-08 62.0 108 39.8
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 3.0e-08 62.0 96 46.9
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 3.0e-08 62.0 96 41.7
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 6.7e-08 60.8 102 37.3
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 6.7e-08 60.8 99 38.4
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 1.1e-07 60.1 44 59.1
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 1.1e-07 60.1 99 40.4
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 1.1e-07 60.1 97 41.2
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 3.3e-07 58.5 106 41.5
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 4.4e-07 58.2 94 40.4
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 4.4e-07 58.2 94 40.4
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 5.7e-07 57.8 95 41.1
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 7.5e-07 57.4 91 39.6
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 7.5e-07 57.4 91 39.6
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 9.7e-07 57.0 102 39.2
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.3e-06 56.6 102 41.2
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 2.8e-06 55.5 123 34.1
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 3.7e-06 55.1 94 38.3
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 8.2e-06 53.9 91 37.4


User provided reference genes

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