Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 0.0e+00 1772.7 912 100.0
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 4.4e-167 592.8 903 44.1
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 1.1e-157 561.6 917 42.0
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 4.5e-143 513.1 899 41.8
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 3.1e-136 490.3 892 41.1
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 1.5e-135 488.0 904 39.8
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 2.5e-133 480.7 976 38.1
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 2.2e-126 457.6 902 39.5
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 2.6e-119 434.1 923 36.5
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 3.5e-119 433.7 909 37.1
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 5.9e-119 433.0 907 36.7
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 3.2e-117 427.2 923 36.6
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 7.2e-117 426.0 937 37.4
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 1.8e-115 421.4 858 38.2
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 1.4e-112 411.8 879 35.5
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 5.0e-110 403.3 844 38.0
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 6.8e-107 392.9 893 34.9
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 7.7e-103 379.4 895 34.0
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 2.9e-102 377.5 886 35.8
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 3.8e-102 377.1 714 38.1
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 8.5e-102 375.9 1019 33.0
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.1e-101 375.6 651 41.8
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 7.2e-101 372.9 899 34.6
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 2.8e-100 370.9 891 36.0
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 1.8e-99 368.2 880 33.8
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 1.2e-98 365.5 511 44.8
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 2.8e-97 360.9 928 33.9
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 9.2e-96 355.9 887 33.1
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 2.7e-95 354.4 897 33.4
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 2.3e-94 351.3 915 33.6
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 1.1e-93 349.0 884 32.9
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 2.5e-93 347.8 906 34.4
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.3e-93 347.4 882 32.5
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 8.9e-91 339.3 904 33.8
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 3.4e-90 337.4 893 33.4
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 3.4e-90 337.4 893 33.7
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.2e-89 334.7 905 31.7
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.7e-89 334.0 908 32.2
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 8.3e-89 332.8 885 32.3
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 8.3e-89 332.8 539 41.0
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 7.0e-88 329.7 923 32.6
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 3.3e-85 320.9 536 39.2
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.6e-84 318.5 638 37.1
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 1.6e-84 318.5 901 31.6
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 2.1e-84 318.2 950 31.3
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 8.9e-83 312.8 558 40.9
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 1.2e-82 312.4 768 34.6
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 1.1e-80 305.8 568 38.4
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 1.4e-80 305.4 574 38.0
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 2.4e-80 304.7 620 35.6
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 9.2e-80 302.8 497 40.0
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 6.0e-79 300.1 587 37.6
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 1.0e-78 299.3 840 32.3
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.0e-78 299.3 878 31.9
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 7.3e-77 293.1 879 31.1
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 9.5e-77 292.7 489 39.5
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 4.7e-76 290.4 889 29.1
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 2.3e-75 288.1 887 32.5
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 5.2e-75 287.0 839 31.6
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 7.5e-74 283.1 293 51.2
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 2.2e-73 281.6 891 30.5
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 4.9e-73 280.4 906 30.6
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 1.9e-72 278.5 906 31.0
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 1.2e-71 275.8 940 28.5
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 6.0e-71 273.5 613 34.9
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 1.5e-69 268.9 628 33.9
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 1.4e-67 262.3 706 31.7
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 2.3e-67 261.5 917 29.0
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.5e-66 258.8 554 37.5
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 1.5e-66 258.8 763 29.4
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 4.4e-66 257.3 918 28.4
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 4.1e-64 250.8 592 34.5
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 4.6e-63 247.3 566 35.5
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 1.7e-62 245.4 930 28.6
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 5.1e-62 243.8 834 28.8
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 1.5e-61 242.3 902 28.8
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 2.5e-61 241.5 673 32.5
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 4.7e-60 237.3 460 33.9
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 1.1e-59 236.1 609 33.0
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 9.9e-58 229.6 486 37.2
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 9.9e-58 229.6 665 30.5
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 1.3e-54 219.2 952 26.1
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 2.3e-54 218.4 689 32.8
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 6.2e-52 210.3 558 31.7
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 6.2e-52 210.3 558 31.7
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 2.4e-51 208.4 533 31.7
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 4.9e-49 200.7 594 29.8
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 6.4e-49 200.3 648 27.5
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 8.4e-49 199.9 823 28.6
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 3.2e-48 198.0 648 27.5
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 4.2e-48 197.6 533 31.3
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 5.4e-48 197.2 801 26.7
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 5.4e-48 197.2 537 30.7
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 7.1e-48 196.8 623 29.9
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 6.0e-47 193.7 627 28.9
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 1.8e-43 182.2 437 31.8
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 1.8e-43 182.2 519 30.4
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 4.0e-43 181.0 698 28.7
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 4.5e-42 177.6 427 33.7
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 2.9e-41 174.9 541 30.1
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 6.4e-41 173.7 590 30.5
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 1.4e-40 172.6 617 28.5
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 3.5e-39 167.9 617 27.6
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 7.9e-39 166.8 640 27.5
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 1.3e-38 166.0 692 29.9
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 5.1e-38 164.1 162 48.8
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 2.0e-34 152.1 447 33.1
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 7.7e-18 97.1 121 48.8
Dinv43435 Davidia involucrata HOM05D001393 ORTHO05D007477 2.5e-16 92.0 280 34.6
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 3.6e-15 88.2 187 38.5
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 2.4e-11 75.5 377 22.3
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 2.4e-11 75.5 377 22.3
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.0e-09 70.1 512 22.7
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 3.2e-08 65.1 228 28.1
FvH4_5g06191 Fragaria vesca HOM05D001393 ORTHO05D007477 2.1e-07 62.4 78 43.6


User provided reference genes

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