Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 0.0e+00 1694.5 945 100.0
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 2.2e-201 706.8 973 51.7
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 3.5e-175 619.8 988 46.6
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 6.4e-169 599.0 972 45.6
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 1.2e-167 594.7 965 45.3
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 2.3e-166 590.5 984 43.9
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 3.3e-165 586.6 1012 44.2
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 3.3e-165 586.6 1012 44.3
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 6.2e-164 582.4 998 43.3
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 3.3e-157 560.1 990 44.2
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 3.8e-153 546.6 997 43.3
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 8.4e-153 545.4 1017 40.9
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 8.4e-153 545.4 993 43.0
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 4.2e-152 543.1 994 43.8
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 7.4e-149 532.3 1005 42.0
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 1.3e-148 531.6 995 42.6
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 4.2e-144 516.5 889 45.7
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 3.6e-143 513.5 836 43.8
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 2.0e-141 507.7 976 40.4
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 1.4e-139 501.5 1030 40.2
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 3.2e-136 490.3 1004 40.4
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 7.2e-136 489.2 995 40.1
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 1.3e-132 478.4 1045 38.9
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 1.1e-131 475.3 1000 40.1
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 2.2e-129 467.6 934 40.7
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 5.0e-129 466.5 972 41.3
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 8.5e-129 465.7 981 38.9
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 8.5e-129 465.7 1115 39.2
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.9e-128 464.5 987 38.8
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 2.1e-127 461.1 982 39.5
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 2.7e-127 460.7 980 38.8
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 1.8e-126 458.0 1030 37.6
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 5.7e-125 453.0 986 37.7
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 9.7e-125 452.2 1000 39.4
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 1.8e-123 448.0 995 41.3
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 1.8e-123 448.0 992 41.1
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 2.4e-123 447.6 1004 37.3
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 3.1e-123 447.2 865 41.2
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 9.1e-123 445.7 997 37.4
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 1.6e-122 444.9 994 41.0
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 3.5e-122 443.7 1010 39.3
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 7.7e-122 442.6 937 38.7
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 1.6e-119 434.9 933 38.5
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 1.4e-118 431.8 928 38.6
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 4.8e-116 423.3 932 36.8
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 6.3e-116 422.9 1000 35.2
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 7.0e-115 419.5 1016 38.3
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 2.7e-114 417.5 974 38.7
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 1.7e-113 414.8 953 38.0
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 2.7e-111 407.5 984 37.2
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 9.8e-109 399.1 992 36.0
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 3.7e-108 397.1 978 35.7
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 4.8e-108 396.7 981 36.2
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 6.3e-108 396.4 985 37.1
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 6.3e-108 396.4 1037 37.9
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 8.3e-108 396.0 983 35.3
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 1.4e-107 395.2 998 35.6
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 7.0e-107 392.9 794 41.6
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 2.7e-106 391.0 865 38.7
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 1.0e-105 389.0 977 36.1
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 6.6e-105 386.3 1001 35.4
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 1.9e-104 384.8 968 37.6
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 1.6e-103 381.7 1035 34.6
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 3.6e-103 380.6 998 34.3
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 6.1e-103 379.8 982 35.8
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 8.9e-102 375.9 1010 35.3
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 2.6e-101 374.4 1016 35.9
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 3.4e-101 374.0 914 37.2
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 7.5e-101 372.9 1077 35.1
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 3.9e-97 360.5 1019 35.8
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 3.9e-97 360.5 995 34.6
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 1.9e-96 358.2 984 38.2
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 1.8e-94 351.7 950 35.1
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 2.0e-93 348.2 1021 34.2
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 2.2e-92 344.7 1024 34.0
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 3.2e-91 340.9 1070 36.0
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 7.0e-91 339.7 834 37.6
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 1.3e-89 335.5 997 33.7
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 1.7e-89 335.1 977 34.7
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 8.6e-89 332.8 991 34.5
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 1.5e-88 332.0 975 35.3
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 2.5e-88 331.3 884 34.3
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 5.6e-88 330.1 988 35.3
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 2.1e-87 328.2 857 37.1
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 1.1e-86 325.9 1001 35.3
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 2.3e-86 324.7 1049 33.6
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 2.0e-85 321.6 881 33.6
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 1.3e-84 318.9 1033 34.2
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 3.7e-84 317.4 1008 34.9
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 4.9e-84 317.0 846 35.2
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 5.1e-81 307.0 768 38.9
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 1.2e-77 295.8 1006 33.7
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 1.7e-76 292.0 1039 30.8
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 2.7e-74 284.6 924 33.7
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 4.6e-74 283.9 993 31.1
Oeu017995.1 Olea europaea HOM05D005351 ORTHO05D006542 4.6e-74 283.9 671 36.2
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 7.3e-72 276.6 1037 30.8
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 2.1e-71 275.0 978 31.3
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 1.2e-69 269.2 953 33.5
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 3.4e-69 267.7 261 61.3
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 2.9e-68 264.6 937 33.1
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 5.4e-67 260.4 832 31.2
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 1.2e-66 259.2 875 30.7
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 2.7e-66 258.1 1091 31.0
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 7.8e-66 256.5 635 39.1
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 1.0e-65 256.1 1030 29.9
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 6.2e-63 246.9 910 31.6
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 5.8e-61 240.4 806 30.8
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 9.9e-61 239.6 995 30.4
CSS0030315 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 2.4e-51 208.4 432 37.5
CSS0028997 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 7.1e-51 206.8 424 37.7
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 1.3e-47 196.1 942 29.6
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 5.7e-40 170.6 956 26.5
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 2.2e-36 158.7 154 56.5
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 9.3e-35 153.3 872 26.4
Hma1.2p1_3473F.1_g336240 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 1.6e-31 142.5 306 44.1
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 1.1e-30 139.8 110 62.7
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 9.4e-27 126.7 121 53.7
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 2.0e-24 119.0 1091 24.8
Hma1.2p1_3473F.1_g336230 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 2.8e-23 115.2 101 64.4
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 1.5e-21 109.4 107 52.3
Lsat_1_v5_gn_6_88041 Lactuca sativa HOM05D005351 ORTHO05D006542 3.8e-20 104.8 245 33.9
PSO782G1978 Papaver somniferum HOM05D005351 ORTHO05D006542 3.8e-20 104.8 428 31.8
CiPaw.12G140800 Carya illinoinensis HOM05D005351 ORTHO05D006542 1.4e-17 96.3 136 47.8
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 1.5e-16 92.8 73 56.2
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 2.2e-15 89.0 80 61.2
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 6.3e-15 87.4 1063 24.8
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 3.5e-13 81.6 133 36.8
Solyc10g005860.3 Solanum lycopersicum HOM05D005351 ORTHO05D006542 2.2e-12 79.0 60 73.3
Peaxi162Scf00018g00154 Petunia axillaris HOM05D005351 ORTHO05D006542 2.9e-12 78.6 60 75.0
Oeu027265.1 Olea europaea HOM05D005351 ORTHO05D006542 8.5e-12 77.0 46 82.6
Cre09.g388430 Chlamydomonas reinhardtii HOM05D005351 ORTHO05D006542 1.0e-09 70.1 151 30.5
Cc00_g23250 Coffea canephora HOM05D000874 ORTHO05D001049 7.5e-08 63.9 41 65.9
MCO09G310 Micromonas commoda HOM05D005351 ORTHO05D006542 4.1e-06 58.2 135 28.9


User provided reference genes

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