Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 8.9e-75 283.5 141 100.0
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 8.1e-60 233.8 127 92.9
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 1.5e-53 213.0 128 85.9
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 8.1e-44 180.6 125 73.6
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 2.4e-43 179.1 128 71.9
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 1.5e-42 176.4 123 72.4
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 2.6e-42 175.6 128 71.1
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 2.6e-42 175.6 128 69.5
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 2.6e-42 175.6 124 71.8
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 3.4e-42 175.3 130 69.2
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 1.0e-41 173.7 127 70.9
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 1.0e-41 173.7 123 74.0
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 2.2e-41 172.6 126 70.6
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 3.8e-41 171.8 142 64.1
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 6.5e-41 171.0 124 70.2
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 1.9e-40 169.5 123 69.9
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 4.2e-40 168.3 129 69.8
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 4.2e-40 168.3 123 70.7
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 5.5e-40 167.9 124 70.2
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 5.5e-40 167.9 130 64.6
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 7.1e-40 167.5 128 69.5
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 1.2e-39 166.8 128 66.4
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 1.2e-39 166.8 125 70.4
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 1.2e-39 166.8 128 68.8
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 1.6e-39 166.4 123 69.1
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 1.6e-39 166.4 123 69.1
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 2.7e-39 165.6 129 69.0
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 3.5e-39 165.2 123 69.9
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 3.5e-39 165.2 124 70.2
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 4.6e-39 164.9 123 66.7
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 4.6e-39 164.9 123 66.7
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 4.6e-39 164.9 123 66.7
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 4.6e-39 164.9 123 69.1
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 6.0e-39 164.5 123 68.3
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 7.9e-39 164.1 131 69.5
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 7.9e-39 164.1 131 69.5
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 7.9e-39 164.1 123 67.5
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 7.9e-39 164.1 124 69.4
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 1.3e-38 163.3 128 66.4
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 1.8e-38 162.9 124 67.7
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 1.8e-38 162.9 124 67.7
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 1.8e-38 162.9 126 67.5
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 3.0e-38 162.2 124 63.7
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 3.0e-38 162.2 125 68.0
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 3.0e-38 162.2 133 66.2
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 5.1e-38 161.4 127 70.9
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 6.7e-38 161.0 124 66.9
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 6.7e-38 161.0 123 69.1
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 6.7e-38 161.0 123 68.3
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 8.7e-38 160.6 123 65.0
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 8.7e-38 160.6 124 66.1
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 8.7e-38 160.6 123 65.9
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 1.5e-37 159.8 127 69.3
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 1.9e-37 159.5 126 66.7
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 1.9e-37 159.5 125 65.6
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 1.9e-37 159.5 123 66.7
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 5.7e-37 157.9 123 65.0
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 7.4e-37 157.5 125 68.0
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 9.6e-37 157.1 125 64.0
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 1.6e-36 156.4 126 66.7
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 1.6e-36 156.4 125 64.0
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 1.6e-36 156.4 127 67.7
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 1.6e-36 156.4 124 68.5
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 2.1e-36 156.0 133 63.9
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 2.1e-36 156.0 124 67.7
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 4.8e-36 154.8 125 64.8
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 6.3e-36 154.5 129 62.0
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 1.1e-35 153.7 128 65.6
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 1.1e-35 153.7 126 61.9
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 4.1e-35 151.8 129 65.1
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 5.3e-35 151.4 125 63.2
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 6.9e-35 151.0 123 65.9
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 6.9e-35 151.0 123 64.2
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 1.5e-34 149.8 123 65.0
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 4.5e-34 148.3 126 62.7
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 4.5e-34 148.3 126 61.9
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 2.2e-33 146.0 126 62.7
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 5.0e-33 144.8 129 59.7
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 5.0e-33 144.8 123 64.2
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 8.5e-33 144.1 91 80.2
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 1.1e-32 143.7 123 63.4
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 1.4e-32 143.3 128 61.7
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 1.9e-32 142.9 127 61.4
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 1.9e-32 142.9 126 57.1
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 2.5e-32 142.5 129 59.7
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 3.2e-32 142.1 129 59.7
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 4.2e-32 141.7 125 63.2
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 9.3e-32 140.6 126 56.3
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 9.3e-32 140.6 124 57.3
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 1.2e-31 140.2 129 59.7
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 2.1e-31 139.4 128 57.8
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 2.1e-31 139.4 126 54.8
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 2.7e-31 139.0 126 62.7
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 2.7e-31 139.0 126 62.7
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 7.9e-31 137.5 124 60.5
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 7.9e-31 137.5 128 57.0
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 1.0e-30 137.1 123 56.1
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 1.3e-30 136.7 129 62.0
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 1.8e-30 136.3 123 61.0
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 2.3e-30 136.0 128 62.5
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 3.9e-30 135.2 128 60.9
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 5.1e-30 134.8 130 60.8
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 8.7e-30 134.0 125 60.0
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 1.5e-29 133.3 123 56.1
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 2.2e-28 129.4 123 58.5
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 4.8e-28 128.3 126 61.1
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 6.3e-28 127.9 134 51.5
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 1.4e-27 126.7 125 58.4
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 3.1e-27 125.6 129 56.6
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 3.1e-27 125.6 115 56.5
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 9.1e-27 124.0 124 54.8
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 1.5e-26 123.2 128 57.0
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 2.6e-26 122.5 111 56.8
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 1.0e-25 120.6 128 56.2
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 6.5e-25 117.9 89 71.9
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 6.5e-25 117.9 122 55.7
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 1.4e-24 116.7 136 50.0
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 3.9e-22 108.6 95 64.2
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 2.8e-20 102.4 109 54.1
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 3.1e-19 99.0 98 60.2
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 4.5e-18 95.1 127 43.3
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 2.2e-17 92.8 128 43.8
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 5.0e-17 91.7 126 42.1
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 1.4e-16 90.1 109 54.1
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 2.5e-16 89.4 103 56.3
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 3.0e-14 82.4 136 42.6
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 9.1e-11 70.9 90 45.6
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea HOM05D005924 ORTHO05D007290 2.6e-10 69.3 54 59.3
PSO210G6050 Papaver somniferum HOM05D000045 ORTHO05D000067 1.3e-09 67.0 77 51.9
C09p49910 Brassica napus HOM05D005924 ORTHO05D007290 1.6e-07 60.1 45 64.4
Zm00001eb019850 Zea mays HOM05D005924 ORTHO05D007290 4.0e-06 55.5 93 36.6


User provided reference genes

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