Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 2.0e-80 302.4 151 100.0
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 6.0e-61 237.7 144 84.0
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 3.3e-59 231.9 127 92.9
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 1.1e-49 200.3 140 72.9
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 3.4e-48 195.3 144 68.8
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 7.6e-48 194.1 140 70.7
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 1.0e-47 193.7 145 69.7
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 1.7e-47 193.0 142 72.5
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 2.9e-47 192.2 140 70.0
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 3.8e-47 191.8 140 70.0
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 8.4e-47 190.7 143 69.2
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 2.5e-46 189.1 143 68.5
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 4.2e-46 188.3 145 69.0
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 7.1e-46 187.6 142 68.3
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 1.6e-45 186.4 142 69.0
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 4.6e-45 184.9 141 68.1
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 7.9e-45 184.1 144 66.7
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 1.0e-44 183.7 142 68.3
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 3.0e-44 182.2 142 66.9
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 5.1e-44 181.4 147 64.6
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 5.1e-44 181.4 146 67.1
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 6.7e-44 181.0 143 67.1
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 6.7e-44 181.0 142 67.6
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 1.1e-43 180.3 142 66.9
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 1.9e-43 179.5 145 66.2
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 1.9e-43 179.5 146 67.1
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 3.3e-43 178.7 145 68.3
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 3.3e-43 178.7 145 68.3
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 3.3e-43 178.7 141 66.7
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 3.3e-43 178.7 141 66.7
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 3.3e-43 178.7 146 65.1
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 9.6e-43 177.2 143 63.6
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 9.6e-43 177.2 143 63.6
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 9.6e-43 177.2 144 67.4
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 1.3e-42 176.8 142 64.1
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 1.3e-42 176.8 145 67.6
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 1.6e-42 176.4 142 60.6
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 1.6e-42 176.4 140 65.7
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 1.6e-42 176.4 141 64.5
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 2.1e-42 176.0 143 67.1
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 4.8e-42 174.9 143 65.7
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 6.3e-42 174.5 143 62.9
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 8.2e-42 174.1 136 64.0
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 2.4e-41 172.6 146 63.0
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 9.0e-41 170.6 148 61.5
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 2.6e-40 169.1 144 63.2
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 2.6e-40 169.1 148 61.5
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 2.6e-40 169.1 143 65.0
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 3.4e-40 168.7 148 64.9
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 3.4e-40 168.7 126 69.0
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 3.4e-40 168.7 143 64.3
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 4.5e-40 168.3 127 67.7
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 4.5e-40 168.3 144 62.5
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 7.6e-40 167.5 143 58.0
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 1.0e-39 167.2 140 65.7
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 1.3e-39 166.8 123 69.9
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 2.2e-39 166.0 142 63.4
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 2.2e-39 166.0 142 63.4
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 2.2e-39 166.0 141 63.1
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 2.9e-39 165.6 141 64.5
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 2.9e-39 165.6 143 62.2
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 2.9e-39 165.6 140 65.0
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 5.0e-39 164.9 142 65.5
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 6.5e-39 164.5 175 54.3
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 6.5e-39 164.5 143 62.2
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 6.5e-39 164.5 145 60.0
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 6.5e-39 164.5 140 62.9
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 8.5e-39 164.1 149 63.8
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 1.1e-38 163.7 138 62.3
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 1.1e-38 163.7 145 63.4
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 1.1e-38 163.7 143 56.6
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 1.4e-38 163.3 141 57.4
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 1.9e-38 162.9 145 59.3
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 1.9e-38 162.9 142 62.0
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 2.5e-38 162.5 140 62.9
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 3.2e-38 162.2 144 61.8
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 5.5e-38 161.4 139 61.2
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 9.3e-38 160.6 131 63.4
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 9.3e-38 160.6 144 59.7
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 1.6e-37 159.8 141 60.3
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 2.7e-37 159.1 144 60.4
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 6.1e-37 157.9 140 64.3
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 1.3e-36 156.8 140 61.4
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 1.8e-36 156.4 144 59.7
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 3.0e-36 155.6 124 65.3
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 3.3e-35 152.1 125 67.2
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 4.3e-35 151.8 148 57.4
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 1.3e-34 150.2 141 57.4
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 1.3e-34 150.2 144 59.0
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 2.2e-34 149.4 140 59.3
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 6.3e-34 147.9 141 57.4
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 1.1e-33 147.1 135 60.0
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 1.4e-33 146.7 140 57.9
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 1.4e-33 146.7 140 57.9
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 1.8e-33 146.4 140 54.3
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 2.0e-32 142.9 128 62.5
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 2.0e-32 142.9 128 62.5
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 2.0e-32 142.9 140 53.6
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 4.5e-32 141.7 147 58.5
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 7.7e-32 141.0 145 57.9
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 1.7e-31 139.8 130 62.3
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 2.2e-31 139.4 138 60.1
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 8.5e-31 137.5 91 78.0
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 8.5e-31 137.5 127 59.8
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 2.1e-29 132.9 123 54.5
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 2.3e-28 129.4 114 64.9
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 2.3e-28 129.4 146 54.8
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 8.8e-28 127.5 126 61.1
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 1.1e-27 127.1 127 56.7
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 2.0e-27 126.3 143 51.7
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 7.4e-27 124.4 155 47.7
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 7.4e-27 124.4 127 55.9
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 1.1e-25 120.6 125 56.8
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 1.1e-25 120.6 123 53.7
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 2.4e-25 119.4 136 48.5
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 3.1e-25 119.0 126 50.0
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 6.9e-25 117.9 126 54.0
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 3.8e-23 112.1 122 54.1
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 8.5e-23 110.9 89 68.5
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 2.7e-21 105.9 137 46.0
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 3.9e-20 102.1 136 44.9
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 2.6e-19 99.4 133 44.4
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 4.4e-19 98.6 99 59.6
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 7.0e-17 91.3 141 44.0
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 3.5e-16 89.0 103 56.3
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 3.8e-15 85.5 103 54.4
PSO210G6050 Papaver somniferum HOM05D000045 ORTHO05D000067 2.1e-13 79.7 88 52.3
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 1.0e-12 77.4 103 42.7
Zm00001eb019850 Zea mays HOM05D005924 ORTHO05D007290 2.7e-08 62.8 98 37.8
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea HOM05D005924 ORTHO05D007290 1.0e-07 60.8 53 52.8
C09p49910 Brassica napus HOM05D005924 ORTHO05D007290 7.2e-06 54.7 43 62.8


User provided reference genes

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