Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049288.1 Olea europaea HOM05D018463 ORTHO05D000038 2.1e-100 369.0 187 100.0
Oeu064519.1 Olea europaea HOM05D000058 ORTHO05D000077 5.2e-22 108.6 74 75.7
Oeu001523.1 Olea europaea HOM05D018463 ORTHO05D292668 6.0e-18 95.1 100 57.0
Oeu013619.1 Olea europaea HOM05D018463 ORTHO05D000038 4.0e-14 82.4 60 55.0
Oeu040117.1 Olea europaea HOM05D000082 ORTHO05D000038 2.0e-13 80.1 60 63.3
Oeu049487.1 Olea europaea HOM05D018463 ORTHO05D289825 1.1e-11 74.3 137 48.9
Oeu004497.1 Olea europaea HOM05D018463 ORTHO05D288823 2.1e-10 70.1 137 47.4
Oeu040116.1 Olea europaea HOM05D000082 ORTHO05D000038 3.5e-10 69.3 60 58.3
Oeu020603.1 Olea europaea HOM05D018463 ORTHO05D000063 4.3e-08 62.4 135 43.0
AUR62017719 Chenopodium quinoa HOM05D000187 ORTHO05D000926 7.3e-08 61.6 58 43.1
Oeu003258.1 Olea europaea HOM05D000082 ORTHO05D000038 9.6e-08 61.2 60 43.3
Oeu003256.1 Olea europaea HOM05D000082 ORTHO05D000038 1.2e-07 60.8 60 43.3
Oeu045311.1 Olea europaea HOM05D000082 ORTHO05D000038 1.2e-07 60.8 60 43.3
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 1.2e-07 60.8 62 50.0
Glyma.02G108300 Glycine max HOM05D000082 ORTHO05D000038 2.1e-07 60.1 58 48.3
Nn4g24590 Nelumbo nucifera HOM05D000082 ORTHO05D000038 2.1e-07 60.1 60 46.7
Nn4g24591 Nelumbo nucifera HOM05D000082 ORTHO05D000038 2.1e-07 60.1 60 46.7
Glyma.01G048700 Glycine max HOM05D000082 ORTHO05D000038 2.8e-07 59.7 58 48.3
CARHR106320 Cardamine hirsuta HOM05D000082 ORTHO05D000038 4.7e-07 58.9 58 43.1
Migut.L00894 Erythranthe guttata HOM05D000082 ORTHO05D000038 4.7e-07 58.9 66 40.9
Rhsim06G0230300 Rhododendron simsii HOM05D000082 ORTHO05D000038 6.2e-07 58.5 59 42.4
RhsimUnG0156200 Rhododendron simsii HOM05D000082 ORTHO05D000038 6.2e-07 58.5 59 42.4
Eucgr.B00656 Eucalyptus grandis HOM05D000082 ORTHO05D000038 8.1e-07 58.2 58 44.8
AUR62032960 Chenopodium quinoa HOM05D000187 ORTHO05D000926 1.1e-06 57.8 59 42.4
FAN05G0156 Fragaria x ananassa HOM05D000082 ORTHO05D000038 1.1e-06 57.8 60 48.3
CSS0008729 Camellia sinensis var. sinensis HOM05D014769 ORTHO05D015780 1.4e-06 57.4 47 44.7
CANSAT64G0227 Cannabis sativa HOM05D000082 ORTHO05D000038 1.4e-06 57.4 58 41.4
FAN20G2391 Fragaria x ananassa HOM05D029497 ORTHO05D000038 1.4e-06 57.4 64 43.8
Nn2g15190 Nelumbo nucifera HOM05D000082 ORTHO05D000038 1.4e-06 57.4 62 41.9
TPR.G35303 Trifolium pratense HOM05D000082 ORTHO05D000038 1.4e-06 57.4 62 50.0
Aqoxy3G03344 Aquilegia oxysepala HOM05D000082 ORTHO05D000038 1.8e-06 57.0 61 44.3
arahy.Tifrunner.gnm1.ann1.D3PFJ3 Arachis hypogaea HOM05D000082 ORTHO05D000038 1.8e-06 57.0 63 44.4
Gohir.A08G000121 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.8e-06 57.0 60 46.7
Gohir.A08G001150 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.8e-06 57.0 60 46.7
Gohir.D08G009750 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.8e-06 57.0 60 46.7
Gorai.004G002900 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.8e-06 57.0 60 46.7
PSO782G0758 Papaver somniferum HOM05D000082 ORTHO05D000038 1.8e-06 57.0 60 43.3
RcHm_v2.0_Chr6g0295911 Rosa chinensis HOM05D000082 ORTHO05D000038 1.8e-06 57.0 59 45.8
Duzib084G1253 Durio zibethinus HOM05D000082 ORTHO05D000038 2.4e-06 56.6 61 37.7
FvH4_6g01430 Fragaria vesca HOM05D000082 ORTHO05D000038 2.4e-06 56.6 60 46.7
FAN14G0434 Fragaria x ananassa HOM05D000082 ORTHO05D000038 2.4e-06 56.6 60 46.7
Lalb_Chr04g0255991 Lupinus albus HOM05D000082 ORTHO05D000038 2.4e-06 56.6 70 41.4
CSS0032511 Camellia sinensis var. sinensis HOM05D014769 ORTHO05D015780 3.1e-06 56.2 47 44.7
Gohir.A07G199450 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.1e-06 56.2 53 43.4
Gohir.D07G205866 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.1e-06 56.2 53 43.4
Gorai.001G232000 Gossypium raimondii HOM05D000082 ORTHO05D000038 3.1e-06 56.2 53 43.4
Gorai.001G232200 Gossypium raimondii HOM05D000082 ORTHO05D000038 3.1e-06 56.2 53 43.4
Psat6g233560 Pisum sativum HOM05D000082 ORTHO05D000038 3.1e-06 56.2 58 37.9
QL04p075824 Quercus lobata HOM05D000082 ORTHO05D000038 3.1e-06 56.2 58 39.7
C04p45060 Brassica napus HOM05D000082 ORTHO05D000038 4.0e-06 55.8 58 41.4
BolC4t26084H Brassica oleracea HOM05D000082 ORTHO05D000038 4.0e-06 55.8 58 41.4
DCAR_021743 Daucus carota HOM05D000082 ORTHO05D000038 4.0e-06 55.8 61 37.7
DCAR_021787 Daucus carota HOM05D000082 ORTHO05D000038 4.0e-06 55.8 61 37.7
Eucgr.B00657 Eucalyptus grandis HOM05D000082 ORTHO05D000038 4.0e-06 55.8 58 43.1
Thhalv10025714m.g Eutrema salsugineum HOM05D000082 ORTHO05D000038 4.0e-06 55.8 58 41.4
Prupe.1G495200 Prunus persica HOM05D000082 ORTHO05D000038 4.0e-06 55.8 59 44.1
RcHm_v2.0_Chr3g0449061 Rosa chinensis HOM05D000082 ORTHO05D000038 4.0e-06 55.8 59 45.8
CSS0044666 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D000038 5.2e-06 55.5 45 46.7
FvH4_2g27040 Fragaria vesca HOM05D000082 ORTHO05D000038 5.2e-06 55.5 59 44.1
FAN24G0679 Fragaria x ananassa HOM05D029497 ORTHO05D000038 5.2e-06 55.5 59 44.1
Gohir.A13G075300 Gossypium hirsutum HOM05D000082 ORTHO05D000038 5.2e-06 55.5 60 45.0
Gohir.D13G075500 Gossypium hirsutum HOM05D000082 ORTHO05D000038 5.2e-06 55.5 60 45.0
Nn1g00576 Nelumbo nucifera HOM05D000082 ORTHO05D000038 5.2e-06 55.5 60 45.0
Oeu059509.1 Olea europaea HOM05D018463 ORTHO05D290469 5.2e-06 55.5 46 58.7
SGA_v2.0_scaffold63G21650 Striga asiatica HOM05D000082 ORTHO05D000038 5.2e-06 55.5 60 45.0
vmacro20398 Vaccinium macrocarpon HOM05D000082 ORTHO05D000038 5.2e-06 55.5 58 34.5
Gorai.004G005700 Gossypium raimondii HOM05D000082 ORTHO05D000038 6.8e-06 55.1 46 50.0
Lsat_1_v5_gn_3_71421 Lactuca sativa HOM05D015245 ORTHO05D000230 6.8e-06 55.1 39 56.4
Lsat_1_v5_gn_3_71641 Lactuca sativa HOM05D015245 ORTHO05D000230 6.8e-06 55.1 39 56.4
Lsat_1_v5_gn_3_71661 Lactuca sativa HOM05D015245 ORTHO05D000230 6.8e-06 55.1 39 56.4
Lsat_1_v5_gn_3_71741 Lactuca sativa HOM05D015245 ORTHO05D000230 6.8e-06 55.1 39 56.4
Lsat_1_v5_gn_3_71801 Lactuca sativa HOM05D015245 ORTHO05D000230 6.8e-06 55.1 39 56.4
Psat5g087240 Pisum sativum HOM05D000082 ORTHO05D000038 6.8e-06 55.1 59 44.1
Psat7g045160 Pisum sativum HOM05D000082 ORTHO05D001639 6.8e-06 55.1 62 41.9
Ah.01g012510 Amaranthus hybridus HOM05D000187 ORTHO05D000926 8.9e-06 54.7 59 40.7
Aqoxy4G00507 Aquilegia oxysepala HOM05D000082 ORTHO05D000038 8.9e-06 54.7 60 41.7
AT1G60360 Arabidopsis thaliana HOM05D000082 ORTHO05D000038 8.9e-06 54.7 58 41.4
Cfa002019 Carpinus fangiana HOM05D002312 ORTHO05D000038 8.9e-06 54.7 59 37.3
CDE07G0666 Ceratophyllum demersum HOM05D000082 ORTHO05D000038 8.9e-06 54.7 58 41.4
Gorai.006G016300 Gossypium raimondii HOM05D000082 ORTHO05D000038 8.9e-06 54.7 60 41.7
Gorai.013G086200 Gossypium raimondii HOM05D000082 ORTHO05D000038 8.9e-06 54.7 60 45.0
MBI03_g13824_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D010224 8.9e-06 54.7 60 36.7
Sabra19G0097000 Salix brachista HOM05D000082 ORTHO05D000038 8.9e-06 54.7 62 38.7


User provided reference genes

Program Settings