Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 1.4e-72 276.2 139 100.0
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 7.5e-58 227.3 139 80.6
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 1.2e-55 219.9 139 77.7
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.6e-47 193.0 136 68.4
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 1.3e-46 189.9 137 68.6
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 1.7e-46 189.5 137 65.7
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 3.9e-46 188.3 138 66.7
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 6.6e-46 187.6 133 69.2
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 2.8e-44 182.2 135 63.0
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 6.2e-44 181.0 136 64.7
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 8.0e-44 180.6 136 64.7
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 1.8e-43 179.5 138 66.7
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 3.1e-43 178.7 130 68.5
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 3.1e-43 178.7 130 68.5
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 4.0e-43 178.3 136 63.2
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 6.8e-43 177.6 136 63.2
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 6.8e-43 177.6 136 63.2
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 8.9e-43 177.2 136 62.5
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 9.8e-42 173.7 137 59.9
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.3e-41 173.3 136 60.3
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 2.2e-41 172.6 137 59.9
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 2.9e-41 172.2 132 63.6
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 2.9e-41 172.2 137 60.6
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 3.7e-41 171.8 138 60.1
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 4.9e-41 171.4 137 59.1
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 4.9e-41 171.4 136 60.3
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 8.3e-41 170.6 137 56.9
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 1.1e-40 170.2 136 60.3
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 1.4e-40 169.9 137 57.7
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 3.2e-40 168.7 134 63.4
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 5.4e-40 167.9 136 60.3
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 7.0e-40 167.5 137 58.4
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 9.2e-40 167.2 137 59.9
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 9.2e-40 167.2 133 60.9
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 1.6e-39 166.4 137 56.9
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 1.6e-39 166.4 137 56.9
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 2.0e-39 166.0 136 55.1
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 2.0e-39 166.0 134 60.4
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 2.7e-39 165.6 135 60.7
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 4.6e-39 164.9 137 57.7
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 6.0e-39 164.5 139 58.3
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 3.9e-38 161.8 114 68.4
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 3.9e-38 161.8 136 59.6
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 5.0e-38 161.4 137 55.5
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 1.1e-37 160.2 136 55.1
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 1.9e-37 159.5 130 58.5
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 5.6e-37 157.9 129 62.8
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 9.5e-37 157.1 136 55.1
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.1e-36 156.0 137 55.5
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.8e-36 155.6 136 53.7
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 3.6e-36 155.2 136 53.7
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 4.7e-36 154.8 137 54.0
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 6.2e-36 154.5 138 53.6
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 6.2e-36 154.5 137 54.0
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 6.2e-36 154.5 138 54.3
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 8.1e-36 154.1 135 55.6
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 1.1e-35 153.7 132 56.8
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 1.4e-35 153.3 137 53.3
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 1.8e-35 152.9 136 53.7
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 2.3e-35 152.5 135 55.6
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 2.3e-35 152.5 137 54.7
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 2.3e-35 152.5 137 54.0
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 3.1e-35 152.1 137 54.0
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 3.1e-35 152.1 133 57.9
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 4.0e-35 151.8 135 52.6
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 5.2e-35 151.4 137 52.6
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 5.2e-35 151.4 135 54.1
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 5.2e-35 151.4 136 52.9
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 6.8e-35 151.0 106 70.8
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 6.8e-35 151.0 137 51.8
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 6.8e-35 151.0 137 51.8
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 8.9e-35 150.6 138 51.4
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 1.5e-34 149.8 137 51.8
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 2.6e-34 149.1 132 53.8
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 2.6e-34 149.1 137 51.1
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 2.6e-34 149.1 136 56.6
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 5.8e-34 147.9 137 52.6
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 5.8e-34 147.9 133 52.6
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 5.8e-34 147.9 132 56.1
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 7.5e-34 147.5 136 52.2
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 7.5e-34 147.5 137 52.6
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 7.5e-34 147.5 135 53.3
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 7.5e-34 147.5 133 52.6
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 1.3e-33 146.7 137 52.6
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 1.3e-33 146.7 137 50.4
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 1.3e-33 146.7 141 53.9
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 1.3e-33 146.7 136 52.2
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 1.7e-33 146.4 137 53.3
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 2.9e-33 145.6 137 50.4
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.9e-33 145.6 136 50.7
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 3.7e-33 145.2 137 52.6
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 3.7e-33 145.2 137 52.6
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 4.9e-33 144.8 133 51.1
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 8.3e-33 144.1 131 51.1
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 8.3e-33 144.1 138 49.3
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 1.1e-32 143.7 138 51.4
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.1e-32 143.7 137 51.8
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.4e-32 143.3 137 48.9
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 3.2e-32 142.1 135 50.4
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 4.1e-32 141.7 106 67.0
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 2.1e-31 139.4 127 52.8
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 2.7e-31 139.0 125 55.2
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 4.6e-31 138.3 133 50.4
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 7.8e-31 137.5 133 51.9
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 5.1e-30 134.8 155 47.7
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 4.0e-27 125.2 91 63.7
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 1.5e-26 123.2 90 63.3
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 2.0e-26 122.9 90 62.2
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 1.3e-25 120.2 105 61.0
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.1e-24 117.1 137 43.8
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 3.2e-24 115.5 128 44.5
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 5.4e-24 114.8 134 45.5
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 1.7e-22 109.8 146 43.2
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 3.0e-22 109.0 133 42.9
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 1.6e-20 103.2 131 42.0
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.1e-19 100.5 78 64.1
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 1.1e-19 100.5 119 42.0
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 3.9e-14 82.0 99 44.4
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 1.1e-13 80.5 134 33.6
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 1.9e-13 79.7 65 58.5
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 5.6e-13 78.2 93 45.2
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 2.1e-12 76.3 132 34.1
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 8.1e-12 74.3 65 55.4
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 1.8e-11 73.2 70 51.4
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 2.4e-11 72.8 68 54.4
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 2.6e-10 69.3 64 48.4
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 4.2e-08 62.0 64 50.0
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 9.3e-08 60.8 76 42.1
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.6e-07 60.1 53 54.7


User provided reference genes

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