Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 1.0e-154 550.1 284 100.0
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.5e-89 333.6 278 68.3
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 3.6e-83 312.4 284 63.0
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 8.1e-83 311.2 290 62.4
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 2.3e-82 309.7 306 63.1
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 6.8e-82 308.1 292 62.7
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 8.9e-82 307.8 293 61.8
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 1.2e-81 307.4 282 60.6
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 9.8e-81 304.3 302 63.2
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.3e-80 303.9 293 64.2
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 4.9e-80 302.0 280 63.9
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 2.4e-79 299.7 302 60.6
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.2e-78 297.4 278 61.9
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.3e-77 293.1 306 58.8
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 6.6e-77 291.6 285 60.4
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 1.5e-76 290.4 293 60.8
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 4.3e-76 288.9 295 59.7
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 5.6e-76 288.5 284 60.2
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 1.2e-75 287.3 292 58.9
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 2.1e-75 286.6 288 61.5
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 4.7e-75 285.4 286 61.2
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.1e-74 284.3 286 61.2
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.4e-74 283.9 286 61.2
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 1.4e-74 283.9 283 64.7
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 1.2e-73 280.8 290 59.0
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 2.0e-73 280.0 284 59.9
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 1.4e-71 273.9 292 57.5
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.9e-71 273.5 284 59.5
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 3.2e-71 272.7 286 57.0
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 4.1e-71 272.3 294 57.8
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 7.1e-71 271.6 288 58.3
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 2.1e-70 270.0 221 68.3
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 2.3e-69 266.5 295 55.3
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 2.3e-69 266.5 274 59.5
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.1e-68 264.2 309 53.7
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.5e-68 263.8 277 56.3
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 1.5e-68 263.8 276 58.7
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 1.9e-68 263.5 288 54.5
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 1.2e-67 260.8 288 57.3
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 1.2e-67 260.8 274 56.6
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.6e-67 260.4 294 54.4
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 1.6e-67 260.4 291 54.6
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 8.1e-67 258.1 276 60.1
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 2.4e-66 256.5 278 54.7
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 2.4e-66 256.5 276 55.1
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 3.1e-66 256.1 277 56.0
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 6.8e-66 255.0 291 58.1
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 6.8e-66 255.0 271 55.0
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.2e-65 254.2 283 55.5
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 1.5e-65 253.8 275 61.5
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 2.6e-65 253.1 290 58.3
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 5.8e-65 251.9 282 55.7
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 7.6e-65 251.5 311 52.4
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 7.6e-65 251.5 276 57.2
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 2.2e-64 250.0 283 53.4
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 2.9e-64 249.6 313 50.5
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 3.8e-64 249.2 310 50.3
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 8.4e-64 248.1 286 51.4
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 8.4e-64 248.1 298 53.4
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 8.4e-64 248.1 319 50.5
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.9e-63 246.9 295 54.2
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 2.4e-63 246.5 294 53.7
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 3.2e-63 246.1 303 53.5
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 4.2e-63 245.7 286 52.4
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 7.1e-63 245.0 297 53.9
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.6e-62 243.8 283 51.9
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 4.6e-62 242.3 290 51.7
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 4.6e-62 242.3 304 52.0
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.3e-61 240.0 293 51.2
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 2.3e-61 240.0 284 51.4
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.3e-61 240.0 283 53.0
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 3.0e-61 239.6 268 54.9
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 6.6e-61 238.4 275 53.1
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 6.6e-61 238.4 275 53.1
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 8.7e-61 238.0 283 53.0
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 2.5e-60 236.5 280 54.6
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.3e-60 236.1 283 53.0
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 5.6e-60 235.3 297 52.2
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 9.6e-60 234.6 283 52.7
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 3.6e-59 232.6 293 52.2
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 3.6e-59 232.6 129 86.0
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 8.1e-59 231.5 333 46.2
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 3.4e-57 226.1 338 46.2
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 1.6e-54 217.2 278 52.5
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 3.9e-53 212.6 349 43.3
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.1e-52 211.1 380 41.6
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 3.3e-52 209.5 312 48.4
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 4.2e-47 192.6 279 44.4
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 1.2e-46 191.0 100 90.0
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.0e-45 188.0 110 80.0
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.3e-45 187.6 100 85.0
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 1.3e-45 187.6 108 83.3
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 5.1e-45 185.7 272 45.2
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.5e-44 183.3 98 88.8
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 5.3e-42 175.6 252 49.2
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 2.0e-41 173.7 135 63.0
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 2.0e-41 173.7 100 81.0
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 7.6e-41 171.8 287 49.5
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 3.2e-39 166.4 127 59.8
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 3.0e-37 159.8 127 67.7
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 5.1e-37 159.1 99 77.8
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 3.3e-36 156.4 137 55.5
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 1.3e-35 154.5 81 86.4
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 2.0e-33 147.1 218 52.8
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 5.9e-33 145.6 115 58.3
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.6e-25 120.2 191 48.7
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 7.7e-25 118.6 218 44.0
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 2.8e-19 100.1 200 43.5
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 1.4e-18 97.8 245 36.3
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.2e-17 94.7 205 40.0
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 1.6e-14 84.3 82 57.3
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 3.9e-13 79.7 41 87.8
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 7.4e-12 75.5 201 37.3
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 8.2e-11 72.0 43 74.4
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 8.2e-11 72.0 43 74.4
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 8.2e-11 72.0 43 74.4
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 8.2e-11 72.0 43 74.4
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 7.0e-10 68.9 44 70.5
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.2e-06 58.2 195 33.3
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 6.1e-06 55.8 199 35.2


User provided reference genes

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