Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 3.8e-171 604.7 304 100.0
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 9.9e-71 271.2 313 50.2
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 2.5e-58 229.9 311 45.0
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 2.5e-58 229.9 282 50.0
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 2.5e-58 229.9 296 47.6
Oeu056719.1 Olea europaea HOM05D006585 ORTHO05D007798 1.1e-56 224.6 232 57.3
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 1.5e-55 220.7 312 44.9
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 1.3e-54 217.6 284 46.1
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 2.9e-54 216.5 311 41.8
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 3.8e-54 216.1 313 43.8
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 1.1e-53 214.5 295 48.5
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 3.0e-51 206.5 354 41.5
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 3.9e-51 206.1 311 41.5
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 3.9e-51 206.1 321 41.7
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 5.1e-51 205.7 287 44.3
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 1.1e-50 204.5 310 44.8
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 1.9e-50 203.8 292 44.5
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 7.4e-50 201.8 306 42.5
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 2.1e-49 200.3 310 41.6
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 6.2e-49 198.7 285 44.6
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 6.2e-49 198.7 286 43.4
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 2.4e-48 196.8 298 42.3
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 9.0e-48 194.9 289 41.9
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 9.0e-48 194.9 318 40.9
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 1.2e-47 194.5 316 41.8
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 1.2e-47 194.5 336 39.9
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 1.0e-46 191.4 294 43.2
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.3e-46 191.0 293 44.4
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 2.9e-46 189.9 283 41.7
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 1.4e-45 187.6 311 40.8
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 1.9e-45 187.2 317 40.1
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 4.2e-45 186.0 313 39.6
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 5.5e-45 185.7 310 40.0
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 7.1e-45 185.3 338 38.2
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 7.1e-45 185.3 336 37.8
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 2.1e-44 183.7 283 42.8
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 2.1e-44 183.7 290 41.7
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 2.7e-44 183.3 322 38.5
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 3.5e-44 183.0 333 41.7
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 6.0e-44 182.2 316 38.3
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 6.0e-44 182.2 269 43.9
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 2.3e-43 180.3 307 38.8
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 6.7e-43 178.7 286 40.9
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 1.9e-42 177.2 318 38.4
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 9.6e-42 174.9 286 41.6
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 1.1e-40 171.4 316 38.3
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 2.0e-39 167.2 358 36.6
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 5.8e-39 165.6 278 40.6
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 7.6e-39 165.2 348 36.5
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 3.8e-38 162.9 290 37.9
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 1.1e-37 161.4 355 33.8
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 1.4e-37 161.0 293 37.9
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 1.9e-37 160.6 284 37.3
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 2.5e-37 160.2 284 39.1
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 5.5e-37 159.1 327 33.9
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 7.2e-37 158.7 342 33.0
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 9.3e-37 158.3 271 40.2
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 3.5e-36 156.4 291 38.8
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 3.5e-36 156.4 309 36.6
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 3.5e-36 156.4 309 36.6
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 6.1e-36 155.6 269 40.1
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 7.9e-36 155.2 307 35.2
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 6.7e-35 152.1 291 37.8
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 8.7e-35 151.8 342 33.0
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 9.7e-34 148.3 359 32.0
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 2.2e-33 147.1 284 38.4
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 8.2e-33 145.2 318 34.3
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 1.1e-32 144.8 289 37.0
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 1.1e-32 144.8 144 56.9
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 4.1e-32 142.9 349 32.7
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 2.0e-31 140.6 247 39.7
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 3.4e-31 139.8 287 36.2
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 5.9e-31 139.0 188 41.5
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 1.7e-30 137.5 367 31.1
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.1e-29 134.8 260 37.3
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 5.5e-29 132.5 340 32.1
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 2.7e-28 130.2 293 34.5
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 7.9e-28 128.6 178 41.6
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 1.8e-27 127.5 292 33.9
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 3.0e-27 126.7 212 39.2
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 5.1e-27 125.9 168 44.6
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 3.3e-26 123.2 345 28.4
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 4.8e-25 119.4 362 30.4
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 6.3e-25 119.0 134 50.0
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 2.4e-24 117.1 142 50.0
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 1.5e-23 114.4 277 32.1
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 3.4e-23 113.2 288 31.2
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 1.7e-22 110.9 139 48.9
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 1.1e-21 108.2 172 42.4
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 1.1e-21 108.2 430 29.1
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 3.2e-21 106.7 355 30.4
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 5.1e-19 99.4 234 32.1
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 1.5e-18 97.8 163 39.9
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 4.4e-18 96.3 91 52.7
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 5.7e-18 95.9 109 50.5
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 3.7e-17 93.2 226 32.7
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 1.1e-16 91.7 141 41.8
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 2.4e-16 90.5 113 46.0
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 3.1e-16 90.1 156 36.5
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 7.0e-16 89.0 155 36.1
SalBow8G2270 Salvia bowleyana HOM05D006585 ORTHO05D007798 2.0e-15 87.4 197 35.0
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 2.6e-15 87.0 169 34.9
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 5.9e-15 85.9 227 33.0
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 5.9e-15 85.9 323 26.9
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 4.2e-13 79.7 289 29.8
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 8.8e-11 72.0 109 37.6
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 7.5e-10 68.9 54 55.6
SGA_v2.0_scaffold34G13586 Striga asiatica HOM05D006585 ORTHO05D007798 7.5e-10 68.9 96 38.5
SGA_v2.0_scaffold779G53588 Striga asiatica HOM05D006585 ORTHO05D007798 1.7e-09 67.8 96 38.5
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 1.4e-08 64.7 134 31.3
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 7.0e-08 62.4 140 30.7
Atru.chr11.2134 Acer truncatum HOM05D006585 ORTHO05D007798 1.6e-07 61.2 285 27.7
Atru.chr11.2118 Acer truncatum HOM05D006585 ORTHO05D007798 2.0e-07 60.8 285 27.0
AUR62008166 Chenopodium quinoa HOM05D000060 ORTHO05D000082 1.3e-06 58.2 73 45.2
DCAR_005656 Daucus carota HOM05D006585 ORTHO05D007798 2.2e-06 57.4 75 44.0


User provided reference genes

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