Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049048.2 Olea europaea HOM05D003029 ORTHO05D003413 2.0e-223 779.2 539 100.0
MSTRG.9800 Avicennia marina HOM05D003029 ORTHO05D003413 6.9e-67 259.2 554 51.6
MSTRG.4243 Avicennia marina HOM05D003029 ORTHO05D003413 2.6e-66 257.3 573 42.8
SalBow3G0925 Salvia bowleyana HOM05D003029 ORTHO05D003413 6.7e-62 242.7 465 46.2
Oeu043441.1 Olea europaea HOM05D003029 ORTHO05D003413 1.1e-59 235.3 492 45.5
SGA_v2.0_scaffold270G46323 Striga asiatica HOM05D003029 ORTHO05D003413 1.2e-58 231.9 563 43.9
Cc03_g08440 Coffea canephora HOM05D003029 ORTHO05D003413 3.4e-58 230.3 462 42.9
CSS0049755 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 2.2e-52 211.1 560 46.6
SalBow8G5155 Salvia bowleyana HOM05D003029 ORTHO05D003413 4.8e-52 209.9 465 41.9
Migut.G00757 Erythranthe guttata HOM05D003029 ORTHO05D003413 9.0e-51 205.7 583 44.8
GSVIVG01021020001 Vitis vinifera HOM05D003029 ORTHO05D003413 9.4e-48 195.7 560 44.3
Nitab4.5_0006920g0010 Nicotiana tabacum HOM05D003029 ORTHO05D003413 1.6e-47 194.9 581 46.3
Thecc.04G195700 Theobroma cacao HOM05D003029 ORTHO05D003413 2.1e-47 194.5 571 44.7
CiPaw.01G117300 Carya illinoinensis HOM05D003029 ORTHO05D003413 1.4e-46 191.8 549 42.4
Nitab4.5_0002260g0050 Nicotiana tabacum HOM05D003029 ORTHO05D003413 1.5e-45 188.3 588 44.7
Actinidia11454 Actinidia chinensis HOM05D003029 ORTHO05D003413 3.3e-45 187.2 596 43.5
Duzib268G0331 Durio zibethinus HOM05D003029 ORTHO05D003413 1.3e-44 185.3 572 42.8
Nitab4.5_0000676g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 3.7e-44 183.7 585 44.6
Actinidia21255 Actinidia chinensis HOM05D003029 ORTHO05D003413 4.1e-43 180.3 578 42.0
Duzib212G0885 Durio zibethinus HOM05D003029 ORTHO05D003413 4.1e-43 180.3 569 42.5
Atru.chr4.1590 Acer truncatum HOM05D003029 ORTHO05D003413 7.7e-42 176.0 586 42.3
Peaxi162Scf00423g00411 Petunia axillaris HOM05D003029 ORTHO05D003413 7.7e-42 176.0 613 40.6
Potri.017G058500 Populus trichocarpa HOM05D003029 ORTHO05D003413 7.7e-42 176.0 577 40.9
Actinidia35843 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.3e-41 175.3 579 42.8
MD04G1017000 Malus domestica HOM05D003029 ORTHO05D003413 3.8e-41 173.7 579 39.9
Sabra17G0052100 Salix brachista HOM05D003029 ORTHO05D003413 8.5e-41 172.6 599 37.9
Duzib151G1197 Durio zibethinus HOM05D003029 ORTHO05D003413 1.4e-40 171.8 569 41.5
Oeu056423.1 Olea europaea HOM05D003029 ORTHO05D003413 1.4e-40 171.8 437 33.4
Manes.03G144600 Manihot esculenta HOM05D003029 ORTHO05D003413 2.5e-40 171.0 568 41.9
COL.COLO4_20221 Corchorus olitorius HOM05D003029 ORTHO05D003413 3.2e-40 170.6 482 38.2
Cfa014958 Carpinus fangiana HOM05D003029 ORTHO05D003413 1.2e-39 168.7 554 41.3
Nitab4.5_0000850g0180 Nicotiana tabacum HOM05D003029 ORTHO05D003413 3.6e-39 167.2 578 43.1
MD04G1017100 Malus domestica HOM05D003029 ORTHO05D003413 4.7e-39 166.8 577 38.5
Prupe.1G164200 Prunus persica HOM05D003029 ORTHO05D003413 7.9e-39 166.0 599 38.6
Glyma.18G001900 Glycine max HOM05D003029 ORTHO05D003413 3.9e-38 163.7 562 38.4
Gorai.005G028200 Gossypium raimondii HOM05D003029 ORTHO05D003413 3.9e-38 163.7 571 42.4
Haze_11649 Corylus avellana HOM05D003029 ORTHO05D003413 5.1e-38 163.3 462 35.5
Actinidia21254 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.1e-37 162.2 491 38.9
Sabra17G0052200 Salix brachista HOM05D003029 ORTHO05D003413 3.3e-37 160.6 469 39.2
RcHm_v2.0_Chr4g0413691 Rosa chinensis HOM05D003029 ORTHO05D003413 1.3e-36 158.7 576 39.8
Gohir.D02G022800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 2.2e-36 157.9 574 41.6
Dinv14526 Davidia involucrata HOM05D003029 ORTHO05D003413 3.1e-35 154.1 587 39.2
TAR362G1056 Trochodendron aralioides HOM05D003029 ORTHO05D003413 3.1e-35 154.1 550 36.9
TAR636G0249 Trochodendron aralioides HOM05D003029 ORTHO05D003413 1.5e-34 151.8 432 40.3
Rhsim02G0061600 Rhododendron simsii HOM05D003029 ORTHO05D003413 3.5e-34 150.6 471 39.9
Gohir.A02G019500 Gossypium hirsutum HOM05D003029 ORTHO05D003413 2.2e-33 147.9 572 40.0
MD13G1282000 Malus domestica HOM05D003029 ORTHO05D003413 5.0e-33 146.7 573 37.9
CAN.G767.12 Capsicum annuum HOM05D003029 ORTHO05D003413 8.5e-33 146.0 611 40.1
QL06p026140 Quercus lobata HOM05D003029 ORTHO05D003413 1.1e-32 145.6 474 42.0
Sabra16G0202400 Salix brachista HOM05D003029 ORTHO05D003413 1.1e-32 145.6 640 35.9
TAR365G0314 Trochodendron aralioides HOM05D003029 ORTHO05D003413 1.1e-32 145.6 401 40.6
CiPaw.02G064700 Carya illinoinensis HOM05D003029 ORTHO05D003413 1.5e-32 145.2 423 40.0
Glyma.11G255200 Glycine max HOM05D003029 ORTHO05D003413 3.2e-32 144.1 567 40.4
Sabra16G0202200 Salix brachista HOM05D003029 ORTHO05D003413 3.2e-32 144.1 471 36.5
Gorai.006G223500 Gossypium raimondii HOM05D003029 ORTHO05D003413 8.0e-31 139.4 573 38.9
Gohir.D09G199800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 1.0e-30 139.0 578 39.6
Lalb_Chr13g0294851 Lupinus albus HOM05D003029 ORTHO05D003413 2.3e-30 137.9 584 40.4
DCAR_026643 Daucus carota HOM05D003029 ORTHO05D003413 4.0e-30 137.1 441 39.9
FAN22G0425 Fragaria x ananassa HOM05D003029 ORTHO05D003413 1.1e-29 135.6 383 39.7
Gohir.A10G127900 Gossypium hirsutum HOM05D003029 ORTHO05D003413 1.5e-29 135.2 571 38.7
TWI36G0576 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 2.0e-29 134.8 409 28.1
Eucgr.H00027 Eucalyptus grandis HOM05D003029 ORTHO05D003413 3.3e-29 134.0 585 31.8
Medtr8g081570 Medicago truncatula HOM05D003029 ORTHO05D003413 3.3e-29 134.0 590 38.5
CiPaw.14G040000 Carya illinoinensis HOM05D003029 ORTHO05D003413 5.7e-29 133.3 583 33.6
PSO017G1724 Papaver somniferum HOM05D003029 ORTHO05D003413 3.7e-28 130.6 587 38.0
Lalb_Chr07g0186821 Lupinus albus HOM05D003029 ORTHO05D003413 4.8e-28 130.2 587 40.5
Potri.017G058600 Populus trichocarpa HOM05D003029 ORTHO05D003413 6.3e-28 129.8 361 40.4
Haze_03354 Corylus avellana HOM05D003029 ORTHO05D003413 8.2e-28 129.4 434 40.3
FAN17G0226 Fragaria x ananassa HOM05D003029 ORTHO05D003413 8.2e-28 129.4 401 39.4
FAN12G1114 Fragaria x ananassa HOM05D003029 ORTHO05D003413 1.1e-27 129.0 410 38.0
Glyma.05G152400 Glycine max HOM05D003029 ORTHO05D003413 1.1e-27 129.0 590 39.3
Manes.12G049400 Manihot esculenta HOM05D003029 ORTHO05D003413 1.1e-27 129.0 423 38.3
FvH4_4g13340 Fragaria vesca HOM05D003029 ORTHO05D003413 2.4e-27 127.9 410 38.0
Lj4g0000581 Lotus japonicus HOM05D003029 ORTHO05D003413 3.1e-27 127.5 628 35.7
FAN07G2221 Fragaria x ananassa HOM05D003029 ORTHO05D003413 5.3e-27 126.7 648 36.3
PGSC0003DMG400015747 Solanum tuberosum HOM05D003029 ORTHO05D003413 5.3e-27 126.7 467 46.7
TWI75G0963 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 5.3e-27 126.7 551 33.0
CAN.G765.36 Capsicum annuum HOM05D003029 ORTHO05D003413 9.1e-27 125.9 636 40.7
Actinidia28994 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.2e-26 125.6 451 44.1
Nn3g20072 Nelumbo nucifera HOM05D003029 ORTHO05D003413 2.0e-26 124.8 561 39.8
Sed0025519 Sechium edule HOM05D003029 ORTHO05D003413 2.0e-26 124.8 564 39.5
unitig_8.g3407 Utricularia gibba HOM05D003029 ORTHO05D003413 2.0e-26 124.8 561 31.4
TPR.G11807 Trifolium pratense HOM05D003029 ORTHO05D003413 4.5e-26 123.6 610 39.8
Gorai.011G153200 Gossypium raimondii HOM05D003029 ORTHO05D003413 1.0e-25 122.5 579 40.4
Atru.chr6.1447 Acer truncatum HOM05D003029 ORTHO05D003413 2.9e-25 120.9 557 38.6
TWI36G1114 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 2.9e-25 120.9 552 29.0
MELO3C020427.2 Cucumis melo HOM05D003029 ORTHO05D003413 5.0e-25 120.2 566 38.9
Nn3g20075 Nelumbo nucifera HOM05D003029 ORTHO05D003413 5.0e-25 120.2 545 36.1
Phvul.003G050700 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 5.0e-25 120.2 583 38.9
Manes.13G051200 Manihot esculenta HOM05D003029 ORTHO05D003413 8.5e-25 119.4 430 34.4
Solyc05g053770.4 Solanum lycopersicum HOM05D003029 ORTHO05D003413 1.9e-24 118.2 465 45.2
VMungo0251G3135 Vigna mungo HOM05D003029 ORTHO05D003413 1.9e-24 118.2 586 33.4
Glyma.08G110100 Glycine max HOM05D003029 ORTHO05D003413 4.2e-24 117.1 594 38.0
Phvul.003G050800 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 4.2e-24 117.1 585 39.7
TWI18G0251 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 4.2e-24 117.1 550 28.7
unitig_22.g6828 Utricularia gibba HOM05D003029 ORTHO05D003413 5.5e-24 116.7 539 30.8
TAR633G2732 Trochodendron aralioides HOM05D003029 ORTHO05D003413 9.4e-24 115.9 432 44.2
VMungo0251G2529 Vigna mungo HOM05D003029 ORTHO05D003413 9.4e-24 115.9 481 34.7
Sopen05g032240 Solanum pennellii HOM05D003029 ORTHO05D003413 1.2e-23 115.5 467 45.8
ClCG06G007970 Citrullus lanatus HOM05D003029 ORTHO05D003413 1.6e-23 115.2 570 36.7
Hma1.2p1_0349F.1_g132190 Hydrangea macrophylla HOM05D003029 ORTHO05D003413 1.6e-23 115.2 489 39.9
Dinv27203 Davidia involucrata HOM05D003029 ORTHO05D003413 2.1e-23 114.8 361 49.3
PGSC0003DMG400004658 Solanum tuberosum HOM05D003029 ORTHO05D003413 8.0e-23 112.8 421 48.5
Gohir.D10G138100 Gossypium hirsutum HOM05D003029 ORTHO05D003413 1.0e-22 112.5 378 41.3
Rhsim09G0059700 Rhododendron simsii HOM05D003029 ORTHO05D003413 1.8e-22 111.7 628 33.1
GSVIVG01004954001 Vitis vinifera HOM05D003029 ORTHO05D003413 1.8e-22 111.7 209 35.9
Sc13g0000380 Simmondsia chinensis HOM05D003029 ORTHO05D003413 5.2e-22 110.2 571 34.0
Ca_17981_v3 Cicer arietinum L. HOM05D003029 ORTHO05D003413 1.2e-21 109.0 452 26.3
Lalb_Chr12g0205611 Lupinus albus HOM05D003029 ORTHO05D003413 1.5e-21 108.6 587 38.5
Prupe.8G196300 Prunus persica HOM05D003029 ORTHO05D003413 7.5e-21 106.3 621 31.6
PSO063G2363 Papaver somniferum HOM05D003029 ORTHO05D003413 3.7e-20 104.0 584 35.3
AUR62018560 Chenopodium quinoa HOM05D003029 ORTHO05D003413 4.8e-20 103.6 575 29.6
Psat7g075040 Pisum sativum HOM05D003029 ORTHO05D003413 6.3e-20 103.2 638 36.5
CsaV3_2G011760 Cucumis sativus L. HOM05D003029 ORTHO05D003413 2.4e-19 101.3 572 36.9
Dinv38178 Davidia involucrata HOM05D003029 ORTHO05D003413 3.1e-19 100.9 250 46.8
Lalb_Chr23g0278361 Lupinus albus HOM05D003029 ORTHO05D003413 1.6e-18 98.6 457 31.9
Sp3g06230 Schrenkiella parvula HOM05D003029 ORTHO05D003413 2.7e-18 97.8 563 31.6
vmacro02792 Vaccinium macrocarpon HOM05D003029 ORTHO05D003413 3.8e-17 94.0 485 32.0
arahy.Tifrunner.gnm1.ann1.R3AU9F Arachis hypogaea HOM05D003029 ORTHO05D003413 6.5e-17 93.2 640 30.6
AUR62020859 Chenopodium quinoa HOM05D003029 ORTHO05D003413 8.5e-17 92.8 492 30.7
BolC1t05561H Brassica oleracea HOM05D003029 ORTHO05D003413 1.1e-16 92.4 579 30.4
Carub.0008s0826 Capsella rubella HOM05D003029 ORTHO05D003413 5.5e-16 90.1 561 37.1
PGR083G2864 Punica granatum HOM05D003029 ORTHO05D003413 5.5e-16 90.1 426 33.1
Oeu034324.1 Olea europaea HOM05D003029 ORTHO05D003413 9.4e-16 89.4 151 48.3
arahy.Tifrunner.gnm1.ann1.AU34HA Arachis hypogaea HOM05D003029 ORTHO05D003413 1.6e-15 88.6 477 32.5
Nitab4.5_0006920g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 1.6e-15 88.6 235 29.8
Sp3g06210 Schrenkiella parvula HOM05D003029 ORTHO05D003413 1.6e-15 88.6 571 30.6
Gohir.A09G206200 Gossypium hirsutum HOM05D003029 ORTHO05D003413 3.6e-15 87.4 319 34.2
BcaB04g21298 Brassica carinata HOM05D003029 ORTHO05D003413 6.1e-15 86.7 552 29.7
CSS0036198 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 8.0e-15 86.3 314 27.1
Thhalv10004154m.g Eutrema salsugineum HOM05D003029 ORTHO05D003413 8.0e-15 86.3 557 33.6
Lsat_1_v5_gn_1_70641 Lactuca sativa HOM05D003029 ORTHO05D003413 8.0e-15 86.3 603 39.3
BcaC06g30775 Brassica carinata HOM05D003029 ORTHO05D003413 1.4e-14 85.5 431 27.4
Ciclev10005071m.g Citrus clementina HOM05D003029 ORTHO05D003413 1.8e-14 85.1 171 35.1
Sopen12g033250 Solanum pennellii HOM05D003029 ORTHO05D003413 2.3e-14 84.7 301 42.5
MBI07_g27661_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 4.0e-14 84.0 212 32.1
C07p39290 Brassica napus HOM05D003029 ORTHO05D003413 5.2e-14 83.6 435 26.4
BolC7t44449H Brassica oleracea HOM05D003029 ORTHO05D003413 5.2e-14 83.6 435 26.4
Manes.15G056400 Manihot esculenta HOM05D003029 ORTHO05D003413 6.8e-14 83.2 385 41.6
Sp2g18960 Schrenkiella parvula HOM05D003029 ORTHO05D003413 1.2e-13 82.4 235 31.9
HPP92_025250 Vanilla planifolia HOM05D003029 ORTHO05D003413 1.2e-13 82.4 207 33.3
CDE05G0723 Ceratophyllum demersum HOM05D003029 ORTHO05D003413 1.5e-13 82.0 234 29.1
DCAR_012677 Daucus carota HOM05D003029 ORTHO05D003413 1.5e-13 82.0 176 33.5
Sed0005118 Sechium edule HOM05D003029 ORTHO05D003413 1.5e-13 82.0 672 33.2
AL625U10010 Arabidopsis lyrata HOM05D003029 ORTHO05D003413 2.0e-13 81.6 248 29.8
Rhsim13G0050000 Rhododendron simsii HOM05D003029 ORTHO05D003413 2.0e-13 81.6 469 28.4
BNapus_Darmor_BZH_scaffold_109p00150 Brassica napus HOM05D003029 ORTHO05D003413 3.4e-13 80.9 215 35.8
BraA01t04389Z Brassica rapa HOM05D003029 ORTHO05D003413 3.4e-13 80.9 572 31.5
Thhalv10020618m.g Eutrema salsugineum HOM05D003029 ORTHO05D003413 4.4e-13 80.5 562 31.5
Solyc12g098467.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 1.3e-12 79.0 257 44.7
MBI07_g42750_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 1.7e-12 78.6 206 34.0
Cc01_g16520 Coffea canephora HOM05D003029 ORTHO05D003413 2.8e-12 77.8 187 29.4
A06p39050 Brassica napus HOM05D003029 ORTHO05D003413 3.7e-12 77.4 436 26.6
HanXRQChr01g0022171 Helianthus annuus HOM05D003029 ORTHO05D003413 6.3e-12 76.6 666 27.6
Actinidia23384 Actinidia chinensis HOM05D003029 ORTHO05D003413 8.3e-12 76.3 481 32.8
BraA03t12696Z Brassica rapa HOM05D003029 ORTHO05D003413 1.1e-11 75.9 553 31.1
Cpa.g.sc157.52 Carica papaya HOM05D003029 ORTHO05D003413 1.1e-11 75.9 426 25.1
A03p35170 Brassica napus HOM05D003029 ORTHO05D003413 1.4e-11 75.5 565 31.3
Potri.001G319500 Populus trichocarpa HOM05D003029 ORTHO05D003413 1.8e-11 75.1 394 43.9
Lj2C1122G5 Lonicera japonica HOM05D003029 ORTHO05D003413 2.4e-11 74.7 150 36.7
BolC3t16546H Brassica oleracea HOM05D003029 ORTHO05D003413 3.1e-11 74.3 414 25.1
HPP92_006969 Vanilla planifolia HOM05D003029 ORTHO05D003413 3.1e-11 74.3 206 31.1
C03p42770 Brassica napus HOM05D003029 ORTHO05D003413 4.1e-11 73.9 557 29.1
Aqoxy2G03937 Aquilegia oxysepala HOM05D003029 ORTHO05D003413 4.5e-10 70.5 237 29.5
AL3G18580 Arabidopsis lyrata HOM05D003029 ORTHO05D003413 4.5e-10 70.5 566 30.4
DCAR_004743 Daucus carota HOM05D003029 ORTHO05D003413 5.9e-10 70.1 167 29.3
Aa31LG5G17850 Aethionema arabicum HOM05D003029 ORTHO05D003413 7.7e-10 69.7 562 27.8
BcaC05g29734 Brassica carinata HOM05D003029 ORTHO05D003413 1.0e-09 69.3 246 30.1
Potri.001G319600 Populus trichocarpa HOM05D003029 ORTHO05D003413 1.3e-09 68.9 402 41.5
BcaC05g29857 Brassica carinata HOM05D003029 ORTHO05D003413 2.3e-09 68.2 222 29.7
A05p40910 Brassica napus HOM05D003029 ORTHO05D003413 5.0e-09 67.0 215 30.7
BraA05t22820Z Brassica rapa HOM05D003029 ORTHO05D003413 5.0e-09 67.0 215 30.7
Oeu057857.3 Olea europaea HOM05D003029 ORTHO05D003413 5.0e-09 67.0 179 28.5
Ah.04g149350 Amaranthus hybridus HOM05D003029 ORTHO05D003413 8.6e-09 66.2 611 30.9
Solyc12g098463.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 8.6e-09 66.2 125 35.2
Zm00001eb210840 Zea mays HOM05D003029 ORTHO05D003413 1.1e-08 65.9 212 27.8
ECA248G1735 Erigeron canadensis HOM05D003029 ORTHO05D003413 1.9e-08 65.1 439 39.6
Sc05g0001900 Simmondsia chinensis HOM05D003029 ORTHO05D003413 1.9e-08 65.1 284 26.4
BraA06t26818Z Brassica rapa HOM05D003029 ORTHO05D003413 2.5e-08 64.7 199 31.7
HanXRQChr11g0344321 Helianthus annuus HOM05D003029 ORTHO05D003413 2.5e-08 64.7 244 31.1
ATR0561G140 Amborella trichopoda HOM05D003029 ORTHO05D003413 4.2e-08 63.9 268 29.9
Medtr3g084030 Medicago truncatula HOM05D005635 ORTHO05D006838 2.1e-07 61.6 238 38.7
SalBow6G0319 Salvia bowleyana HOM05D003029 ORTHO05D003413 3.6e-07 60.8 604 28.0
SalBow6G1280 Salvia bowleyana HOM05D003029 ORTHO05D003413 3.6e-07 60.8 604 28.0
Ah.13g077980 Amaranthus hybridus HOM05D003029 ORTHO05D003413 6.1e-07 60.1 299 25.4
Psat5g100760 Pisum sativum HOM05D003029 ORTHO05D003413 1.0e-06 59.3 109 36.7
Migut.D02515 Erythranthe guttata HOM05D003029 ORTHO05D003413 2.3e-06 58.2 230 26.1


User provided reference genes

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