Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048946.1 Olea europaea HOM05D000228 ORTHO05D002228 2.0e-52 208.8 103 100.0
Oeu054784.1 Olea europaea HOM05D000228 ORTHO05D002228 1.4e-37 159.5 102 83.3
Oeu044857.1 Olea europaea HOM05D000228 ORTHO05D002228 4.4e-15 84.7 106 51.9
Actinidia22658 Actinidia chinensis HOM05D000228 ORTHO05D002228 7.6e-15 84.0 107 49.5
CSS0007103 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D002228 6.4e-14 80.9 104 50.0
Duzib041G0060 Durio zibethinus HOM05D000228 ORTHO05D002228 1.1e-13 80.1 86 52.3
Hma1.2p1_0360F.1_g135920 Hydrangea macrophylla HOM05D000228 ORTHO05D002228 1.9e-13 79.3 104 45.2
Dinv35925 Davidia involucrata HOM05D000228 ORTHO05D002228 3.2e-13 78.6 103 45.6
Haze_18073 Corylus avellana HOM05D000228 ORTHO05D002228 1.2e-12 76.6 106 45.3
Hma1.2p1_0360F.1_g135925 Hydrangea macrophylla HOM05D000228 ORTHO05D002228 1.2e-12 76.6 98 43.9
Hma1.2p1_1473F.1_g285730 Hydrangea macrophylla HOM05D000228 ORTHO05D002228 1.2e-12 76.6 98 43.9
MD08G1093500 Malus domestica HOM05D000228 ORTHO05D002228 1.2e-12 76.6 75 54.7
CAN.G1812.2 Capsicum annuum HOM05D000228 ORTHO05D002228 1.6e-12 76.3 107 43.0
Ca_15933_v3 Cicer arietinum L. HOM05D000228 ORTHO05D002228 2.1e-12 75.9 103 44.7
CsaV3_4G034700 Cucumis sativus L. HOM05D000228 ORTHO05D002228 4.6e-12 74.7 67 58.2
Nitab4.5_0004339g0100 Nicotiana tabacum HOM05D000228 ORTHO05D002228 4.6e-12 74.7 111 45.9
GSVIVG01009433001 Vitis vinifera HOM05D000228 ORTHO05D002228 4.6e-12 74.7 103 42.7
TWI56G1010 Tripterygium wilfordii HOM05D000228 ORTHO05D002228 1.0e-11 73.6 105 42.9
Eucgr.F02303 Eucalyptus grandis HOM05D000228 ORTHO05D002228 2.3e-11 72.4 64 57.8
MELO3C016785.2 Cucumis melo HOM05D000228 ORTHO05D002228 3.0e-11 72.0 84 50.0
Cfa018055 Carpinus fangiana HOM05D000228 ORTHO05D002228 3.9e-11 71.6 106 43.4
MSTRG.25069 Avicennia marina HOM05D000228 ORTHO05D002228 8.7e-11 70.5 108 44.4
Gohir.A02G082400 Gossypium hirsutum HOM05D000228 ORTHO05D002228 8.7e-11 70.5 74 50.0
Gorai.005G101200 Gossypium raimondii HOM05D000228 ORTHO05D002228 8.7e-11 70.5 74 50.0
SalBow7G0925 Salvia bowleyana HOM05D000228 ORTHO05D002228 1.1e-10 70.1 105 46.7
TAR376G0065 Trochodendron aralioides HOM05D000228 ORTHO05D002228 1.9e-10 69.3 73 47.9
Duzib093G1053 Durio zibethinus HOM05D000228 ORTHO05D002228 2.5e-10 68.9 106 43.4
ClCG05G020220 Citrullus lanatus HOM05D000228 ORTHO05D002228 4.3e-10 68.2 76 46.1
Rhsim06G0055000 Rhododendron simsii HOM05D000228 ORTHO05D002228 4.3e-10 68.2 106 43.4
MD15G1077200 Malus domestica HOM05D000228 ORTHO05D002228 7.3e-10 67.4 76 50.0
Ciclev10002565m.g Citrus clementina HOM05D000228 ORTHO05D002228 9.6e-10 67.0 66 51.5
Cc10_g04880 Coffea canephora HOM05D000228 ORTHO05D002228 9.6e-10 67.0 107 43.9
Lalb_Chr23g0267281 Lupinus albus HOM05D000228 ORTHO05D002228 9.6e-10 67.0 106 42.5
QL02p003915 Quercus lobata HOM05D000228 ORTHO05D002228 9.6e-10 67.0 104 41.3
QL01p015188 Quercus lobata HOM05D004258 ORTHO05D002228 1.3e-09 66.6 104 41.3
FAN24G2767 Fragaria x ananassa HOM05D000228 ORTHO05D002228 1.6e-09 66.2 90 41.1
FvH4_2g33750 Fragaria vesca HOM05D000228 ORTHO05D002228 2.1e-09 65.9 90 41.1
Prupe.1G430600 Prunus persica HOM05D000228 ORTHO05D002228 2.1e-09 65.9 78 47.4
Lj4A765G44 Lonicera japonica HOM05D000228 ORTHO05D002228 3.6e-09 65.1 106 43.4
Nn5g30398 Nelumbo nucifera HOM05D000228 ORTHO05D002228 3.6e-09 65.1 73 47.9
RcHm_v2.0_Chr6g0308801 Rosa chinensis HOM05D000228 ORTHO05D002228 3.6e-09 65.1 74 43.2
Thecc.08G001100 Theobroma cacao HOM05D000228 ORTHO05D002228 3.6e-09 65.1 107 43.9
unitig_46.g17916 Utricularia gibba HOM05D000228 ORTHO05D002228 6.2e-09 64.3 52 57.7
MD08G1093000 Malus domestica HOM05D000228 ORTHO05D002228 8.1e-09 63.9 52 57.7
CANSAT25G3330 Cannabis sativa HOM05D000228 ORTHO05D002228 1.1e-08 63.5 107 39.3
PGR031G1232 Punica granatum HOM05D000228 ORTHO05D002228 1.1e-08 63.5 109 39.4
FAN15G0998 Fragaria x ananassa HOM05D000228 ORTHO05D002228 1.4e-08 63.2 52 57.7
Manes.05G177300 Manihot esculenta HOM05D000228 ORTHO05D002228 1.4e-08 63.2 109 41.3
Phvul.009G067500 Phaseolus vulgaris HOM05D000228 ORTHO05D002228 1.8e-08 62.8 109 42.2
TAR625G1311 Trochodendron aralioides HOM05D000228 ORTHO05D002228 1.8e-08 62.8 49 61.2
CiPaw.16G037700 Carya illinoinensis HOM05D000228 ORTHO05D002228 3.1e-08 62.0 107 43.9
Sed0009441 Sechium edule HOM05D000228 ORTHO05D002228 3.1e-08 62.0 67 52.2
Sc02g0007540 Simmondsia chinensis HOM05D000228 ORTHO05D002228 3.1e-08 62.0 105 41.0
PSO170G1549 Papaver somniferum HOM05D000228 ORTHO05D002228 4.0e-08 61.6 43 67.4
Cpa.g.sc21.153 Carica papaya HOM05D000003 ORTHO05D000004 5.3e-08 61.2 107 40.2
SGA_v2.0_scaffold74G24695 Striga asiatica HOM05D000228 ORTHO05D002228 5.3e-08 61.2 110 40.9
Medtr3g102270 Medicago truncatula HOM05D000228 ORTHO05D002228 6.9e-08 60.8 111 38.7
Glyma.04G041900 Glycine max HOM05D000228 ORTHO05D002228 9.0e-08 60.5 79 45.6
Lalb_Chr14g0368461 Lupinus albus HOM05D000228 ORTHO05D002228 9.0e-08 60.5 111 42.3
FAN27G2591 Fragaria x ananassa HOM05D000228 ORTHO05D002228 1.2e-07 60.1 51 54.9
Gohir.A05G205800 Gossypium hirsutum HOM05D000228 ORTHO05D002228 1.2e-07 60.1 75 49.3
Atru.chr13.751 Acer truncatum HOM05D000228 ORTHO05D002228 1.5e-07 59.7 46 56.5
Migut.C00531 Erythranthe guttata HOM05D000228 ORTHO05D002228 1.5e-07 59.7 109 41.3
PSO210G7831 Papaver somniferum HOM05D000228 ORTHO05D002228 1.5e-07 59.7 75 48.0
THA.LOC104820500 Tarenaya hassleriana HOM05D000228 ORTHO05D002228 2.0e-07 59.3 74 43.2
Hund05330 Selenicereus undatus HOM05D000228 ORTHO05D002228 2.6e-07 58.9 109 42.2
arahy.Tifrunner.gnm1.ann1.390KDZ Arachis hypogaea HOM05D000228 ORTHO05D002228 5.8e-07 57.8 67 46.3
AUR62043031 Chenopodium quinoa HOM05D000228 ORTHO05D002228 5.8e-07 57.8 100 37.0
Potri.014G023400 Populus trichocarpa HOM05D000228 ORTHO05D002228 5.8e-07 57.8 100 38.0
arahy.Tifrunner.gnm1.ann1.0X38XU Arachis hypogaea HOM05D000228 ORTHO05D002228 7.6e-07 57.4 35 68.6
CiPaw.15G052000 Carya illinoinensis HOM05D000228 ORTHO05D002228 9.9e-07 57.0 110 38.2
Thhalv10002669m.g Eutrema salsugineum HOM05D000228 ORTHO05D002228 9.9e-07 57.0 90 41.1
AUR62041663 Chenopodium quinoa HOM05D000228 ORTHO05D002228 1.3e-06 56.6 107 35.5
Gohir.D05G209100 Gossypium hirsutum HOM05D000228 ORTHO05D002228 1.3e-06 56.6 75 46.7
Gorai.009G215500 Gossypium raimondii HOM05D000228 ORTHO05D002228 1.3e-06 56.6 75 46.7
CDE07G0926 Ceratophyllum demersum HOM05D000228 ORTHO05D002228 1.7e-06 56.2 68 44.1
Sed0024824 Sechium edule HOM05D000228 ORTHO05D002228 1.7e-06 56.2 46 56.5
CDE04G0164 Ceratophyllum demersum HOM05D000228 ORTHO05D002228 2.2e-06 55.8 45 55.6
DCAR_012794 Daucus carota HOM05D000228 ORTHO05D002228 2.2e-06 55.8 105 41.9
EL10As7g23785 Beta vulgaris HOM05D000228 ORTHO05D002228 2.9e-06 55.5 54 50.0
Lj1g0000098 Lotus japonicus HOM05D000228 ORTHO05D002228 4.9e-06 54.7 105 40.0
THA.LOC104814176 Tarenaya hassleriana HOM05D000228 ORTHO05D002228 4.9e-06 54.7 92 41.3
Sp5g15050 Schrenkiella parvula HOM05D000228 ORTHO05D002228 6.4e-06 54.3 90 41.1
Carub.0005s1290 Capsella rubella HOM05D000228 ORTHO05D002228 8.4e-06 53.9 76 43.4
HanXRQChr09g0267101 Helianthus annuus HOM05D000228 ORTHO05D002228 8.4e-06 53.9 109 37.6


User provided reference genes

Program Settings