Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048866.1 Olea europaea HOM05D004127 ORTHO05D005119 2.5e-29 131.3 61 100.0
Oeu058159.1 Olea europaea HOM05D004127 ORTHO05D005119 6.3e-17 90.1 48 87.5
Nitab4.5_0000363g0190 Nicotiana tabacum HOM05D004127 ORTHO05D005119 4.5e-15 84.0 48 79.2
Nitab4.5_0007407g0040 Nicotiana tabacum HOM05D004127 ORTHO05D005119 4.5e-15 84.0 48 79.2
SalBow3G1425 Salvia bowleyana HOM05D004127 ORTHO05D005119 4.5e-15 84.0 48 79.2
Solyc06g009520.3 Solanum lycopersicum HOM05D004127 ORTHO05D005119 4.5e-15 84.0 48 79.2
Sopen06g004180 Solanum pennellii HOM05D004127 ORTHO05D005119 4.5e-15 84.0 48 79.2
Peaxi162Scf00058g02410 Petunia axillaris HOM05D004127 ORTHO05D005119 5.9e-15 83.6 48 77.1
PGSC0003DMG402007298 Solanum tuberosum HOM05D004127 ORTHO05D005119 5.9e-15 83.6 48 77.1
Gohir.D12G127400 Gossypium hirsutum HOM05D004127 ORTHO05D005119 7.7e-15 83.2 48 75.0
Gorai.008G138300 Gossypium raimondii HOM05D004127 ORTHO05D005119 7.7e-15 83.2 48 75.0
CAN.G1280.36 Capsicum annuum HOM05D004127 ORTHO05D005119 1.0e-14 82.8 48 77.1
Gohir.A12G123700 Gossypium hirsutum HOM05D004127 ORTHO05D005119 1.0e-14 82.8 48 72.9
ClCG09G004980 Citrullus lanatus HOM05D004127 ORTHO05D005119 1.3e-14 82.4 56 67.9
MELO3C015913.2 Cucumis melo HOM05D004127 ORTHO05D005119 1.3e-14 82.4 56 67.9
CsaV3_7G030080 Cucumis sativus L. HOM05D004127 ORTHO05D005119 1.3e-14 82.4 56 67.9
Dinv33130 Davidia involucrata HOM05D004127 ORTHO05D005119 1.7e-14 82.0 56 67.9
Migut.D00068 Erythranthe guttata HOM05D004127 ORTHO05D005119 1.7e-14 82.0 56 69.6
PGR083G1839 Punica granatum HOM05D004127 ORTHO05D005119 1.7e-14 82.0 56 66.1
TWI75G0020 Tripterygium wilfordii HOM05D004127 ORTHO05D005119 1.7e-14 82.0 56 66.1
MSTRG.18089 Avicennia marina HOM05D004127 ORTHO05D005119 2.2e-14 81.6 48 75.0
Gohir.A11G108300 Gossypium hirsutum HOM05D004127 ORTHO05D005119 2.2e-14 81.6 48 72.9
Gorai.007G121300 Gossypium raimondii HOM05D004127 ORTHO05D005119 2.2e-14 81.6 48 72.9
TAR362G1073 Trochodendron aralioides HOM05D004127 ORTHO05D005119 2.2e-14 81.6 48 75.0
Cfa005772 Carpinus fangiana HOM05D004127 ORTHO05D005119 3.8e-14 80.9 56 66.1
Haze_05068 Corylus avellana HOM05D004127 ORTHO05D005119 3.8e-14 80.9 56 66.1
Gohir.D11G112800 Gossypium hirsutum HOM05D004127 ORTHO05D005119 3.8e-14 80.9 48 70.8
Sed0018206 Sechium edule HOM05D004127 ORTHO05D005119 3.8e-14 80.9 56 66.1
GSVIVG01028141001 Vitis vinifera HOM05D004127 ORTHO05D005119 3.8e-14 80.9 48 72.9
Cc01_g21590 Coffea canephora HOM05D004127 ORTHO05D005119 5.0e-14 80.5 56 66.1
Actinidia17915 Actinidia chinensis HOM05D004127 ORTHO05D005119 6.5e-14 80.1 48 72.9
AL4G26650 Arabidopsis lyrata HOM05D004127 ORTHO05D005119 6.5e-14 80.1 56 62.5
MSTRG.21699 Avicennia marina HOM05D004127 ORTHO05D005119 6.5e-14 80.1 48 70.8
Eucgr.H00998 Eucalyptus grandis HOM05D004127 ORTHO05D005119 6.5e-14 80.1 56 66.1
Manes.01G229400 Manihot esculenta HOM05D004127 ORTHO05D005119 6.5e-14 80.1 48 72.9
TAR633G0666 Trochodendron aralioides HOM05D004127 ORTHO05D005119 6.5e-14 80.1 48 72.9
Phvul.008G024400 Phaseolus vulgaris HOM05D004127 ORTHO05D005119 8.5e-14 79.7 48 70.8
Actinidia21391 Actinidia chinensis HOM05D004127 ORTHO05D005119 1.1e-13 79.3 48 70.8
CARHR125030 Cardamine hirsuta HOM05D004127 ORTHO05D005119 1.1e-13 79.3 56 62.5
Lj2C1208T0 Lonicera japonica HOM05D004127 ORTHO05D005119 1.1e-13 79.3 48 72.9
AT2G31400 Arabidopsis thaliana HOM05D004127 ORTHO05D005119 1.4e-13 79.0 56 60.7
CANSAT25G0729 Cannabis sativa HOM05D004127 ORTHO05D005119 1.4e-13 79.0 48 70.8
Thhalv10016252m.g Eutrema salsugineum HOM05D004127 ORTHO05D005119 1.4e-13 79.0 56 62.5
MD09G1284400 Malus domestica HOM05D004127 ORTHO05D005119 1.4e-13 79.0 56 66.1
Prupe.3G010400 Prunus persica HOM05D004127 ORTHO05D005119 1.4e-13 79.0 56 64.3
QL12p019388 Quercus lobata HOM05D004127 ORTHO05D005119 1.9e-13 78.6 56 64.3
Lalb_Chr10g0092591 Lupinus albus HOM05D004127 ORTHO05D005119 2.5e-13 78.2 55 65.5
A05p14200 Brassica napus HOM05D004127 ORTHO05D005119 3.2e-13 77.8 56 60.7
CSS0010117 Camellia sinensis var. sinensis HOM05D004127 ORTHO05D005119 3.2e-13 77.8 48 70.8
Carub.0004s1272 Capsella rubella HOM05D004127 ORTHO05D005119 3.2e-13 77.8 56 60.7
COL.COLO4_23210 Corchorus olitorius HOM05D004127 ORTHO05D005119 3.2e-13 77.8 48 70.8
Duzib138G0806 Durio zibethinus HOM05D004127 ORTHO05D005119 3.2e-13 77.8 48 66.7
BraA05t20351Z Brassica rapa HOM05D004127 ORTHO05D005119 4.2e-13 77.4 56 60.7
CSS0036979 Camellia sinensis var. sinensis HOM05D004127 ORTHO05D005119 4.2e-13 77.4 48 68.8
Rhsim13G0003800 Rhododendron simsii HOM05D004127 ORTHO05D005119 4.2e-13 77.4 48 68.8
Sp4g13890 Schrenkiella parvula HOM05D004127 ORTHO05D005119 4.2e-13 77.4 56 60.7
VMungo1383G2579 Vigna mungo HOM05D004127 ORTHO05D005119 4.2e-13 77.4 48 68.8
Aa31LG1G8250 Aethionema arabicum HOM05D004127 ORTHO05D005119 5.5e-13 77.0 56 58.9
FvH4_1g27040 Fragaria vesca HOM05D004127 ORTHO05D005119 5.5e-13 77.0 56 62.5
FAN26G0855 Fragaria x ananassa HOM05D004127 ORTHO05D005119 5.5e-13 77.0 56 62.5
FAN28G2982 Fragaria x ananassa HOM05D004127 ORTHO05D005119 5.5e-13 77.0 56 62.5
Manes.05G014100 Manihot esculenta HOM05D004127 ORTHO05D005119 5.5e-13 77.0 56 60.7
Sabra02G0162500 Salix brachista HOM05D004127 ORTHO05D005119 5.5e-13 77.0 56 62.5
BcaB02g10389 Brassica carinata HOM05D004127 ORTHO05D005119 7.2e-13 76.6 56 60.7
FAN19G1378 Fragaria x ananassa HOM05D004127 ORTHO05D005119 7.2e-13 76.6 48 68.8
FAN23G1564 Fragaria x ananassa HOM05D004127 ORTHO05D005119 7.2e-13 76.6 56 62.5
Glyma.08G254000 Glycine max HOM05D004127 ORTHO05D005119 7.2e-13 76.6 48 64.6
Glyma.18G276500 Glycine max HOM05D004127 ORTHO05D005119 7.2e-13 76.6 48 64.6
C04p61120 Brassica napus HOM05D004127 ORTHO05D005119 9.4e-13 76.3 56 60.7
Ciclev10018807m.g Citrus clementina HOM05D004127 ORTHO05D005119 9.4e-13 76.3 56 60.7
Thhalv10006755m.g Eutrema salsugineum HOM05D004127 ORTHO05D005119 9.4e-13 76.3 56 58.9
Thhalv10016219m.g Eutrema salsugineum HOM05D004127 ORTHO05D005119 9.4e-13 76.3 56 60.7
Nn4g25565 Nelumbo nucifera HOM05D004127 ORTHO05D005119 9.4e-13 76.3 48 66.7
Actinidia25862 Actinidia chinensis HOM05D004127 ORTHO05D005119 1.2e-12 75.9 56 62.5
EL10As5g23557 Beta vulgaris HOM05D004127 ORTHO05D005119 1.2e-12 75.9 48 70.8
Rhsim01G0292100 Rhododendron simsii HOM05D004127 ORTHO05D005119 1.2e-12 75.9 56 62.5
THA.LOC104809612 Tarenaya hassleriana HOM05D004127 ORTHO05D005119 1.2e-12 75.9 56 58.9
THA.LOC104819204 Tarenaya hassleriana HOM05D004127 ORTHO05D005119 1.2e-12 75.9 56 60.7
Thecc.01G315900 Theobroma cacao HOM05D004127 ORTHO05D005119 1.2e-12 75.9 48 64.6
vmacro02392 Vaccinium macrocarpon HOM05D004127 ORTHO05D005119 1.2e-12 75.9 48 66.7
CiPaw.07G119200 Carya illinoinensis HOM05D004127 ORTHO05D005119 1.6e-12 75.5 56 60.7
arahy.Tifrunner.gnm1.ann1.1I1C4M Arachis hypogaea HOM05D004127 ORTHO05D005119 2.1e-12 75.1 48 70.8
arahy.Tifrunner.gnm1.ann1.X62M7H Arachis hypogaea HOM05D004127 ORTHO05D005119 2.1e-12 75.1 48 70.8
BcaB06g28547 Brassica carinata HOM05D004127 ORTHO05D005119 2.1e-12 75.1 56 58.9
BcaC02g07981 Brassica carinata HOM05D004127 ORTHO05D005119 2.1e-12 75.1 56 58.9
A04p24290 Brassica napus HOM05D004127 ORTHO05D005119 2.1e-12 75.1 56 58.9
BolC4t27597H Brassica oleracea HOM05D004127 ORTHO05D005119 2.1e-12 75.1 56 58.9
BraA04t17948Z Brassica rapa HOM05D004127 ORTHO05D005119 2.1e-12 75.1 56 58.9
Atru.BG.78.p Acer truncatum HOM05D004127 ORTHO05D005119 2.7e-12 74.7 46 71.7
Ah.02g112420 Amaranthus hybridus HOM05D004127 ORTHO05D005119 2.7e-12 74.7 48 68.8
CiPaw.08G088200 Carya illinoinensis HOM05D004127 ORTHO05D005119 2.7e-12 74.7 56 62.5
Lj1g0020612 Lotus japonicus HOM05D004127 ORTHO05D005119 2.7e-12 74.7 55 58.2
Potri.014G118500 Populus trichocarpa HOM05D004127 ORTHO05D005119 2.7e-12 74.7 56 60.7
Sabra14G0088000 Salix brachista HOM05D004127 ORTHO05D005119 2.7e-12 74.7 56 60.7
Actinidia20980 Actinidia chinensis HOM05D004127 ORTHO05D005119 3.6e-12 74.3 48 68.8
BcaC02g11240 Brassica carinata HOM05D004127 ORTHO05D005119 3.6e-12 74.3 44 70.5
C04p18930 Brassica napus HOM05D004127 ORTHO05D005119 3.6e-12 74.3 56 58.9
BolC4t23423H Brassica oleracea HOM05D004127 ORTHO05D005119 3.6e-12 74.3 56 58.9
MD17G1277600 Malus domestica HOM05D004127 ORTHO05D005119 3.6e-12 74.3 44 72.7
Nn3g21732 Nelumbo nucifera HOM05D004127 ORTHO05D005119 4.6e-12 73.9 48 64.6
Aqoxy2G02720 Aquilegia oxysepala HOM05D004127 ORTHO05D005119 6.1e-12 73.6 56 58.9
DCAR_012332 Daucus carota HOM05D004127 ORTHO05D005119 6.1e-12 73.6 56 62.5
PSO170G0800 Papaver somniferum HOM05D004127 ORTHO05D005119 7.9e-12 73.2 48 66.7
PSO357G0209 Papaver somniferum HOM05D004127 ORTHO05D005119 7.9e-12 73.2 48 66.7
ATR0693G036 Amborella trichopoda HOM05D004127 ORTHO05D005119 1.0e-11 72.8 48 64.6
RcHm_v2.0_Chr3g0487361 Rosa chinensis HOM05D004127 ORTHO05D005119 1.4e-11 72.4 56 62.5
Hund09649 Selenicereus undatus HOM05D004127 ORTHO05D005119 1.8e-11 72.0 48 64.6
TPR.G3276 Trifolium pratense HOM05D004127 ORTHO05D005119 1.8e-11 72.0 62 56.5
ECA247G3842 Erigeron canadensis HOM05D004127 ORTHO05D005119 3.0e-11 71.2 48 70.8
MBI18_g03637_MAGBIO Magnolia biondii HOM05D004127 ORTHO05D005119 3.0e-11 71.2 48 64.6
Ca_06960_v3 Cicer arietinum L. HOM05D004127 ORTHO05D005119 3.9e-11 70.9 56 55.4
HanXRQChr10g0285041 Helianthus annuus HOM05D004127 ORTHO05D005119 3.9e-11 70.9 48 68.8
Potri.002G193900 Populus trichocarpa HOM05D004127 ORTHO05D005119 5.1e-11 70.5 56 57.1
vmacro15103 Vaccinium macrocarpon HOM05D004127 ORTHO05D005119 5.1e-11 70.5 62 58.1
A03p17580 Brassica napus HOM05D004127 ORTHO05D005119 8.8e-11 69.7 56 57.1
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 8.8e-11 69.7 56 57.1
Lsat_1_v5_gn_9_4701 Lactuca sativa HOM05D004127 ORTHO05D005119 1.1e-10 69.3 48 66.7
Medtr7g017525 Medicago truncatula HOM05D004127 ORTHO05D005119 1.5e-10 68.9 51 56.9
Medtr7g017530 Medicago truncatula HOM05D004127 ORTHO05D005119 1.5e-10 68.9 51 56.9
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 2.0e-10 68.6 56 57.1
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 2.0e-10 68.6 56 57.1
AagrBONN_evm.TU.Sc2ySwM_117.2521 Anthoceros agrestis HOM05D004127 ORTHO05D005119 2.6e-10 68.2 62 51.6
BcaC01g05953 Brassica carinata HOM05D004127 ORTHO05D005119 3.3e-10 67.8 55 58.2
Medtr7g017570 Medicago truncatula HOM05D004127 ORTHO05D005119 1.7e-09 65.5 62 50.0
Psat0s287g0280 Pisum sativum HOM05D004127 ORTHO05D005119 1.7e-09 65.5 59 52.5
Zm00001eb028500 Zea mays HOM05D004127 ORTHO05D005119 2.2e-09 65.1 44 65.9
Mapoly0036s0086 Marchantia polymorpha HOM05D004127 ORTHO05D005119 2.8e-09 64.7 56 53.6
Os12g0562300 Oryza sativa ssp. japonica HOM05D004127 ORTHO05D005119 2.8e-09 64.7 44 61.4
CDE02G4605 Ceratophyllum demersum HOM05D004127 ORTHO05D005119 6.3e-09 63.5 51 54.9
CDE08G0979 Ceratophyllum demersum HOM05D004127 ORTHO05D005119 6.3e-09 63.5 51 54.9
Pp3c6_15900 Physcomitrium patens HOM05D004127 ORTHO05D005119 6.9e-08 60.1 55 50.9
CBR_g9159 Chara braunii HOM05D004127 ORTHO05D005119 1.5e-07 58.9 49 51.0
SMO365G0082 Selaginella moellendorffii HOM05D004127 ORTHO05D005119 1.5e-07 58.9 52 51.9
HPP92_017249 Vanilla planifolia HOM05D004127 ORTHO05D005119 2.0e-07 58.5 48 47.9
HPP92_017253 Vanilla planifolia HOM05D004127 ORTHO05D005119 2.0e-07 58.5 48 47.9
AUR62011779 Chenopodium quinoa HOM05D004127 ORTHO05D005119 3.8e-06 54.3 38 65.8
AUR62024623 Chenopodium quinoa HOM05D004127 ORTHO05D005119 5.0e-06 53.9 38 63.2


User provided reference genes

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