Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 1.3e-100 369.8 195 100.0
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 1.8e-70 269.6 188 78.7
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 7.3e-67 257.7 197 74.6
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 9.5e-67 257.3 199 71.9
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 1.2e-66 256.9 199 71.9
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 1.6e-66 256.5 160 85.6
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 2.1e-66 256.1 200 73.0
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 3.6e-66 255.4 204 69.1
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 8.0e-66 254.2 196 73.0
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.4e-65 253.4 197 71.6
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.4e-65 253.4 161 82.6
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 4.0e-65 251.9 200 72.5
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 6.8e-65 251.1 200 72.5
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 8.9e-65 250.8 200 70.0
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 8.9e-65 250.8 200 70.0
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 1.5e-64 250.0 197 73.1
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 2.6e-64 249.2 196 73.5
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 5.7e-64 248.1 200 72.0
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 9.8e-64 247.3 170 78.2
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 1.7e-63 246.5 195 70.8
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 2.2e-63 246.1 203 70.0
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 2.2e-63 246.1 204 68.1
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 1.8e-62 243.0 198 70.7
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 3.2e-62 242.3 176 75.6
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 1.2e-61 240.4 203 69.0
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.2e-61 240.4 203 69.0
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 1.2e-61 240.4 161 78.3
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 1.2e-61 240.4 161 78.9
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 1.6e-61 240.0 168 76.8
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 3.5e-61 238.8 182 74.2
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 3.5e-61 238.8 165 77.0
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 4.6e-61 238.4 185 71.9
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 4.6e-61 238.4 201 70.1
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 5.9e-61 238.0 164 77.4
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 7.8e-61 237.7 184 73.9
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 1.0e-60 237.3 165 77.0
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.3e-60 236.9 203 69.0
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.3e-60 236.9 203 68.5
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 1.3e-60 236.9 169 75.1
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 1.3e-60 236.9 178 75.8
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 2.3e-60 236.1 202 67.3
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 2.3e-60 236.1 174 73.6
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 2.3e-60 236.1 170 76.5
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 2.3e-60 236.1 187 70.1
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 2.3e-60 236.1 200 67.5
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 3.0e-60 235.7 170 76.5
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 3.0e-60 235.7 180 74.4
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 3.9e-60 235.3 200 69.0
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 5.0e-60 235.0 184 70.7
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 5.0e-60 235.0 169 76.3
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 5.0e-60 235.0 182 69.8
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 6.6e-60 234.6 160 77.5
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 1.1e-59 233.8 168 78.6
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 1.5e-59 233.4 195 68.2
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 1.9e-59 233.0 201 69.7
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 1.9e-59 233.0 189 68.3
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 2.5e-59 232.6 168 78.0
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 2.5e-59 232.6 152 82.2
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 5.6e-59 231.5 208 66.3
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 7.3e-59 231.1 159 79.2
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 9.5e-59 230.7 162 77.2
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 9.5e-59 230.7 188 69.1
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.6e-58 229.9 167 74.3
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 1.6e-58 229.9 167 74.3
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 1.6e-58 229.9 201 67.7
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 2.1e-58 229.6 202 68.3
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 2.1e-58 229.6 161 77.0
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 2.1e-58 229.6 180 71.7
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 2.8e-58 229.2 166 75.9
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 2.8e-58 229.2 166 75.9
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.8e-58 229.2 167 74.3
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 3.6e-58 228.8 158 76.6
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 6.2e-58 228.0 195 67.2
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 6.2e-58 228.0 154 79.9
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 6.2e-58 228.0 187 67.9
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 1.1e-57 227.3 178 71.9
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 1.4e-57 226.9 199 67.8
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 1.8e-57 226.5 201 67.7
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 1.8e-57 226.5 201 67.7
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 1.8e-57 226.5 199 68.3
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 1.8e-57 226.5 207 63.3
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 2.3e-57 226.1 196 66.3
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 2.3e-57 226.1 204 66.2
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 3.1e-57 225.7 149 81.2
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 3.1e-57 225.7 193 68.4
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 4.0e-57 225.3 193 66.3
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 8.9e-57 224.2 202 66.8
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 5.8e-56 221.5 152 77.0
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 7.5e-56 221.1 167 73.1
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 4.9e-55 218.4 137 83.2
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 6.4e-55 218.0 167 74.3
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 8.3e-55 217.6 168 73.2
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 1.1e-54 217.2 172 71.5
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 1.4e-54 216.9 174 70.7
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.4e-54 216.9 169 74.0
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 2.4e-54 216.1 188 67.0
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 2.0e-53 213.0 188 66.0
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 3.5e-53 212.2 188 66.0
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 1.0e-52 210.7 186 64.5
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 1.2e-50 203.8 147 74.8
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 1.1e-49 200.7 199 61.3
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 4.0e-49 198.7 156 69.2
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 3.7e-47 192.2 160 66.9
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 3.2e-46 189.1 117 84.6
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 9.2e-46 187.6 120 82.5
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 2.7e-45 186.0 180 59.4
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 3.5e-45 185.7 144 68.1
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.0e-44 184.1 121 77.7
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 1.7e-44 183.3 117 83.8
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 3.0e-44 182.6 196 56.6
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 5.1e-44 181.8 130 75.4
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 6.6e-44 181.4 175 57.1
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 1.3e-39 167.2 170 54.1
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 1.4e-38 163.7 109 78.9
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 7.8e-37 157.9 131 61.8
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 8.1e-34 147.9 161 55.9
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 3.1e-33 146.0 159 59.7
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 3.1e-33 146.0 141 55.3
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 1.2e-32 144.1 135 58.5
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.9e-31 139.4 87 83.9
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 6.4e-31 138.3 87 83.9
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 1.1e-30 137.5 87 82.8
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 4.6e-29 132.1 138 58.0
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 1.9e-27 126.7 92 76.1
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 6.2e-26 121.7 99 65.7
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 9.3e-22 107.8 91 63.7
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 7.4e-19 98.2 101 58.4
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 3.7e-18 95.9 65 67.7
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 4.9e-07 58.9 105 35.2


User provided reference genes

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