Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048721.1 Olea europaea HOM05D000901 ORTHO05D004766 6.1e-137 490.7 234 100.0
Peaxi162Scf00064g00828 Petunia axillaris HOM05D000901 ORTHO05D004766 7.3e-82 307.8 201 68.7
Nitab4.5_0000498g0060 Nicotiana tabacum HOM05D000901 ORTHO05D004766 9.6e-82 307.4 216 64.8
Nitab4.5_0002730g0020 Nicotiana tabacum HOM05D000901 ORTHO05D004766 3.6e-81 305.4 228 62.3
CAN.G1517.1 Capsicum annuum HOM05D000901 ORTHO05D004766 8.1e-81 304.3 208 67.3
CSS0047191 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 2.4e-80 302.8 232 64.7
SGA_v2.0_scaffold145G36086 Striga asiatica HOM05D000901 ORTHO05D004766 3.1e-80 302.4 222 64.9
PGSC0003DMG400029329 Solanum tuberosum HOM05D000901 ORTHO05D004766 4.0e-80 302.0 214 63.6
CSS0049889 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 2.0e-79 299.7 232 64.2
Migut.C00891 Erythranthe guttata HOM05D000901 ORTHO05D004766 5.8e-79 298.1 234 60.3
MSTRG.1154 Avicennia marina HOM05D000901 ORTHO05D004766 9.9e-79 297.4 193 71.5
MSTRG.1155 Avicennia marina HOM05D000901 ORTHO05D004766 1.3e-78 297.0 195 69.2
Nitab4.5_0001936g0050 Nicotiana tabacum HOM05D000901 ORTHO05D004766 2.9e-78 295.8 211 64.9
Manes.05G143600 Manihot esculenta HOM05D000901 ORTHO05D004766 1.1e-77 293.9 226 62.8
Solyc12g094380.2 Solanum lycopersicum HOM05D000901 ORTHO05D004766 1.4e-77 293.5 213 63.4
TAR381G0201 Trochodendron aralioides HOM05D000901 ORTHO05D004766 1.4e-77 293.5 225 62.2
Actinidia37946 Actinidia chinensis HOM05D000901 ORTHO05D004766 2.4e-77 292.7 230 59.6
Sopen12g031250 Solanum pennellii HOM05D000901 ORTHO05D004766 3.2e-77 292.4 230 60.0
Lj4A800T39 Lonicera japonica HOM05D000901 ORTHO05D004766 7.1e-77 291.2 211 63.5
vmacro21856 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 7.1e-77 291.2 198 67.2
Sopen12g031260 Solanum pennellii HOM05D000901 ORTHO05D004766 1.2e-76 290.4 213 62.4
Peaxi162Scf00289g00084 Petunia axillaris HOM05D000901 ORTHO05D004766 2.7e-76 289.3 218 60.1
CSS0010771 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 1.0e-75 287.3 199 66.8
DCAR_013891 Daucus carota HOM05D000901 ORTHO05D004766 1.0e-75 287.3 198 68.7
COL.COLO4_26098 Corchorus olitorius HOM05D000901 ORTHO05D004766 3.0e-75 285.8 227 59.5
Potri.005G244400 Populus trichocarpa HOM05D000901 ORTHO05D004766 8.7e-75 284.3 200 64.5
Glyma.04G021300 Glycine max HOM05D000901 ORTHO05D004766 1.1e-74 283.9 215 61.4
Sabra05G0189000 Salix brachista HOM05D000901 ORTHO05D004766 1.1e-74 283.9 212 63.7
EL10Ac1g02116 Beta vulgaris HOM05D000901 ORTHO05D004766 2.5e-74 282.7 200 66.5
Cfa013996 Carpinus fangiana HOM05D000901 ORTHO05D004766 2.5e-74 282.7 209 65.1
Lj1g0003310 Lotus japonicus HOM05D000901 ORTHO05D004766 1.6e-73 280.0 223 58.7
Cc10_g01220 Coffea canephora HOM05D000901 ORTHO05D004766 6.2e-73 278.1 212 64.6
Phvul.009G019200 Phaseolus vulgaris HOM05D000901 ORTHO05D004766 1.1e-72 277.3 220 58.6
Thecc.08G049900 Theobroma cacao HOM05D000901 ORTHO05D004766 1.8e-72 276.6 196 64.8
AUR62036698 Chenopodium quinoa HOM05D000901 ORTHO05D004766 2.4e-72 276.2 201 65.2
SalBow7G4280 Salvia bowleyana HOM05D000901 ORTHO05D004766 2.4e-72 276.2 221 60.6
vmacro04376 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 3.1e-72 275.8 211 64.9
Hund01706 Selenicereus undatus HOM05D000901 ORTHO05D004766 4.0e-72 275.4 208 63.5
Lalb_Chr11g0061781 Lupinus albus HOM05D000901 ORTHO05D004766 6.9e-72 274.6 218 59.6
Thecc.08G050000 Theobroma cacao HOM05D000901 ORTHO05D004766 1.5e-71 273.5 211 60.7
Ciclev10002332m.g Citrus clementina HOM05D000901 ORTHO05D004766 2.0e-71 273.1 221 58.4
Lj4A18T108 Lonicera japonica HOM05D000901 ORTHO05D004766 2.0e-71 273.1 211 62.6
Cpa.g.sc26.277 Carica papaya HOM05D000901 ORTHO05D004766 4.5e-71 271.9 215 58.6
FvH4_2g38030 Fragaria vesca HOM05D000901 ORTHO05D004766 4.5e-71 271.9 210 60.5
arahy.Tifrunner.gnm1.ann1.K685T3 Arachis hypogaea HOM05D000901 ORTHO05D004766 7.6e-71 271.2 206 59.2
Hund05157 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.3e-70 270.4 215 60.0
Hund05162 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.3e-70 270.4 215 60.0
arahy.Tifrunner.gnm1.ann1.774XMB Arachis hypogaea HOM05D000901 ORTHO05D004766 2.2e-70 269.6 206 59.2
MBI05_g36763_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 2.2e-70 269.6 207 62.8
TPR.G9568 Trifolium pratense HOM05D000901 ORTHO05D004766 2.2e-70 269.6 206 60.7
Glyma.04G021400 Glycine max HOM05D000901 ORTHO05D004766 2.9e-70 269.2 229 56.3
Nn6g31933 Nelumbo nucifera HOM05D000901 ORTHO05D004766 2.9e-70 269.2 206 62.6
Prupe.1G360400 Prunus persica HOM05D000901 ORTHO05D004766 2.9e-70 269.2 205 62.0
Duzib041G0373 Durio zibethinus HOM05D000901 ORTHO05D004766 3.8e-70 268.9 234 56.8
Hund05158 Selenicereus undatus HOM05D000901 ORTHO05D004766 3.8e-70 268.9 191 65.4
Hund05161 Selenicereus undatus HOM05D000901 ORTHO05D004766 3.8e-70 268.9 191 65.4
CiPaw.07G144500 Carya illinoinensis HOM05D000901 ORTHO05D004766 4.9e-70 268.5 211 60.2
PSO063G0231 Papaver somniferum HOM05D000901 ORTHO05D004766 1.1e-69 267.3 211 60.2
Gorai.010G001700 Gossypium raimondii HOM05D000901 ORTHO05D004766 1.9e-69 266.5 207 58.9
Sc15g0004710 Simmondsia chinensis HOM05D000901 ORTHO05D004766 1.9e-69 266.5 193 65.8
PSO782G4846 Papaver somniferum HOM05D000901 ORTHO05D004766 2.4e-69 266.2 205 61.0
GSVIVG01008758001 Vitis vinifera HOM05D000901 ORTHO05D004766 2.4e-69 266.2 220 60.5
ECA238G3494 Erigeron canadensis HOM05D000901 ORTHO05D004766 5.5e-69 265.0 194 63.9
Medtr0332s0020 Medicago truncatula HOM05D000901 ORTHO05D004766 5.5e-69 265.0 206 59.2
DCAR_025124 Daucus carota HOM05D000901 ORTHO05D004766 9.3e-69 264.2 197 62.9
Aqoxy5G01833 Aquilegia oxysepala HOM05D000901 ORTHO05D004766 1.2e-68 263.8 202 59.9
HanXRQChr06g0184521 Helianthus annuus HOM05D000901 ORTHO05D004766 2.1e-68 263.1 212 58.0
Potri.002G017500 Populus trichocarpa HOM05D000901 ORTHO05D004766 2.7e-68 262.7 191 63.9
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 2.7e-68 262.7 189 62.4
RcHm_v2.0_Chr6g0303571 Rosa chinensis HOM05D000901 ORTHO05D004766 4.6e-68 261.9 205 59.5
DCAR_013892 Daucus carota HOM05D000901 ORTHO05D004766 7.9e-68 261.2 198 62.6
MD08G1008700 Malus domestica HOM05D000901 ORTHO05D004766 1.0e-67 260.8 205 60.0
Ah.00g000720 Amaranthus hybridus HOM05D000901 ORTHO05D004766 1.3e-67 260.4 212 60.4
Thhalv10019591m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 1.3e-67 260.4 203 60.1
QL02p012636 Quercus lobata HOM05D000901 ORTHO05D004766 1.3e-67 260.4 229 55.5
HanXRQChr14g0429411 Helianthus annuus HOM05D000901 ORTHO05D004766 2.3e-67 259.6 219 57.5
MD15G1007500 Malus domestica HOM05D000901 ORTHO05D004766 2.3e-67 259.6 210 58.1
Sp5g31130 Schrenkiella parvula HOM05D000901 ORTHO05D004766 2.3e-67 259.6 218 56.4
FAN20G3106 Fragaria x ananassa HOM05D000901 ORTHO05D004766 3.0e-67 259.2 193 61.7
BcaC03g15640 Brassica carinata HOM05D000901 ORTHO05D004766 1.1e-66 257.3 214 58.9
BolC2t09354H Brassica oleracea HOM05D000901 ORTHO05D004766 1.9e-66 256.5 208 59.1
BraA02t07071Z Brassica rapa HOM05D000901 ORTHO05D004766 1.9e-66 256.5 208 59.1
ClCG08G014120 Citrullus lanatus HOM05D000901 ORTHO05D004766 4.3e-66 255.4 212 57.1
AUR62013896 Chenopodium quinoa HOM05D000901 ORTHO05D004766 5.6e-66 255.0 213 57.7
Ca_11598_v3 Cicer arietinum L. HOM05D000901 ORTHO05D004766 7.4e-66 254.6 205 55.6
Sed0006708 Sechium edule HOM05D000901 ORTHO05D004766 9.6e-66 254.2 211 56.4
A02p20390 Brassica napus HOM05D000901 ORTHO05D004766 1.6e-65 253.4 208 58.7
C02p33510 Brassica napus HOM05D000901 ORTHO05D004766 1.6e-65 253.4 207 58.5
Carub.0002s2290 Capsella rubella HOM05D000901 ORTHO05D004766 1.6e-65 253.4 196 59.2
TWI56G0802 Tripterygium wilfordii HOM05D000901 ORTHO05D004766 1.6e-65 253.4 229 55.5
Lsat_1_v5_gn_2_7381 Lactuca sativa HOM05D000901 ORTHO05D004766 3.7e-65 252.3 202 57.9
AT1G76020 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 4.8e-65 251.9 196 59.2
CANSAT25G0446 Cannabis sativa HOM05D000901 ORTHO05D004766 4.8e-65 251.9 224 56.7
MELO3C011351.2 Cucumis melo HOM05D000901 ORTHO05D004766 1.4e-64 250.4 216 54.6
Eucgr.F03719 Eucalyptus grandis HOM05D000901 ORTHO05D004766 3.1e-64 249.2 209 56.5
unitig_32.g11240 Utricularia gibba HOM05D000901 ORTHO05D004766 5.3e-64 248.4 206 56.8
CsaV3_2G024310 Cucumis sativus L. HOM05D000901 ORTHO05D004766 6.9e-64 248.1 211 55.9
PGR031G2145 Punica granatum HOM05D000901 ORTHO05D004766 9.0e-64 247.7 233 52.4
A07p41510 Brassica napus HOM05D000901 ORTHO05D004766 1.5e-63 246.9 210 58.1
CARHR069550 Cardamine hirsuta HOM05D000901 ORTHO05D004766 1.7e-62 243.4 206 57.3
ATR0661G262 Amborella trichopoda HOM05D000901 ORTHO05D004766 2.2e-62 243.0 226 52.7
Psat7g082200 Pisum sativum HOM05D000901 ORTHO05D004766 2.2e-62 243.0 191 58.6
Gohir.A06G001500 Gossypium hirsutum HOM05D000901 ORTHO05D004766 2.9e-62 242.7 168 65.5
Nn5g30828 Nelumbo nucifera HOM05D000901 ORTHO05D004766 3.8e-62 242.3 221 51.6
C06p49920 Brassica napus HOM05D000901 ORTHO05D004766 6.5e-62 241.5 210 55.7
Aa31LG4G6150 Aethionema arabicum HOM05D000901 ORTHO05D004766 1.1e-61 240.7 207 57.0
Eucgr.F01691 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.9e-61 240.0 213 56.3
THA.LOC104813773 Tarenaya hassleriana HOM05D000901 ORTHO05D004766 1.9e-61 240.0 226 53.1
CDE09G0289 Ceratophyllum demersum HOM05D000901 ORTHO05D004766 2.5e-61 239.6 198 57.1
HPP92_026881 Vanilla planifolia HOM05D000901 ORTHO05D004766 2.5e-61 239.6 209 56.5
BcaC08g47093 Brassica carinata HOM05D000901 ORTHO05D004766 4.2e-61 238.8 210 56.2
Sp1g17990 Schrenkiella parvula HOM05D000901 ORTHO05D004766 9.3e-61 237.7 215 53.5
BcaC08g47306 Brassica carinata HOM05D000901 ORTHO05D004766 1.2e-60 237.3 210 55.2
BcaC08g47307 Brassica carinata HOM05D000901 ORTHO05D004766 1.2e-60 237.3 210 55.2
BcaC05g25925 Brassica carinata HOM05D000901 ORTHO05D004766 2.1e-60 236.5 212 52.8
Os04g0227500 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 2.1e-60 236.5 198 55.1
AL2G36040 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 3.5e-60 235.7 232 51.7
AT1G20225 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 3.5e-60 235.7 202 55.0
Carub.0001s1975 Capsella rubella HOM05D000901 ORTHO05D004766 3.5e-60 235.7 202 55.4
HPP92_003483 Vanilla planifolia HOM05D000901 ORTHO05D004766 4.6e-60 235.3 209 55.5
C05p18770 Brassica napus HOM05D000901 ORTHO05D004766 7.9e-60 234.6 197 55.3
BolC5t30582H Brassica oleracea HOM05D000901 ORTHO05D004766 1.0e-59 234.2 197 55.3
CARHR020720 Cardamine hirsuta HOM05D000901 ORTHO05D004766 1.0e-59 234.2 218 51.8
PGR083G1908 Punica granatum HOM05D000901 ORTHO05D004766 1.8e-59 233.4 205 53.2
AL1G33070 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 2.3e-59 233.0 202 55.0
Nitab4.5_0010135g0010 Nicotiana tabacum HOM05D000901 ORTHO05D004766 2.3e-59 233.0 212 55.2
HPP92_022203 Vanilla planifolia HOM05D000901 ORTHO05D004766 2.3e-59 233.0 211 55.0
A06p16340 Brassica napus HOM05D000901 ORTHO05D004766 3.0e-59 232.6 198 55.1
Oeu048720.1 Olea europaea HOM05D000901 ORTHO05D004766 3.0e-59 232.6 107 100.0
BraA06t24738Z Brassica rapa HOM05D000901 ORTHO05D004766 3.9e-59 232.3 197 54.8
BcaB07g32030 Brassica carinata HOM05D000901 ORTHO05D004766 5.1e-59 231.9 208 52.4
SEGI_34166 Sequoiadendron giganteum HOM05D000901 ORTHO05D004766 5.1e-59 231.9 202 54.0
HPP92_025437 Vanilla planifolia HOM05D000901 ORTHO05D004766 5.1e-59 231.9 192 57.8
BolC6t40030H Brassica oleracea HOM05D000901 ORTHO05D004766 4.3e-58 228.8 228 51.3
Zm00001eb103900 Zea mays HOM05D000901 ORTHO05D004766 1.6e-57 226.9 209 52.2
BraA07t31683Z Brassica rapa HOM05D000901 ORTHO05D004766 4.8e-57 225.3 229 51.1
Os09g0542200 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 1.2e-55 220.7 200 51.5
Aa31LG7G4620 Aethionema arabicum HOM05D000901 ORTHO05D004766 1.5e-55 220.3 224 48.7
Rhsim06G0013400 Rhododendron simsii HOM05D000901 ORTHO05D004766 6.5e-54 214.9 179 59.8
SGA_v2.0_scaffold292G47381 Striga asiatica HOM05D000901 ORTHO05D004766 8.5e-54 214.5 187 56.1
FAN27G1122 Fragaria x ananassa HOM05D000901 ORTHO05D001160 7.4e-50 201.4 153 62.1
Rhsim07G0249300 Rhododendron simsii HOM05D000901 ORTHO05D004766 7.4e-50 201.4 207 53.6
Actinidia29763 Actinidia chinensis HOM05D000901 ORTHO05D004766 1.1e-48 197.6 234 46.2
SMO137G0357 Selaginella moellendorffii HOM05D000901 ORTHO05D004766 3.1e-48 196.1 195 48.2
Dinv31885 Davidia involucrata HOM05D000901 ORTHO05D001160 1.7e-46 190.3 127 70.1
Psat7g082240 Pisum sativum HOM05D000901 ORTHO05D004766 1.1e-42 177.6 137 59.1
MBI05_g08641_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 4.4e-42 175.6 145 60.0
Thhalv10010046m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 4.8e-41 172.2 172 51.2
Lj2g0002110 Lotus japonicus HOM05D000901 ORTHO05D004766 1.9e-37 160.2 153 52.3
MBI05_g19938_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 2.5e-37 159.8 114 65.8
MSTRG.25272 Avicennia marina HOM05D000901 ORTHO05D004766 3.2e-37 159.5 126 63.5
Mapoly0103s0033 Marchantia polymorpha HOM05D000901 ORTHO05D004766 7.2e-37 158.3 210 40.5
Pp3c23_11410 Physcomitrium patens HOM05D000901 ORTHO05D004766 2.1e-36 156.8 213 37.1
BolC1t01801H Brassica oleracea HOM05D000901 ORTHO05D004766 6.3e-33 145.2 111 64.0
Zm00001eb419520 Zea mays HOM05D000901 ORTHO05D004766 1.8e-32 143.7 116 54.3
FAN15G2950 Fragaria x ananassa HOM05D000901 ORTHO05D001160 5.3e-32 142.1 153 48.4
MBI05_g47803_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 5.3e-32 142.1 149 50.3
Haze_22688 Corylus avellana HOM05D000901 ORTHO05D004766 3.6e-28 129.4 112 56.2
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 1.4e-27 127.5 103 55.3
BcaC01g02788 Brassica carinata HOM05D000901 ORTHO05D004766 2.0e-26 123.6 110 51.8
C03p50790 Brassica napus HOM05D000901 ORTHO05D004766 2.0e-26 123.6 110 51.8
Eucgr.L01283 Eucalyptus grandis HOM05D000901 ORTHO05D004766 5.7e-26 122.1 116 51.7
BolC6t40031H Brassica oleracea HOM05D000901 ORTHO05D004766 7.0e-24 115.2 132 43.9
C07p15020 Brassica napus HOM05D000901 ORTHO05D004766 1.6e-23 114.0 101 52.5
AUR62036699 Chenopodium quinoa HOM05D000901 ORTHO05D004766 1.6e-23 114.0 106 51.9
AagrBONN_evm.TU.Sc2ySwM_228.1931 Anthoceros agrestis HOM05D000901 ORTHO05D004766 2.7e-23 113.2 149 38.3
CBR_g10910 Chara braunii HOM05D000901 ORTHO05D004766 1.7e-22 110.5 218 32.6
BcaC09g50963 Brassica carinata HOM05D000901 ORTHO05D004766 3.8e-22 109.4 87 58.6
Haze_22689 Corylus avellana HOM05D000901 ORTHO05D004766 5.5e-21 105.5 120 48.3
CiPaw.07G144400 Carya illinoinensis HOM05D000901 ORTHO05D004766 8.0e-20 101.7 84 54.8
BolC6t37476H Brassica oleracea HOM05D000901 ORTHO05D004766 3.0e-19 99.8 84 53.6
C03p60410 Brassica napus HOM05D000901 ORTHO05D004766 3.4e-18 96.3 85 51.8
Ciclev10027478m.g Citrus clementina HOM05D000901 ORTHO05D004766 7.5e-18 95.1 86 52.3
BolC3t18302H Brassica oleracea HOM05D000901 ORTHO05D004766 8.3e-17 91.7 77 53.2
Rhsim07G0249200 Rhododendron simsii HOM05D000901 ORTHO05D004766 1.4e-16 90.9 71 60.6
BcaC09g50962 Brassica carinata HOM05D000901 ORTHO05D004766 7.7e-15 85.1 61 60.7
Eucgr.H01097 Eucalyptus grandis HOM05D000901 ORTHO05D004766 3.4e-10 69.7 63 50.8
CDE02G3279 Ceratophyllum demersum HOM05D000901 ORTHO05D128872 4.1e-08 62.8 38 68.4


User provided reference genes

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