Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048647.1 Olea europaea HOM05D004383 ORTHO05D005050 1.1e-33 146.0 71 100.0
Oeu010290.1 Olea europaea HOM05D004383 ORTHO05D005050 9.2e-28 126.3 62 95.2
Migut.E01443 Erythranthe guttata HOM05D004383 ORTHO05D005050 1.2e-24 115.9 62 88.7
Cc00_g24580 Coffea canephora HOM05D004383 ORTHO05D005050 2.8e-24 114.8 62 85.5
Migut.A00383 Erythranthe guttata HOM05D004383 ORTHO05D005050 2.8e-24 114.8 62 88.7
SalBow8G1520 Salvia bowleyana HOM05D004383 ORTHO05D005050 2.8e-24 114.8 62 90.3
MSTRG.13961 Avicennia marina HOM05D004383 ORTHO05D005050 3.6e-24 114.4 62 88.7
SGA_v2.0_scaffold4G02162 Striga asiatica HOM05D004383 ORTHO05D005050 6.2e-24 113.6 62 88.7
Potri.006G266300 Populus trichocarpa HOM05D004383 ORTHO05D005050 1.1e-23 112.8 62 87.1
Manes.16G131700 Manihot esculenta HOM05D004383 ORTHO05D005050 1.4e-23 112.5 62 85.5
Sabra18G0020200 Salix brachista HOM05D004383 ORTHO05D005050 2.3e-23 111.7 62 85.5
unitig_32.g11121 Utricularia gibba HOM05D004383 ORTHO05D005050 2.3e-23 111.7 62 88.7
Gohir.D06G105600 Gossypium hirsutum HOM05D004383 ORTHO05D005050 3.1e-23 111.3 62 83.9
Oeu021906.1 Olea europaea HOM05D004383 ORTHO05D005050 4.0e-23 110.9 62 83.9
Thecc.09G012700 Theobroma cacao HOM05D004383 ORTHO05D005050 4.0e-23 110.9 62 83.9
COL.COLO4_18979 Corchorus olitorius HOM05D002641 ORTHO05D005050 5.2e-23 110.5 62 83.9
Sabra06G0208900 Salix brachista HOM05D004383 ORTHO05D005050 5.2e-23 110.5 62 85.5
SGA_v2.0_scaffold169G38599 Striga asiatica HOM05D004383 ORTHO05D005050 5.2e-23 110.5 62 85.5
Gorai.010G120200 Gossypium raimondii HOM05D004383 ORTHO05D005050 6.8e-23 110.2 62 82.3
Potri.018G016800 Populus trichocarpa HOM05D004383 ORTHO05D005050 6.8e-23 110.2 62 83.9
Gorai.009G064600 Gossypium raimondii HOM05D004383 ORTHO05D005050 1.2e-22 109.4 62 80.6
Manes.03G007300 Manihot esculenta HOM05D004383 ORTHO05D005050 1.2e-22 109.4 62 82.3
Cpa.g.sc148.37 Carica papaya HOM05D004383 ORTHO05D005050 3.4e-22 107.8 62 80.6
Duzib168G1681 Durio zibethinus HOM05D004383 ORTHO05D005050 3.4e-22 107.8 62 80.6
Duzib187G0841 Durio zibethinus HOM05D004383 ORTHO05D005050 4.4e-22 107.5 62 80.6
Gohir.A05G061400 Gossypium hirsutum HOM05D004383 ORTHO05D005050 4.4e-22 107.5 62 79.0
CAN.G285.20 Capsicum annuum HOM05D004383 ORTHO05D005050 9.8e-22 106.3 62 82.3
Haze_21384 Corylus avellana HOM05D004383 ORTHO05D005050 9.8e-22 106.3 62 79.0
Peaxi162Scf00045g01943 Petunia axillaris HOM05D004383 ORTHO05D005050 9.8e-22 106.3 62 79.0
TWI32G1179 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 9.8e-22 106.3 62 80.6
Eucgr.C04036 Eucalyptus grandis HOM05D004383 ORTHO05D005050 1.3e-21 105.9 62 79.0
Atru.chr7.2584 Acer truncatum HOM05D004383 ORTHO05D005050 2.2e-21 105.1 62 79.0
PGR044G2662 Punica granatum HOM05D004383 ORTHO05D005050 2.2e-21 105.1 62 79.0
Gohir.D05G063900 Gossypium hirsutum HOM05D004383 ORTHO05D005050 2.9e-21 104.8 62 77.4
Sed0012000 Sechium edule HOM05D004383 ORTHO05D005050 2.9e-21 104.8 62 75.8
Solyc08g006650.3 Solanum lycopersicum HOM05D004383 ORTHO05D005050 2.9e-21 104.8 62 79.0
AUR62024788 Chenopodium quinoa HOM05D004383 ORTHO05D005050 3.7e-21 104.4 62 77.4
Ciclev10009603m.g Citrus clementina HOM05D004383 ORTHO05D005050 3.7e-21 104.4 62 77.4
CiPaw.07G231900 Carya illinoinensis HOM05D004383 ORTHO05D005050 4.9e-21 104.0 62 77.4
MELO3C016948.2 Cucumis melo HOM05D004383 ORTHO05D005050 4.9e-21 104.0 62 75.8
Nitab4.5_0000264g0060 Nicotiana tabacum HOM05D004383 ORTHO05D005050 4.9e-21 104.0 62 79.0
Lsat_1_v5_gn_8_16540 Lactuca sativa HOM05D004383 ORTHO05D005050 6.4e-21 103.6 62 79.0
Sopen08g002600 Solanum pennellii HOM05D004383 ORTHO05D005050 6.4e-21 103.6 62 79.0
PGSC0003DMG400026285 Solanum tuberosum HOM05D004383 ORTHO05D005050 6.4e-21 103.6 62 79.0
AUR62032433 Chenopodium quinoa HOM05D004383 ORTHO05D005050 8.3e-21 103.2 62 75.8
Aa31LG3G16320 Aethionema arabicum HOM05D004383 ORTHO05D005050 1.4e-20 102.4 62 77.4
arahy.Tifrunner.gnm1.ann1.W5C21C Arachis hypogaea HOM05D004383 ORTHO05D005050 1.4e-20 102.4 63 77.8
ClCG05G016150 Citrullus lanatus HOM05D004383 ORTHO05D005050 1.4e-20 102.4 62 75.8
Ah.12g060630 Amaranthus hybridus HOM05D004383 ORTHO05D005050 1.9e-20 102.1 62 74.2
CsaV3_4G036420 Cucumis sativus L. HOM05D004383 ORTHO05D005050 2.4e-20 101.7 62 74.2
Nitab4.5_0001362g0040 Nicotiana tabacum HOM05D004383 ORTHO05D005050 2.4e-20 101.7 62 75.8
THA.LOC104799028 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 2.4e-20 101.7 62 79.0
THA.LOC104824960 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 2.4e-20 101.7 62 79.0
arahy.Tifrunner.gnm1.ann1.S5PPFL Arachis hypogaea HOM05D004383 ORTHO05D005050 3.2e-20 101.3 63 76.2
CSS0047262 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 3.2e-20 101.3 62 75.8
ECA238G1890 Erigeron canadensis HOM05D004383 ORTHO05D005050 3.2e-20 101.3 62 75.8
QL02p018464 Quercus lobata HOM05D004383 ORTHO05D005050 3.2e-20 101.3 62 75.8
Dinv10290 Davidia involucrata HOM05D004383 ORTHO05D005050 4.1e-20 100.9 62 79.0
Carub.0006s0928 Capsella rubella HOM05D004383 ORTHO05D005050 5.4e-20 100.5 62 79.0
FAN16G3501 Fragaria x ananassa HOM05D004383 ORTHO05D005050 5.4e-20 100.5 62 74.2
FAN21G1236 Fragaria x ananassa HOM05D004383 ORTHO05D005050 5.4e-20 100.5 62 74.2
Hma1.2p1_0355F.1_g133920 Hydrangea macrophylla HOM05D004383 ORTHO05D005050 5.4e-20 100.5 62 77.4
MD15G1042900 Malus domestica HOM05D004383 ORTHO05D005050 5.4e-20 100.5 62 75.8
Sed0009310 Sechium edule HOM05D004383 ORTHO05D005050 5.4e-20 100.5 62 72.6
arahy.Tifrunner.gnm1.ann1.76P32W Arachis hypogaea HOM05D004383 ORTHO05D005050 7.0e-20 100.1 63 76.2
arahy.Tifrunner.gnm1.ann1.90HH72 Arachis hypogaea HOM05D004383 ORTHO05D005050 7.0e-20 100.1 63 76.2
CiPaw.08G004800 Carya illinoinensis HOM05D004383 ORTHO05D005050 7.0e-20 100.1 62 74.2
Dinv01903 Davidia involucrata HOM05D004383 ORTHO05D005050 7.0e-20 100.1 62 77.4
BcaB01g06278 Brassica carinata HOM05D004383 ORTHO05D005050 9.2e-20 99.8 62 77.4
CANSAT64G0435 Cannabis sativa HOM05D004383 ORTHO05D005050 9.2e-20 99.8 62 72.6
Thhalv10014802m.g Eutrema salsugineum HOM05D004383 ORTHO05D005050 9.2e-20 99.8 62 77.4
Prupe.1G396200 Prunus persica HOM05D004383 ORTHO05D005050 9.2e-20 99.8 62 72.6
Sp6g32680 Schrenkiella parvula HOM05D004383 ORTHO05D005050 9.2e-20 99.8 62 77.4
EL10Ac2g02480 Beta vulgaris HOM05D004383 ORTHO05D005050 1.6e-19 99.0 62 74.2
CARHR202520 Cardamine hirsuta HOM05D004383 ORTHO05D005050 1.6e-19 99.0 62 77.4
FvH4_3g24420 Fragaria vesca HOM05D004383 ORTHO05D005050 1.6e-19 99.0 62 72.6
TWI34G1410 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 1.6e-19 99.0 62 75.8
BcaB05g21506 Brassica carinata HOM05D004383 ORTHO05D005050 2.1e-19 98.6 62 75.8
Lj7A737G42 Lonicera japonica HOM05D004383 ORTHO05D005050 2.1e-19 98.6 62 77.4
Hund25610 Selenicereus undatus HOM05D004383 ORTHO05D005050 2.1e-19 98.6 63 74.6
GSVIVG01035992001 Vitis vinifera HOM05D004383 ORTHO05D005050 2.1e-19 98.6 62 77.4
AL6G21360 Arabidopsis lyrata HOM05D004383 ORTHO05D005050 2.7e-19 98.2 62 77.4
AT5G10780 Arabidopsis thaliana HOM05D004383 ORTHO05D005050 2.7e-19 98.2 62 77.4
Sc23g0006160 Simmondsia chinensis HOM05D004383 ORTHO05D005050 2.7e-19 98.2 62 79.0
BcaB01g05499 Brassica carinata HOM05D004383 ORTHO05D005050 3.5e-19 97.8 62 75.8
BcaC03g13332 Brassica carinata HOM05D004383 ORTHO05D005050 3.5e-19 97.8 62 75.8
A02p00660 Brassica napus HOM05D004383 ORTHO05D005050 3.5e-19 97.8 62 75.8
C02p04660 Brassica napus HOM05D004383 ORTHO05D005050 3.5e-19 97.8 62 75.8
BolC2t06425H Brassica oleracea HOM05D004383 ORTHO05D003478 3.5e-19 97.8 62 75.8
RcHm_v2.0_Chr6g0299241 Rosa chinensis HOM05D004383 ORTHO05D005050 3.5e-19 97.8 62 71.0
A03p04760 Brassica napus HOM05D004383 ORTHO05D005050 4.6e-19 97.4 62 75.8
BraA03t09816Z Brassica rapa HOM05D004383 ORTHO05D005050 4.6e-19 97.4 62 75.8
vmacro11269 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 4.6e-19 97.4 62 74.2
CSS0025027 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 6.0e-19 97.1 62 75.8
BraA02t05050Z Brassica rapa HOM05D004383 ORTHO05D005050 1.0e-18 96.3 62 74.2
DCAR_003054 Daucus carota HOM05D004383 ORTHO05D005050 1.3e-18 95.9 62 75.8
vmacro05117 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 1.7e-18 95.5 62 75.8
BolC3t13057H Brassica oleracea HOM05D004383 ORTHO05D005050 2.3e-18 95.1 62 74.2
Glyma.17G222100 Glycine max HOM05D004383 ORTHO05D005050 2.3e-18 95.1 63 74.6
Ca_13075_v3 Cicer arietinum L. HOM05D004383 ORTHO05D005050 3.0e-18 94.7 63 76.2
CSS0026414 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 3.9e-18 94.4 62 72.6
VMungo0647G1739 Vigna mungo HOM05D004383 ORTHO05D005050 3.9e-18 94.4 63 74.6
Nn1g03128 Nelumbo nucifera HOM05D004383 ORTHO05D005050 5.1e-18 94.0 62 74.2
Actinidia14139 Actinidia chinensis HOM05D004383 ORTHO05D005050 8.6e-18 93.2 62 74.2
Medtr1g013660 Medicago truncatula HOM05D004383 ORTHO05D005050 8.6e-18 93.2 63 74.6
Phvul.001G042400 Phaseolus vulgaris HOM05D004383 ORTHO05D005050 8.6e-18 93.2 63 73.0
Glyma.14G103800 Glycine max HOM05D004383 ORTHO05D005050 1.1e-17 92.8 63 73.0
Actinidia10531 Actinidia chinensis HOM05D004383 ORTHO05D005050 1.9e-17 92.0 62 72.6
Nn3g19885 Nelumbo nucifera HOM05D004383 ORTHO05D005050 3.3e-17 91.3 62 72.6
HanXRQChr07g0201211 Helianthus annuus HOM05D004383 ORTHO05D005050 1.2e-16 89.4 62 72.6
Lj6g0009294 Lotus japonicus HOM05D004383 ORTHO05D005050 1.2e-16 89.4 64 68.8
TPR.G38877 Trifolium pratense HOM05D004383 ORTHO05D005050 2.1e-16 88.6 63 69.8
TAR625G0171 Trochodendron aralioides HOM05D004383 ORTHO05D005050 2.8e-16 88.2 62 67.7
TAR625G1552 Trochodendron aralioides HOM05D004383 ORTHO05D005050 2.8e-16 88.2 62 67.7
HanXRQChr12g0370101 Helianthus annuus HOM05D004383 ORTHO05D005050 3.6e-16 87.8 55 74.5
TAR383G0062 Trochodendron aralioides HOM05D004383 ORTHO05D005050 4.7e-16 87.4 62 67.7
ECA233G1452 Erigeron canadensis HOM05D004383 ORTHO05D005050 8.1e-16 86.7 55 72.7
Psat6g025120 Pisum sativum HOM05D004383 ORTHO05D005050 1.4e-15 85.9 63 68.3
Lalb_Chr24g0401921 Lupinus albus HOM05D004383 ORTHO05D005050 2.3e-15 85.1 64 65.6
C03p05470 Brassica napus HOM05D004383 ORTHO05D005050 3.1e-15 84.7 55 72.7
Rhsim07G0166500 Rhododendron simsii HOM05D004383 ORTHO05D005050 5.2e-15 84.0 84 54.8
Aqoxy7G03322 Aquilegia oxysepala HOM05D004383 ORTHO05D005050 4.4e-14 80.9 65 64.6
MD08G1052600 Malus domestica HOM05D004383 ORTHO05D005050 2.2e-13 78.6 70 57.1
FvH4_6g27370 Fragaria vesca HOM05D004383 ORTHO05D005050 2.9e-13 78.2 55 65.5
FAN02G2967 Fragaria x ananassa HOM05D004383 ORTHO05D005050 2.9e-13 78.2 55 65.5
FAN05G0819 Fragaria x ananassa HOM05D004383 ORTHO05D005050 2.9e-13 78.2 55 65.5
MBI14_g31383_MAGBIO Magnolia biondii HOM05D004383 ORTHO05D005050 6.4e-13 77.0 63 61.9
FAN14G2933 Fragaria x ananassa HOM05D004383 ORTHO05D005050 8.3e-13 76.6 56 64.3
PSO017G0706 Papaver somniferum HOM05D004383 ORTHO05D005050 1.2e-11 72.8 65 56.9
PSO170G1218 Papaver somniferum HOM05D004383 ORTHO05D005050 1.2e-11 72.8 65 56.9
Os03g0360500 Oryza sativa ssp. japonica HOM05D004383 ORTHO05D005050 7.8e-11 70.1 63 58.7
Zm00001eb394360 Zea mays HOM05D004383 ORTHO05D005050 1.7e-10 68.9 62 58.1
CDE05G2494 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 3.9e-10 67.8 62 58.1
ATR0580G398 Amborella trichopoda HOM05D004383 ORTHO05D005050 5.1e-10 67.4 62 56.5
CDE02G0236 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 8.6e-10 66.6 62 58.1
C03p33160 Brassica napus HOM05D004383 ORTHO05D005050 4.3e-09 64.3 43 74.4
BolC3t15641H Brassica oleracea HOM05D004383 ORTHO05D005050 4.3e-09 64.3 43 74.4
SEGI_36915 Sequoiadendron giganteum HOM05D004383 ORTHO05D005050 4.3e-09 64.3 51 54.9
HPP92_021944 Vanilla planifolia HOM05D004383 ORTHO05D005050 7.3e-09 63.5 65 52.3
Mapoly0039s0015 Marchantia polymorpha HOM05D004383 ORTHO05D005050 6.8e-07 57.0 50 50.0
Pp3c18_15950 Physcomitrium patens HOM05D004383 ORTHO05D005050 1.2e-06 56.2 50 52.0
BcaB07g33518 Brassica carinata HOM05D001184 ORTHO05D005050 1.5e-06 55.8 42 66.7
MD03G1162600 Malus domestica HOM05D004383 ORTHO05D005050 5.8e-06 53.9 42 61.9


User provided reference genes

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