Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 8.5e-90 333.6 160 100.0
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 6.6e-50 201.1 157 61.1
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 3.6e-48 195.3 157 59.9
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 4.4e-46 188.3 157 58.0
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 2.9e-45 185.7 154 58.4
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 3.8e-45 185.3 154 58.4
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 1.4e-44 183.3 151 61.6
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 7.1e-44 181.0 150 54.0
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 8.7e-42 174.1 150 54.0
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 1.1e-41 173.7 150 52.0
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 3.3e-41 172.2 150 51.3
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 1.2e-40 170.2 151 51.7
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 3.6e-40 168.7 149 53.0
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 1.1e-39 167.2 146 54.8
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 3.1e-39 165.6 157 50.3
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 4.0e-39 165.2 150 54.0
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 1.2e-38 163.7 150 49.3
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 1.5e-38 163.3 150 48.7
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 3.4e-38 162.2 144 52.1
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 4.4e-38 161.8 153 48.4
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 7.6e-38 161.0 151 51.0
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 1.7e-37 159.8 149 47.0
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 6.4e-37 157.9 145 51.7
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 8.4e-37 157.5 150 51.3
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 1.4e-36 156.8 147 53.7
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 1.4e-36 156.8 145 49.7
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 1.9e-36 156.4 149 46.3
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 1.9e-36 156.4 157 45.9
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 4.2e-36 155.2 148 51.4
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 4.2e-36 155.2 150 48.7
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 1.2e-35 153.7 150 48.0
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 6.0e-35 151.4 150 45.3
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 6.0e-35 151.4 153 49.7
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 1.3e-34 150.2 155 49.7
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 1.7e-34 149.8 143 46.9
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 3.0e-34 149.1 138 50.0
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 3.9e-34 148.7 144 49.3
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 3.9e-34 148.7 148 50.7
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 5.1e-34 148.3 150 49.3
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 6.6e-34 147.9 144 49.3
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 6.6e-34 147.9 150 46.7
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 6.6e-34 147.9 145 50.3
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 1.1e-33 147.1 157 46.5
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.9e-33 146.4 147 50.3
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 2.5e-33 146.0 144 48.6
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 3.3e-33 145.6 141 50.4
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 3.3e-33 145.6 153 47.7
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 5.6e-33 144.8 149 46.3
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 9.6e-33 144.1 156 44.2
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.6e-32 143.3 147 48.3
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 1.6e-32 143.3 147 48.3
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 1.1e-31 140.6 145 44.1
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 1.4e-31 140.2 146 46.6
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 1.8e-31 139.8 154 46.1
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 4.0e-31 138.7 145 42.8
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 6.9e-31 137.9 147 44.9
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 2.6e-30 136.0 153 47.1
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 3.8e-29 132.1 144 46.5
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 7.1e-28 127.9 152 42.1
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 7.9e-27 124.4 144 44.4
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 7.9e-27 124.4 146 40.4
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 7.4e-25 117.9 123 47.2
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 1.6e-24 116.7 132 37.9
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 3.7e-24 115.5 88 61.4
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 2.4e-23 112.8 156 41.7
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 3.2e-20 102.4 132 34.1
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 5.1e-18 95.1 71 67.6
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 6.7e-18 94.7 114 41.2
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 1.9e-17 93.2 143 35.0
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 4.3e-17 92.0 127 39.4
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 9.6e-17 90.9 85 49.4
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 1.6e-16 90.1 89 50.6
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 6.9e-15 84.7 139 33.1
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 1.5e-14 83.6 154 31.2
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 7.6e-14 81.3 128 32.0
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 1.0e-13 80.9 139 31.7
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 1.0e-13 80.9 133 33.1
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 1.3e-13 80.5 146 31.5
AT1G49510 Arabidopsis thaliana HOM05D007054 ORTHO05D008888 2.2e-13 79.7 128 32.0
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 2.2e-13 79.7 133 32.3
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 2.2e-13 79.7 133 32.3
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 2.2e-13 79.7 133 31.6
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 3.8e-13 79.0 135 31.9
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 4.9e-13 78.6 133 34.6
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 4.9e-13 78.6 133 30.8
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 4.9e-13 78.6 134 31.3
AL1G56860 Arabidopsis lyrata HOM05D007054 ORTHO05D008888 6.5e-13 78.2 128 32.0
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 6.5e-13 78.2 128 32.8
Sc26g0004390 Simmondsia chinensis HOM05D007054 ORTHO05D008888 6.5e-13 78.2 130 31.5
Carub.0001s3870 Capsella rubella HOM05D007054 ORTHO05D008888 8.4e-13 77.8 128 31.2
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 8.4e-13 77.8 134 33.6
MBI16_g08580_MAGBIO Magnolia biondii HOM05D007054 ORTHO05D008888 8.4e-13 77.8 139 32.4
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 1.4e-12 77.0 139 31.7
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 1.9e-12 76.6 158 30.4
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 1.9e-12 76.6 133 31.6
THA.LOC104798802 Tarenaya hassleriana HOM05D007054 ORTHO05D008888 1.9e-12 76.6 128 31.2
TAR625G1358 Trochodendron aralioides HOM05D007054 ORTHO05D008888 1.9e-12 76.6 134 32.8
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 2.5e-12 76.3 133 32.3
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 5.5e-12 75.1 139 30.9
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 7.1e-12 74.7 143 30.1
Sp1g36370 Schrenkiella parvula HOM05D007054 ORTHO05D008888 7.1e-12 74.7 128 31.2
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 9.3e-12 74.3 139 29.5
Thhalv10011746m.g Eutrema salsugineum HOM05D007054 ORTHO05D008888 9.3e-12 74.3 128 30.5
A05p20580 Brassica napus HOM05D007054 ORTHO05D008888 1.2e-11 73.9 128 30.5
BraA05t20968Z Brassica rapa HOM05D007054 ORTHO05D008888 1.2e-11 73.9 128 30.5
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 1.2e-11 73.9 129 31.8
BcaC05g27487 Brassica carinata HOM05D007054 ORTHO05D008888 1.6e-11 73.6 128 30.5
C05p34530 Brassica napus HOM05D007054 ORTHO05D008888 1.6e-11 73.6 128 30.5
AUR62003054 Chenopodium quinoa HOM05D007054 ORTHO05D008888 2.7e-11 72.8 134 28.4
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 2.7e-11 72.8 139 30.9
AUR62007867 Chenopodium quinoa HOM05D007054 ORTHO05D008888 3.5e-11 72.4 134 29.1
Thecc.02G095100 Theobroma cacao HOM05D007054 ORTHO05D008888 3.5e-11 72.4 133 30.8
TAR381G0282 Trochodendron aralioides HOM05D007054 ORTHO05D008888 4.6e-11 72.0 133 33.1
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 6.1e-11 71.6 129 31.0
EL10Ac6g14668 Beta vulgaris HOM05D007054 ORTHO05D008888 6.1e-11 71.6 134 29.9
CAN.G322.40 Capsicum annuum HOM05D007054 ORTHO05D008888 7.9e-11 71.2 139 30.9
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 7.9e-11 71.2 133 28.6
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 7.9e-11 71.2 134 29.1
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 7.9e-11 71.2 134 29.1
Lj2g0019135 Lotus japonicus HOM05D007054 ORTHO05D008888 7.9e-11 71.2 133 27.1
BolC5t32180H Brassica oleracea HOM05D007054 ORTHO05D008888 1.3e-10 70.5 128 29.7
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 1.3e-10 70.5 139 29.5
BcaB02g11085 Brassica carinata HOM05D007054 ORTHO05D008888 1.8e-10 70.1 128 28.9
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 2.3e-10 69.7 139 28.8
TWI79G0983 Tripterygium wilfordii HOM05D007054 ORTHO05D008888 2.3e-10 69.7 128 31.2
Aa31LG10G4480 Aethionema arabicum HOM05D007054 ORTHO05D008888 3.0e-10 69.3 127 29.9
MD15G1063400 Malus domestica HOM05D008077 ORTHO05D010221 3.0e-10 69.3 82 47.6
Potri.004G145600 Populus trichocarpa HOM05D007054 ORTHO05D008888 3.0e-10 69.3 134 31.3
Nitab4.5_0001401g0040 Nicotiana tabacum HOM05D007054 ORTHO05D008888 8.7e-10 67.8 139 29.5
Sabra04G0096600 Salix brachista HOM05D007054 ORTHO05D008888 8.7e-10 67.8 140 30.7
Aa31LG8G5880 Aethionema arabicum HOM05D007054 ORTHO05D008888 1.1e-09 67.4 128 28.1
Nitab4.5_0003726g0060 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.1e-09 67.4 139 29.5
ECA234G0688 Erigeron canadensis HOM05D007054 ORTHO05D008888 1.5e-09 67.0 133 27.8
SalBow3G3466 Salvia bowleyana HOM05D007054 ORTHO05D008888 3.3e-09 65.9 133 27.8
Peaxi162Scf00016g01532 Petunia axillaris HOM05D007054 ORTHO05D008888 4.3e-09 65.5 139 28.8
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 5.7e-09 65.1 128 28.1
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 7.4e-09 64.7 134 29.1
Lsat_1_v5_gn_5_117740 Lactuca sativa HOM05D007054 ORTHO05D008888 2.2e-08 63.2 139 26.6
Solyc01g108650.3 Solanum lycopersicum HOM05D007054 ORTHO05D008888 2.2e-08 63.2 139 28.1
Sopen01g050870 Solanum pennellii HOM05D007054 ORTHO05D008888 2.2e-08 63.2 139 28.1
PGSC0003DMG400025902 Solanum tuberosum HOM05D007054 ORTHO05D008888 8.2e-08 61.2 139 27.3
FAN27G0716 Fragaria x ananassa HOM05D007054 ORTHO05D008888 2.4e-07 59.7 138 26.8


User provided reference genes

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