Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 7.7e-100 367.1 177 100.0
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 4.3e-50 201.8 172 61.0
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 2.8e-49 199.1 172 59.9
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 2.8e-49 199.1 172 62.2
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 2.0e-47 193.0 192 56.2
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 3.4e-47 192.2 165 60.6
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 3.4e-47 192.2 165 60.6
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 3.4e-47 192.2 172 59.3
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 3.4e-47 192.2 167 59.3
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 9.9e-47 190.7 190 56.8
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 1.3e-46 190.3 165 60.0
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 1.7e-46 189.9 217 46.5
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 2.2e-46 189.5 172 56.4
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 2.9e-46 189.1 201 53.7
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 2.9e-46 189.1 172 58.1
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 2.9e-46 189.1 171 57.9
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 6.4e-46 188.0 172 57.6
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 8.4e-46 187.6 172 55.8
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 8.4e-46 187.6 172 55.8
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 1.1e-45 187.2 166 58.4
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 1.4e-45 186.8 198 53.0
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 1.9e-45 186.4 126 72.2
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 1.9e-45 186.4 161 59.6
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 2.4e-45 186.0 200 51.5
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 4.2e-45 185.3 184 53.3
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 5.4e-45 184.9 165 58.8
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 5.4e-45 184.9 172 56.4
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 7.1e-45 184.5 166 57.2
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 7.1e-45 184.5 165 56.4
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 7.1e-45 184.5 167 57.5
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 7.1e-45 184.5 172 57.6
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 9.3e-45 184.1 165 58.2
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 1.2e-44 183.7 172 57.0
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.6e-44 183.3 165 56.4
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.6e-44 183.3 165 56.4
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 1.6e-44 183.3 165 56.4
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 2.7e-44 182.6 172 55.8
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 2.7e-44 182.6 172 55.8
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 2.7e-44 182.6 172 55.8
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 2.7e-44 182.6 172 55.8
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 3.5e-44 182.2 195 52.3
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 3.5e-44 182.2 195 51.8
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 6.0e-44 181.4 194 50.0
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 6.0e-44 181.4 167 56.3
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 7.8e-44 181.0 191 52.9
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 1.3e-43 180.3 165 57.6
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 1.7e-43 179.9 172 54.1
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 1.7e-43 179.9 165 55.8
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 2.3e-43 179.5 167 55.1
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 2.3e-43 179.5 172 54.7
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 3.0e-43 179.1 154 58.4
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 3.0e-43 179.1 184 51.6
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 3.9e-43 178.7 165 56.4
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 5.1e-43 178.3 166 54.8
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 6.6e-43 177.9 167 55.7
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 6.6e-43 177.9 179 54.2
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 6.6e-43 177.9 167 56.3
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.1e-42 177.2 164 54.9
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.5e-42 176.8 165 56.4
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 2.5e-42 176.0 165 55.2
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 4.3e-42 175.3 172 53.5
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 4.3e-42 175.3 188 51.6
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 5.6e-42 174.9 167 54.5
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 9.6e-42 174.1 165 54.5
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 2.1e-41 172.9 164 55.5
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 2.1e-41 172.9 167 54.5
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 2.8e-41 172.6 167 54.5
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 8.1e-41 171.0 167 53.9
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 8.1e-41 171.0 164 55.5
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 8.1e-41 171.0 173 54.3
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 1.8e-40 169.9 166 54.2
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 3.1e-40 169.1 169 52.7
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 4.0e-40 168.7 164 52.4
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 4.0e-40 168.7 167 54.5
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 5.3e-40 168.3 164 54.3
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 1.2e-39 167.2 164 54.3
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 1.2e-39 167.2 200 46.5
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 1.5e-39 166.8 166 52.4
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 5.8e-39 164.9 207 44.9
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 2.9e-38 162.5 164 52.4
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 3.8e-38 162.2 219 42.0
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 1.4e-37 160.2 165 52.7
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 2.4e-37 159.5 165 53.3
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 9.3e-37 157.5 166 52.4
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 2.1e-36 156.4 156 53.8
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 7.9e-36 154.5 156 54.5
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 1.9e-34 149.8 129 60.5
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 4.3e-34 148.7 161 50.9
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 5.6e-34 148.3 156 53.2
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 5.6e-34 148.3 211 42.7
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 7.3e-34 147.9 164 49.4
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 1.3e-33 147.1 138 56.5
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 9.9e-31 137.5 106 65.1
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 1.7e-30 136.7 74 82.4
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.4e-29 133.7 108 61.1
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 3.2e-29 132.5 148 51.4
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 3.9e-27 125.6 102 59.8
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 1.4e-21 107.1 151 44.4
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.9e-21 106.7 189 34.9
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 9.3e-21 104.4 190 33.7
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.7e-20 102.8 92 53.3
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 3.0e-19 99.4 96 50.0
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 1.3e-17 94.0 56 71.4
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 8.2e-17 91.3 54 77.8
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.7e-14 83.6 142 39.4
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 5.5e-13 78.6 51 70.6
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 1.6e-12 77.0 74 50.0
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 5.1e-11 72.0 48 66.7
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 1.5e-10 70.5 75 44.0
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 2.5e-10 69.7 48 60.4
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.2e-09 66.6 41 68.3
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 1.2e-07 60.8 54 55.6
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 1.0e-06 57.8 56 50.0
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 2.9e-06 56.2 81 35.8


User provided reference genes

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