Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 4.8e-73 277.7 139 100.0
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 1.3e-54 216.5 130 79.2
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 5.0e-54 214.5 130 81.5
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 7.2e-53 210.7 133 77.4
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 2.1e-52 209.1 132 74.2
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 3.6e-52 208.4 129 79.8
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 3.6e-52 208.4 129 79.8
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 6.1e-52 207.6 133 76.7
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 1.0e-51 206.8 132 76.5
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 2.3e-51 205.7 133 75.2
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 2.3e-51 205.7 132 76.5
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 2.3e-51 205.7 133 76.7
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 3.0e-51 205.3 133 74.4
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 3.0e-51 205.3 134 76.1
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 5.2e-51 204.5 132 76.5
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 6.8e-51 204.1 133 73.7
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 8.9e-51 203.8 132 72.7
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 8.9e-51 203.8 133 75.2
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 8.9e-51 203.8 133 75.2
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 8.9e-51 203.8 133 77.4
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 8.9e-51 203.8 133 72.9
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 1.2e-50 203.4 132 78.0
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 1.2e-50 203.4 147 72.8
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 1.5e-50 203.0 134 72.4
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 2.0e-50 202.6 132 75.8
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 2.0e-50 202.6 135 74.8
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 2.0e-50 202.6 132 76.5
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 2.0e-50 202.6 133 72.2
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 2.0e-50 202.6 133 78.2
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 3.4e-50 201.8 132 76.5
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 3.4e-50 201.8 133 72.2
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 4.4e-50 201.4 133 72.9
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 5.7e-50 201.1 133 71.4
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 7.5e-50 200.7 133 74.4
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 9.8e-50 200.3 133 71.4
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 9.8e-50 200.3 133 72.2
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 2.2e-49 199.1 132 72.0
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 2.2e-49 199.1 133 72.2
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 2.9e-49 198.7 134 70.9
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 3.7e-49 198.4 133 75.2
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 4.9e-49 198.0 134 72.4
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 6.4e-49 197.6 133 73.7
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 6.4e-49 197.6 133 73.7
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 6.4e-49 197.6 142 69.0
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 1.1e-48 196.8 133 72.9
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 1.4e-48 196.4 132 75.0
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 1.4e-48 196.4 134 71.6
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 1.4e-48 196.4 133 70.7
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 1.4e-48 196.4 128 74.2
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 1.4e-48 196.4 128 74.2
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 1.4e-48 196.4 134 71.6
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 1.8e-48 196.1 132 70.5
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 1.8e-48 196.1 129 72.1
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 2.4e-48 195.7 133 74.4
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 2.4e-48 195.7 133 74.4
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 3.2e-48 195.3 133 72.2
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 3.2e-48 195.3 128 73.4
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 4.1e-48 194.9 132 70.5
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 4.1e-48 194.9 134 69.4
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 4.1e-48 194.9 134 71.6
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 1.2e-47 193.4 136 69.1
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 1.2e-47 193.4 126 73.8
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 2.0e-47 192.6 133 72.9
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 2.0e-47 192.6 136 67.6
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 2.7e-47 192.2 132 74.2
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 2.7e-47 192.2 133 70.7
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 3.5e-47 191.8 134 69.4
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 4.6e-47 191.4 130 73.1
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 5.9e-47 191.0 133 70.7
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 7.8e-47 190.7 130 74.6
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 7.8e-47 190.7 126 73.0
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 1.0e-46 190.3 135 68.1
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 1.3e-46 189.9 147 63.3
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 1.3e-46 189.9 131 71.8
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 1.7e-46 189.5 131 74.0
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 2.3e-46 189.1 144 63.9
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 2.3e-46 189.1 133 72.9
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 3.0e-46 188.7 134 72.4
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 3.0e-46 188.7 134 72.4
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 3.0e-46 188.7 132 69.7
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 4.3e-45 184.9 132 68.9
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 8.0e-44 180.6 120 74.2
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 1.0e-43 180.3 127 70.1
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 1.4e-43 179.9 128 67.2
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 1.5e-42 176.4 113 73.5
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 3.4e-42 175.3 129 69.8
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 4.4e-42 174.9 161 60.9
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 5.8e-42 174.5 126 69.0
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 2.4e-40 169.1 126 67.5
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 4.6e-39 164.9 172 51.2
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 6.0e-39 164.5 155 56.1
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 3.9e-38 161.8 124 65.3
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 1.5e-37 159.8 101 72.3
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 7.3e-37 157.5 93 76.3
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 1.2e-36 156.8 131 64.1
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 2.0e-34 149.4 112 67.0
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 7.5e-34 147.5 92 81.5
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 4.9e-33 144.8 132 58.3
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 1.1e-32 143.7 137 59.9
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 3.2e-32 142.1 99 69.7
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.2e-31 140.2 74 82.4
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 6.0e-31 137.9 151 51.0
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 2.3e-30 136.0 126 58.7
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 1.5e-29 133.3 152 48.0
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 2.1e-28 129.4 100 65.0
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 3.2e-24 115.5 77 77.9
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 1.1e-21 107.1 92 54.3
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 3.3e-21 105.5 135 43.7
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 9.9e-18 94.0 160 38.1
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.1e-11 73.9 63 68.3
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.1e-11 73.9 63 68.3
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 2.9e-09 65.9 60 68.3
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 2.4e-08 62.8 65 60.0
Cre09.g401150 Chlamydomonas reinhardtii HOM05D006936 ORTHO05D008273 2.7e-07 59.3 134 32.8
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 1.3e-06 57.0 44 59.1
Ah.06g185860 Amaranthus hybridus HOM05D006936 ORTHO05D008273 8.7e-06 54.3 37 62.2


User provided reference genes

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