Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048392.1 Olea europaea HOM05D004794 ORTHO05D005875 1.7e-216 755.7 385 100.0
Oeu029170.1 Olea europaea HOM05D004794 ORTHO05D005875 1.6e-166 589.7 385 82.1
Migut.E00392 Erythranthe guttata HOM05D004794 ORTHO05D005875 1.1e-143 513.8 386 72.0
MSTRG.13564 Avicennia marina HOM05D004794 ORTHO05D005875 1.4e-143 513.5 385 70.9
SalBow8G5373 Salvia bowleyana HOM05D004794 ORTHO05D005875 3.3e-140 502.3 385 68.6
SGA_v2.0_scaffold376G50295 Striga asiatica HOM05D004794 ORTHO05D005875 2.8e-139 499.2 381 71.1
Lj3A877T98 Lonicera japonica HOM05D004794 ORTHO05D005875 2.6e-132 476.1 385 67.8
Dinv16165 Davidia involucrata HOM05D004794 ORTHO05D005875 2.8e-131 472.6 387 66.9
vmacro01423 Vaccinium macrocarpon HOM05D004794 ORTHO05D005875 5.3e-130 468.4 385 67.0
Hma1.2p1_0114F.1_g055470 Hydrangea macrophylla HOM05D004794 ORTHO05D005875 7.0e-130 468.0 386 66.6
Nitab4.5_0013146g0030 Nicotiana tabacum HOM05D004794 ORTHO05D005875 1.2e-129 467.2 385 65.2
Nitab4.5_0000350g0140 Nicotiana tabacum HOM05D004794 ORTHO05D005875 1.6e-129 466.8 385 65.5
Solyc05g008530.3 Solanum lycopersicum HOM05D004794 ORTHO05D005875 7.7e-129 464.5 385 66.5
Sopen05g004370 Solanum pennellii HOM05D004794 ORTHO05D005875 1.3e-128 463.8 385 66.5
PGSC0003DMG400030563 Solanum tuberosum HOM05D004794 ORTHO05D005875 5.0e-128 461.8 385 65.5
Nn4g24023 Nelumbo nucifera HOM05D004794 ORTHO05D005875 2.5e-127 459.5 389 66.3
TAR374G0638 Trochodendron aralioides HOM05D004794 ORTHO05D005875 3.6e-126 455.7 367 67.8
PGR102G0643 Punica granatum HOM05D004794 ORTHO05D005875 8.0e-126 454.5 374 67.4
Dinv04904 Davidia involucrata HOM05D004794 ORTHO05D005875 1.4e-125 453.8 387 64.1
CAN.G1489.14 Capsicum annuum HOM05D004794 ORTHO05D005875 3.0e-125 452.6 386 65.0
Sc04g0005890 Simmondsia chinensis HOM05D004794 ORTHO05D005875 1.2e-124 450.7 383 65.5
Peaxi162Scf00205g01022 Petunia axillaris HOM05D004794 ORTHO05D005875 5.7e-124 448.4 385 63.9
Lsat_1_v5_gn_3_54000 Lactuca sativa HOM05D004794 ORTHO05D005875 1.3e-123 447.2 385 62.6
TAR622G1294 Trochodendron aralioides HOM05D004794 ORTHO05D005875 2.8e-123 446.0 332 71.1
Aqoxy5G03876 Aquilegia oxysepala HOM05D004794 ORTHO05D005875 1.8e-122 443.4 391 62.4
Actinidia31991 Actinidia chinensis HOM05D004794 ORTHO05D005875 4.1e-122 442.2 385 64.2
CSS0006530 Camellia sinensis var. sinensis HOM05D004794 ORTHO05D005875 5.4e-122 441.8 385 64.4
CDE06G2233 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 7.0e-122 441.4 337 68.8
GSVIVG01011805001 Vitis vinifera HOM05D004794 ORTHO05D005875 7.0e-122 441.4 386 64.2
Migut.L01019 Erythranthe guttata HOM05D004794 ORTHO05D005875 9.1e-122 441.0 391 64.2
SalBow8G4147 Salvia bowleyana HOM05D004794 ORTHO05D005875 9.1e-122 441.0 420 59.5
Gohir.D12G147200 Gossypium hirsutum HOM05D004794 ORTHO05D005875 2.7e-121 439.5 388 63.7
Gohir.A12G142300 Gossypium hirsutum HOM05D004794 ORTHO05D005875 4.5e-121 438.7 388 63.7
Lj6A750T92 Lonicera japonica HOM05D004794 ORTHO05D005875 5.9e-121 438.3 393 62.8
Gorai.008G158400 Gossypium raimondii HOM05D004794 ORTHO05D005875 7.7e-121 438.0 388 63.4
CDE07G0253 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 1.0e-120 437.6 254 85.4
Cc11_g09270 Coffea canephora HOM05D004794 ORTHO05D005875 1.0e-120 437.6 387 62.8
PSO170G3473 Papaver somniferum HOM05D004794 ORTHO05D005875 1.7e-120 436.8 337 69.1
Atru.chr11.341 Acer truncatum HOM05D004794 ORTHO05D005875 2.3e-120 436.4 380 64.5
Thecc.02G215600 Theobroma cacao HOM05D004794 ORTHO05D005875 3.8e-120 435.6 392 62.2
MBI16_g29821_MAGBIO Magnolia biondii HOM05D004794 ORTHO05D005875 5.0e-120 435.3 250 87.2
Prupe.1G320000 Prunus persica HOM05D004794 ORTHO05D005875 8.6e-120 434.5 330 69.4
CiPaw.05G245300 Carya illinoinensis HOM05D004794 ORTHO05D005875 1.1e-119 434.1 383 64.8
Atru.chr11.334 Acer truncatum HOM05D004794 ORTHO05D005875 1.5e-119 433.7 381 64.3
Glyma.10G268000 Glycine max HOM05D004794 ORTHO05D005875 1.5e-119 433.7 357 67.8
THA.LOC104805049 Tarenaya hassleriana HOM05D004794 ORTHO05D005875 2.5e-119 433.0 256 85.5
Manes.06G063100 Manihot esculenta HOM05D004794 ORTHO05D005875 3.2e-119 432.6 388 61.6
PSO445G0020 Papaver somniferum HOM05D004794 ORTHO05D005875 3.2e-119 432.6 396 62.1
Potri.010G117200 Populus trichocarpa HOM05D004794 ORTHO05D005875 3.2e-119 432.6 254 84.3
ClCG05G022340 Citrullus lanatus HOM05D004794 ORTHO05D005875 5.5e-119 431.8 386 63.0
Glyma.20G123100 Glycine max HOM05D004794 ORTHO05D005875 5.5e-119 431.8 352 68.5
Manes.14G109500 Manihot esculenta HOM05D004794 ORTHO05D005875 5.5e-119 431.8 346 67.6
Eucgr.B02866 Eucalyptus grandis HOM05D004794 ORTHO05D005875 7.2e-119 431.4 254 84.3
HanXRQChr15g0477711 Helianthus annuus HOM05D004794 ORTHO05D005875 7.2e-119 431.4 385 61.3
Ciclev10015744m.g Citrus clementina HOM05D004794 ORTHO05D005875 9.5e-119 431.0 250 86.0
Sabra10G0086800 Salix brachista HOM05D004794 ORTHO05D005875 9.5e-119 431.0 254 83.5
Sabra10G0088400 Salix brachista HOM05D004794 ORTHO05D005875 9.5e-119 431.0 254 83.5
Sed0004857 Sechium edule HOM05D004794 ORTHO05D005875 9.5e-119 431.0 385 62.6
TWI75G0950 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 9.5e-119 431.0 336 69.3
Hund25018 Selenicereus undatus HOM05D004794 ORTHO05D005875 1.2e-118 430.6 386 61.7
ATR0691G049 Amborella trichopoda HOM05D004794 ORTHO05D005875 2.8e-118 429.5 264 81.4
CsaV3_5G034760 Cucumis sativus L. HOM05D004794 ORTHO05D005875 3.6e-118 429.1 386 62.4
HanXRQChr01g0013251 Helianthus annuus HOM05D004794 ORTHO05D005875 3.6e-118 429.1 385 60.3
MELO3C012288.2 Cucumis melo HOM05D004794 ORTHO05D005875 6.1e-118 428.3 386 62.2
CANSAT01G0565 Cannabis sativa HOM05D004794 ORTHO05D005875 8.0e-118 427.9 381 62.7
Lalb_Chr02g0145631 Lupinus albus HOM05D004794 ORTHO05D005875 8.0e-118 427.9 330 67.9
TWI79G0577 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 8.0e-118 427.9 337 69.4
FAN07G1519 Fragaria x ananassa HOM05D004794 ORTHO05D005875 1.4e-117 427.2 329 67.8
RcHm_v2.0_Chr4g0434021 Rosa chinensis HOM05D004794 ORTHO05D005875 1.4e-117 427.2 262 79.8
Cfa015814 Carpinus fangiana HOM05D004794 ORTHO05D005875 1.8e-117 426.8 256 83.2
DCAR_007276 Daucus carota HOM05D004794 ORTHO05D005875 2.3e-117 426.4 262 80.9
EL10Ac6g14275 Beta vulgaris HOM05D004794 ORTHO05D005875 4.0e-117 425.6 385 62.3
Phvul.007G034300 Phaseolus vulgaris HOM05D004794 ORTHO05D005875 4.0e-117 425.6 355 64.5
FAN22G0499 Fragaria x ananassa HOM05D004794 ORTHO05D005875 5.2e-117 425.2 262 80.2
Zm00001eb009240 Zea mays HOM05D004794 ORTHO05D005875 5.2e-117 425.2 255 82.0
FvH4_4g26390 Fragaria vesca HOM05D004794 ORTHO05D005875 6.8e-117 424.9 329 67.5
FAN12G0017 Fragaria x ananassa HOM05D004794 ORTHO05D005875 6.8e-117 424.9 329 67.5
FAN12G0914 Fragaria x ananassa HOM05D004794 ORTHO05D005875 6.8e-117 424.9 329 67.5
Psat6g222720 Pisum sativum HOM05D004794 ORTHO05D005875 8.8e-117 424.5 336 67.6
QL01p003046 Quercus lobata HOM05D004794 ORTHO05D005875 8.8e-117 424.5 339 68.1
MD13G1032500 Malus domestica HOM05D004794 ORTHO05D005875 1.2e-116 424.1 254 81.9
FAN17G0450 Fragaria x ananassa HOM05D004794 ORTHO05D005875 1.5e-116 423.7 262 79.8
Os01g0501700 Oryza sativa ssp. japonica HOM05D004794 ORTHO05D005875 2.0e-116 423.3 254 83.1
Aa31sc79G60 Aethionema arabicum HOM05D004794 ORTHO05D005875 2.6e-116 422.9 256 82.0
arahy.Tifrunner.gnm1.ann1.B80FEM Arachis hypogaea HOM05D004794 ORTHO05D005875 4.4e-116 422.2 254 83.5
Lalb_Chr06g0165741 Lupinus albus HOM05D004794 ORTHO05D005875 7.5e-116 421.4 254 83.5
Sp2g12580 Schrenkiella parvula HOM05D004794 ORTHO05D005875 7.5e-116 421.4 256 82.0
Ah.03g138420 Amaranthus hybridus HOM05D004794 ORTHO05D005875 9.8e-116 421.0 387 61.2
CARHR143660 Cardamine hirsuta HOM05D004794 ORTHO05D005875 9.8e-116 421.0 256 82.0
AT2G01110 Arabidopsis thaliana HOM05D004794 ORTHO05D005875 1.3e-115 420.6 255 82.0
BcaB07g30424 Brassica carinata HOM05D004794 ORTHO05D005875 1.3e-115 420.6 256 81.6
Carub.0005s0009 Capsella rubella HOM05D004794 ORTHO05D005875 1.3e-115 420.6 256 81.6
EL10Ac4g08742 Beta vulgaris HOM05D004794 ORTHO05D005875 2.2e-115 419.9 380 61.1
AUR62002773 Chenopodium quinoa HOM05D004794 ORTHO05D005875 2.2e-115 419.9 389 60.7
AL5G10060 Arabidopsis lyrata HOM05D004794 ORTHO05D005875 3.7e-115 419.1 255 81.6
A02p31690 Brassica napus HOM05D004794 ORTHO05D005875 3.7e-115 419.1 256 81.2
BraA02t08175Z Brassica rapa HOM05D004794 ORTHO05D005875 3.7e-115 419.1 256 81.2
HPP92_027135 Vanilla planifolia HOM05D004794 ORTHO05D005875 3.7e-115 419.1 262 80.2
arahy.Tifrunner.gnm1.ann1.9SFQ4R Arachis hypogaea HOM05D004794 ORTHO05D005875 4.9e-115 418.7 254 82.7
MD16G1034600 Malus domestica HOM05D004794 ORTHO05D005875 6.3e-115 418.3 351 63.8
Ca_23704_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 8.3e-115 417.9 254 81.9
Ca_30211_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 8.3e-115 417.9 254 81.9
BolC2t10997H Brassica oleracea HOM05D004794 ORTHO05D005875 1.1e-114 417.5 256 80.9
ECA246G3704 Erigeron canadensis HOM05D004794 ORTHO05D005875 1.1e-114 417.5 253 81.0
Medtr1g109080 Medicago truncatula HOM05D004794 ORTHO05D005875 1.1e-114 417.5 339 65.5
C07p31580 Brassica napus HOM05D004794 ORTHO05D005875 1.4e-114 417.2 268 78.0
C02p49070 Brassica napus HOM05D004794 ORTHO05D005875 1.8e-114 416.8 262 79.0
BcaC03g16998 Brassica carinata HOM05D004794 ORTHO05D005875 3.1e-114 416.0 256 80.5
BolC7t43697H Brassica oleracea HOM05D004794 ORTHO05D005875 3.1e-114 416.0 266 78.2
BcaC06g31333 Brassica carinata HOM05D004794 ORTHO05D005875 4.1e-114 415.6 256 80.5
BcaC06g34216 Brassica carinata HOM05D004794 ORTHO05D005875 5.4e-114 415.2 256 80.1
HPP92_021566 Vanilla planifolia HOM05D004794 ORTHO05D005875 5.4e-114 415.2 254 80.7
Lj5g0022431 Lotus japonicus HOM05D004794 ORTHO05D005875 9.2e-114 414.5 256 81.2
BraA06t27340Z Brassica rapa HOM05D004794 ORTHO05D005875 1.2e-113 414.1 266 77.4
A06p44670 Brassica napus HOM05D004794 ORTHO05D005875 2.0e-113 413.3 256 79.3
Duzib251G0273 Durio zibethinus HOM05D004794 ORTHO05D005875 3.5e-113 412.5 391 60.9
COL.COLO4_20120 Corchorus olitorius HOM05D004794 ORTHO05D005875 4.5e-113 412.1 244 86.1
SEGI_17562 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 2.5e-111 406.4 242 85.5
Duzib268G0539 Durio zibethinus HOM05D004794 ORTHO05D005875 3.3e-111 406.0 236 87.3
Lsat_1_v5_gn_4_15760 Lactuca sativa HOM05D004794 ORTHO05D005875 4.3e-111 405.6 385 60.5
Haze_00684 Corylus avellana HOM05D004794 ORTHO05D005875 1.0e-109 401.0 385 60.8
Rhsim12G0088300 Rhododendron simsii HOM05D004794 ORTHO05D005875 1.7e-107 393.7 335 64.2
HanXRQChr17g0567091 Helianthus annuus HOM05D004794 ORTHO05D005875 4.1e-106 389.0 378 59.3
SMO119G0095 Selaginella moellendorffii HOM05D004794 ORTHO05D005875 2.0e-105 386.7 252 77.0
ECA234G2688 Erigeron canadensis HOM05D004794 ORTHO05D005875 5.9e-105 385.2 260 74.6
AUR62037257 Chenopodium quinoa HOM05D004794 ORTHO05D005875 3.9e-104 382.5 480 50.2
Mapoly0010s0061 Marchantia polymorpha HOM05D004794 ORTHO05D005875 3.9e-104 382.5 243 78.2
HPP92_020138 Vanilla planifolia HOM05D004794 ORTHO05D005875 5.0e-104 382.1 248 78.2
AagrBONN_evm.TU.Sc2ySwM_368.2774 Anthoceros agrestis HOM05D004794 ORTHO05D005875 1.5e-103 380.6 254 74.8
DCAR_030186 Daucus carota HOM05D004794 ORTHO05D005875 1.5e-103 380.6 225 84.0
CBR_g19219 Chara braunii HOM05D004794 ORTHO05D005875 5.6e-103 378.6 245 78.8
Pp3c3_36440 Physcomitrium patens HOM05D004794 ORTHO05D005875 9.5e-103 377.9 247 76.5
Pp3c8_3800 Physcomitrium patens HOM05D004794 ORTHO05D005875 6.2e-102 375.2 247 76.9
Oeu022847.1 Olea europaea HOM05D004794 ORTHO05D005875 1.5e-100 370.5 323 65.6
Thhalv10000946m.g Eutrema salsugineum HOM05D004794 ORTHO05D005875 2.6e-100 369.8 256 75.0
PRCOL_00000588 Prasinoderma coloniale HOM05D004794 ORTHO05D005875 9.2e-98 361.3 253 71.1
TPR.G4856 Trifolium pratense HOM05D004794 ORTHO05D005875 6.2e-94 348.6 290 63.1
Zm00001eb399680 Zea mays HOM05D004794 ORTHO05D005875 4.9e-91 339.0 255 68.6
MCO02G003 Micromonas commoda HOM05D004794 ORTHO05D005875 1.6e-89 334.0 242 69.8
Cre03.g145887 Chlamydomonas reinhardtii HOM05D004794 ORTHO05D005875 1.1e-87 327.8 252 65.5
unitig_8.g3987 Utricularia gibba HOM05D000722 ORTHO05D000590 1.5e-79 300.8 276 58.7
VMungo0720G1627 Vigna mungo HOM05D004794 ORTHO05D005875 1.2e-73 281.2 355 49.9
A09p23220 Brassica napus HOM05D004794 ORTHO05D005875 1.9e-58 230.7 154 75.3
BraA09t37925Z Brassica rapa HOM05D004794 ORTHO05D005875 9.3e-58 228.4 154 74.7
BcaC03g16992 Brassica carinata HOM05D004794 ORTHO05D005875 1.9e-50 204.1 128 75.8
BolC2t10985H Brassica oleracea HOM05D004794 ORTHO05D005875 1.9e-50 204.1 128 75.8
Cpa.g.sc65.92 Carica papaya HOM05D004794 ORTHO05D005875 1.2e-44 184.9 108 87.0
SEGI_30482 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 7.7e-36 155.6 102 80.4
SEGI_31512 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 1.3e-35 154.8 99 81.8
C09p29960 Brassica napus HOM05D004794 ORTHO05D039171 7.4e-31 139.0 120 60.0
SEGI_19547 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 5.3e-29 132.9 79 81.0
BcaC04g21603 Brassica carinata HOM05D004794 ORTHO05D039171 3.3e-23 113.6 102 60.8
unitig_8.g3988 Utricularia gibba HOM05D004794 ORTHO05D005875 1.4e-21 108.2 61 90.2
BolC9t55859H Brassica oleracea HOM05D004794 ORTHO05D005875 1.1e-18 98.6 64 76.6


User provided reference genes

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