Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 5.7e-63 244.2 134 100.0
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.7e-35 152.9 132 65.9
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.3e-35 152.5 121 70.2
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 3.9e-35 151.8 130 63.1
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 1.1e-34 150.2 131 64.9
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 1.9e-34 149.4 131 65.6
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.9e-34 149.4 121 70.2
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.3e-34 148.7 121 68.6
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 3.3e-34 148.7 121 70.2
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 7.3e-34 147.5 121 69.4
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 6.2e-33 144.4 110 71.8
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 8.0e-33 144.1 132 63.6
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 1.0e-32 143.7 118 66.1
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 1.4e-32 143.3 133 62.4
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.8e-32 142.9 116 67.2
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.8e-32 142.9 131 61.1
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 2.3e-32 142.5 118 68.6
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 3.1e-32 142.1 118 65.3
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 2.0e-31 139.4 130 60.0
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 4.4e-31 138.3 129 58.1
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 3.7e-30 135.2 134 57.5
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 3.7e-30 135.2 134 56.7
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.9e-29 132.9 132 57.6
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 2.4e-29 132.5 127 56.7
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.4e-29 132.5 131 58.0
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 5.4e-29 131.3 135 56.3
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.2e-28 130.2 131 55.7
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.6e-28 129.8 128 57.8
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 2.7e-28 129.0 130 54.6
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.7e-28 129.0 121 59.5
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 1.3e-27 126.7 125 57.6
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.7e-27 126.3 128 60.9
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 5.0e-27 124.8 131 53.4
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 5.0e-27 124.8 130 56.2
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 5.0e-27 124.8 132 56.8
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 5.0e-27 124.8 114 59.6
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 1.1e-26 123.6 128 54.7
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.1e-26 123.6 131 55.7
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.5e-26 123.2 129 55.8
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 1.9e-26 122.9 129 54.3
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 1.9e-26 122.9 128 54.7
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 2.5e-26 122.5 128 54.7
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-26 122.1 128 53.9
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-26 122.1 128 53.9
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 3.3e-26 122.1 119 56.3
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.3e-26 122.1 128 58.6
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 5.6e-26 121.3 125 53.6
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 7.3e-26 120.9 119 57.1
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 9.5e-26 120.6 129 53.5
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 2.1e-25 119.4 120 54.2
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 2.8e-25 119.0 130 56.9
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.8e-25 119.0 128 53.1
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 4.7e-25 118.2 120 55.0
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 6.2e-25 117.9 123 55.3
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 6.2e-25 117.9 120 55.0
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 6.2e-25 117.9 120 55.0
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 6.2e-25 117.9 115 59.1
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 6.2e-25 117.9 117 55.6
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 8.1e-25 117.5 125 55.2
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 8.1e-25 117.5 125 55.2
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 8.1e-25 117.5 125 55.2
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 8.1e-25 117.5 130 51.5
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 1.1e-24 117.1 117 58.1
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 1.1e-24 117.1 117 58.1
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 1.1e-24 117.1 128 53.1
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 1.1e-24 117.1 128 53.1
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.1e-24 117.1 120 57.5
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 1.4e-24 116.7 119 58.0
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 1.8e-24 116.3 125 54.4
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 1.8e-24 116.3 131 51.1
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 2.3e-24 115.9 125 55.2
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 2.3e-24 115.9 125 55.2
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.1e-24 115.5 118 55.1
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 4.0e-24 115.2 120 55.8
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 6.8e-24 114.4 128 52.3
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 6.8e-24 114.4 130 50.8
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 6.8e-24 114.4 109 57.8
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.2e-23 113.6 131 51.1
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 1.5e-23 113.2 99 59.6
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 2.6e-23 112.5 133 50.4
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 3.4e-23 112.1 130 52.3
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 3.4e-23 112.1 120 54.2
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 4.4e-23 111.7 110 59.1
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 5.8e-23 111.3 97 59.8
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 9.8e-23 110.5 130 48.5
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 9.8e-23 110.5 118 54.2
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.7e-22 109.8 128 53.1
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 2.2e-22 109.4 117 52.1
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 2.2e-22 109.4 130 50.8
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.2e-22 109.4 97 59.8
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 2.2e-22 109.4 114 51.8
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 2.9e-22 109.0 142 47.9
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 6.4e-22 107.8 124 50.0
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 8.3e-22 107.5 128 53.1
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.1e-21 107.1 122 50.8
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.4e-21 106.7 93 60.2
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.2e-20 103.6 118 52.5
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 4.6e-20 101.7 118 51.7
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 4.6e-20 101.7 120 49.2
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 6.0e-20 101.3 136 47.8
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 6.0e-20 101.3 128 50.0
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 1.3e-19 100.1 126 46.8
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.7e-19 99.8 117 48.7
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 1.7e-19 99.8 89 62.9
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 3.0e-19 99.0 122 46.7
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 5.1e-19 98.2 101 57.4
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 3.3e-18 95.5 120 45.8
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 4.3e-18 95.1 128 45.3
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 5.6e-18 94.7 127 44.9
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 6.2e-17 91.3 84 53.6
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 1.4e-16 90.1 103 49.5
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.6e-15 85.9 69 65.2
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 8.4e-14 80.9 119 39.5
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 3.2e-13 79.0 64 65.6
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 2.7e-12 75.9 104 43.3
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.5e-12 75.5 64 65.6
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 7.8e-12 74.3 113 41.6
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 3.0e-11 72.4 99 43.4
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 8.6e-11 70.9 85 45.9
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 8.6e-11 70.9 81 49.4
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.5e-10 70.1 78 47.4
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 5.6e-10 68.2 103 37.9
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 4.0e-08 62.0 122 35.2
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 7.6e-07 57.8 106 32.1


User provided reference genes

Program Settings