Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 7.5e-135 483.8 234 100.0
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 9.9e-95 350.5 235 70.2
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 1.2e-92 343.6 235 69.4
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 7.8e-92 340.9 230 68.3
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 3.9e-91 338.6 235 67.2
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 6.6e-91 337.8 235 66.4
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 6.6e-91 337.8 235 66.8
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 1.5e-90 336.7 235 65.5
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 1.9e-90 336.3 235 67.2
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.9e-90 336.3 235 67.7
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.9e-90 336.3 235 67.2
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.3e-90 335.5 235 67.2
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 4.3e-90 335.1 235 67.2
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 5.6e-90 334.7 230 68.7
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 9.6e-90 334.0 235 66.8
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 2.8e-89 332.4 235 66.4
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 3.6e-89 332.0 234 67.5
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 3.6e-89 332.0 235 66.0
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 3.6e-89 332.0 265 60.4
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 6.2e-89 331.3 238 66.4
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 6.2e-89 331.3 235 66.8
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 1.4e-88 330.1 232 65.1
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 5.2e-88 328.2 230 66.5
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 1.2e-87 327.0 231 66.7
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 1.5e-87 326.6 235 65.1
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 2.6e-87 325.9 242 63.2
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 1.7e-86 323.2 228 67.5
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 2.2e-86 322.8 267 59.2
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 2.9e-86 322.4 235 63.8
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 3.8e-86 322.0 246 63.0
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 6.4e-86 321.2 231 67.5
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 1.1e-85 320.5 238 64.3
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 1.4e-85 320.1 248 61.7
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 2.4e-85 319.3 236 64.4
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 3.2e-85 318.9 242 64.5
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 7.1e-85 317.8 234 62.4
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 9.3e-85 317.4 235 64.7
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.2e-84 317.0 272 58.1
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 1.2e-84 317.0 234 61.5
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 1.6e-84 316.6 237 63.3
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 7.8e-84 314.3 233 61.8
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 3.9e-83 312.0 228 62.7
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 5.1e-83 311.6 234 60.7
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 8.7e-83 310.8 230 60.9
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 5.6e-82 308.1 226 62.8
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.6e-81 306.6 235 61.3
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.8e-81 305.8 235 61.3
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 3.6e-81 305.4 232 60.3
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.6e-81 305.4 229 65.9
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 4.8e-81 305.1 235 61.3
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 3.1e-80 302.4 245 60.0
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.1e-80 302.4 229 65.5
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 5.3e-80 301.6 233 60.5
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 6.9e-80 301.2 233 60.9
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 9.0e-80 300.8 229 65.1
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 9.0e-80 300.8 234 60.7
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.5e-79 300.1 209 67.9
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 2.0e-79 299.7 235 59.6
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 5.8e-79 298.1 211 64.9
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 2.2e-78 296.2 228 60.5
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 1.1e-77 293.9 232 58.6
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.9e-77 293.1 225 61.3
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.4e-77 292.7 225 61.3
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 3.2e-77 292.4 225 61.3
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 9.3e-77 290.8 233 58.4
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 7.9e-76 287.7 233 58.8
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.8e-75 286.6 235 58.3
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.8e-75 286.6 234 59.0
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 3.9e-75 285.4 233 57.9
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 1.6e-73 280.0 230 57.0
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 1.6e-73 280.0 232 56.5
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 2.8e-73 279.3 235 55.3
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 1.8e-72 276.6 241 56.4
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 4.0e-72 275.4 234 56.4
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 4.0e-72 275.4 232 56.9
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 5.3e-72 275.0 228 59.2
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 6.9e-72 274.6 232 56.5
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 9.0e-72 274.2 234 54.3
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 1.5e-71 273.5 228 56.1
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 2.0e-71 273.1 266 52.3
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 5.8e-71 271.6 207 59.9
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 9.9e-71 270.8 234 54.3
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 9.9e-71 270.8 234 53.0
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 4.9e-70 268.5 233 54.5
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 1.9e-69 266.5 207 59.9
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 3.2e-69 265.8 228 54.4
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 4.2e-69 265.4 234 54.7
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 5.5e-69 265.0 228 53.5
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 5.5e-69 265.0 240 53.8
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 5.5e-69 265.0 240 53.8
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.3e-65 253.8 183 66.1
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 3.4e-63 245.7 249 51.0
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 2.7e-60 236.1 211 52.6
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 9.0e-56 221.1 230 47.4
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 4.5e-55 218.8 228 46.1
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 4.1e-48 195.7 120 75.8
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 2.2e-46 189.9 152 53.3
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 8.5e-46 188.0 140 65.0
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 9.4e-37 157.9 239 37.2
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 2.4e-32 143.3 236 35.6
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 1.3e-30 137.5 123 55.3
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 1.8e-27 127.1 90 65.6
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 5.2e-27 125.6 90 64.4
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 6.3e-25 118.6 173 38.2
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 5.3e-24 115.5 86 64.0
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 5.3e-24 115.5 72 70.8
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 1.6e-23 114.0 116 49.1
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 1.9e-21 107.1 78 60.3
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 2.1e-20 103.6 141 41.1
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 1.9e-13 80.5 57 63.2
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 5.2e-11 72.4 53 58.5
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 8.8e-11 71.6 101 40.6
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 1.2e-07 61.2 38 78.9
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 2.7e-07 60.1 38 76.3
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 5.0e-06 55.8 40 65.0


User provided reference genes

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