Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048246.1 Olea europaea HOM05D005580 ORTHO05D006395 2.9e-54 214.9 104 100.0
Oeu064380.1 Olea europaea HOM05D005580 ORTHO05D006395 1.5e-47 192.6 104 91.3
Cpa.g.sc1.404 Carica papaya HOM05D005580 ORTHO05D006395 1.6e-44 182.6 104 80.8
Thecc.10G042400 Theobroma cacao HOM05D005580 ORTHO05D006395 7.9e-44 180.3 104 82.7
DCAR_011695 Daucus carota HOM05D005580 ORTHO05D006395 3.9e-43 177.9 104 81.7
CANSAT56G2481 Cannabis sativa HOM05D005580 ORTHO05D006395 6.6e-43 177.2 104 81.7
CANSAT56G4483 Cannabis sativa HOM05D005580 ORTHO05D006395 6.6e-43 177.2 104 81.7
Atru.chr12.452 Acer truncatum HOM05D005580 ORTHO05D006395 8.7e-43 176.8 105 81.9
Atru.chr12.474 Acer truncatum HOM05D005580 ORTHO05D006395 8.7e-43 176.8 105 81.9
MD01G1134100 Malus domestica HOM05D005580 ORTHO05D006395 1.1e-42 176.4 104 83.7
Duzib128G0371 Durio zibethinus HOM05D005580 ORTHO05D006395 1.5e-42 176.0 104 80.8
Potri.010G203900 Populus trichocarpa HOM05D005580 ORTHO05D006395 1.9e-42 175.6 104 81.7
Actinidia02948 Actinidia chinensis HOM05D005580 ORTHO05D006395 2.5e-42 175.3 104 80.8
Duzib106G1822 Durio zibethinus HOM05D005580 ORTHO05D006395 2.5e-42 175.3 104 81.7
FvH4_7g22470 Fragaria vesca HOM05D005580 ORTHO05D006395 3.3e-42 174.9 104 82.7
FAN01G0694 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.3e-42 174.9 104 82.7
FAN01G2215 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.3e-42 174.9 104 82.7
FAN03G1496 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.3e-42 174.9 104 82.7
FAN06G0736 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.3e-42 174.9 104 82.7
FAN06G1328 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.3e-42 174.9 104 82.7
FAN10G2347 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.3e-42 174.9 104 82.7
Cfa001474 Carpinus fangiana HOM05D005580 ORTHO05D006395 7.3e-42 173.7 104 79.8
Potri.008G055800 Populus trichocarpa HOM05D005580 ORTHO05D006395 7.3e-42 173.7 104 79.8
Cc02_g07860 Coffea canephora HOM05D005580 ORTHO05D006395 9.6e-42 173.3 104 81.7
RcHm_v2.0_Chr1g0367081 Rosa chinensis HOM05D005580 ORTHO05D006395 1.3e-41 172.9 104 80.8
MSTRG.8252 Avicennia marina HOM05D005580 ORTHO05D006395 1.6e-41 172.6 104 81.7
COL.COLO4_15040 Corchorus olitorius HOM05D005580 ORTHO05D006395 1.6e-41 172.6 104 79.8
GSVIVG01016552001 Vitis vinifera HOM05D005580 ORTHO05D006395 2.8e-41 171.8 104 80.8
CSS0041204 Camellia sinensis var. sinensis HOM05D005580 ORTHO05D006395 4.8e-41 171.0 104 77.9
CiPaw.01G287400 Carya illinoinensis HOM05D005580 ORTHO05D006395 4.8e-41 171.0 104 79.8
MD07G1198300 Malus domestica HOM05D005580 ORTHO05D006395 6.2e-41 170.6 104 80.8
Manes.10G030300 Manihot esculenta HOM05D005580 ORTHO05D006395 1.1e-40 169.9 104 77.9
Sed0020308 Sechium edule HOM05D005580 ORTHO05D006395 1.1e-40 169.9 104 79.8
Gorai.013G022300 Gossypium raimondii HOM05D005580 ORTHO05D006395 1.8e-40 169.1 104 78.8
Lj1P937T48 Lonicera japonica HOM05D005580 ORTHO05D006395 1.8e-40 169.1 104 77.9
Prupe.2G235300 Prunus persica HOM05D005580 ORTHO05D006395 1.8e-40 169.1 104 78.8
Gohir.D13G019900 Gossypium hirsutum HOM05D005580 ORTHO05D006395 2.4e-40 168.7 104 77.9
QL08p059794 Quercus lobata HOM05D005580 ORTHO05D006395 2.4e-40 168.7 103 77.7
ClCG09G019730 Citrullus lanatus HOM05D005580 ORTHO05D006395 3.1e-40 168.3 104 78.8
Manes.07G116200 Manihot esculenta HOM05D005580 ORTHO05D006395 3.1e-40 168.3 104 79.8
TWI38G1118 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 3.1e-40 168.3 104 77.9
Migut.F01495 Erythranthe guttata HOM05D005580 ORTHO05D006395 4.0e-40 167.9 104 78.8
Eucgr.G02934 Eucalyptus grandis HOM05D005580 ORTHO05D006395 4.0e-40 167.9 104 76.0
Rhsim03G0130700 Rhododendron simsii HOM05D005580 ORTHO05D006395 4.0e-40 167.9 104 76.0
TAR633G1881 Trochodendron aralioides HOM05D005580 ORTHO05D006395 4.0e-40 167.9 104 76.0
Gohir.A13G019300 Gossypium hirsutum HOM05D005580 ORTHO05D006395 5.3e-40 167.5 104 77.9
Nn2g11101 Nelumbo nucifera HOM05D005580 ORTHO05D006395 5.3e-40 167.5 104 76.9
Nitab4.5_0013062g0010 Nicotiana tabacum HOM05D005580 ORTHO05D006395 5.3e-40 167.5 104 77.9
Lsat_1_v5_gn_2_119121 Lactuca sativa HOM05D005580 ORTHO05D006395 6.9e-40 167.2 109 75.2
Nn2g13341 Nelumbo nucifera HOM05D005580 ORTHO05D006395 6.9e-40 167.2 104 74.0
Nitab4.5_0001097g0030 Nicotiana tabacum HOM05D005580 ORTHO05D006395 6.9e-40 167.2 104 76.9
Sabra08G0040500 Salix brachista HOM05D005580 ORTHO05D006395 6.9e-40 167.2 104 77.9
TAR623G0785 Trochodendron aralioides HOM05D005580 ORTHO05D006395 6.9e-40 167.2 104 75.0
VMungo1383G1027 Vigna mungo HOM05D005580 ORTHO05D006395 6.9e-40 167.2 104 74.0
MELO3C021630.2 Cucumis melo HOM05D005580 ORTHO05D006395 9.0e-40 166.8 104 77.9
CsaV3_5G026670 Cucumis sativus L. HOM05D005580 ORTHO05D006395 9.0e-40 166.8 104 77.9
Glyma.02G091600 Glycine max HOM05D005580 ORTHO05D006395 1.5e-39 166.0 104 73.1
HanXRQChr14g0457951 Helianthus annuus HOM05D005580 ORTHO05D006395 1.5e-39 166.0 104 77.9
Ciclev10032947m.g Citrus clementina HOM05D005580 ORTHO05D006395 2.6e-39 165.2 102 79.4
Glyma.18G291400 Glycine max HOM05D005580 ORTHO05D006395 1.3e-38 162.9 106 72.6
THA.LOC104810028 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 2.2e-38 162.2 104 70.2
Gohir.A10G218800 Gossypium hirsutum HOM05D005580 ORTHO05D006395 2.9e-38 161.8 104 75.0
Gohir.D10G228400 Gossypium hirsutum HOM05D005580 ORTHO05D006395 2.9e-38 161.8 104 75.0
Gorai.011G260800 Gossypium raimondii HOM05D005580 ORTHO05D006395 2.9e-38 161.8 104 75.0
Peaxi162Scf00886g00003 Petunia axillaris HOM05D005580 ORTHO05D006395 2.9e-38 161.8 102 77.5
Sed0002022 Sechium edule HOM05D005580 ORTHO05D006395 2.9e-38 161.8 104 74.0
CiPaw.02G183900 Carya illinoinensis HOM05D005580 ORTHO05D006395 3.8e-38 161.4 102 76.5
Sabra10G0157500 Salix brachista HOM05D005580 ORTHO05D006395 3.8e-38 161.4 104 76.0
SalBow6G2402 Salvia bowleyana HOM05D005580 ORTHO05D006395 3.8e-38 161.4 104 74.0
DCAR_027619 Daucus carota HOM05D005580 ORTHO05D006395 4.9e-38 161.0 104 73.1
SGA_v2.0_scaffold2G01004 Striga asiatica HOM05D005580 ORTHO05D006395 6.4e-38 160.6 104 73.1
Phvul.008G010700 Phaseolus vulgaris HOM05D005580 ORTHO05D006395 8.4e-38 160.2 97 74.2
TWI63G0967 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 8.4e-38 160.2 104 76.0
SGA_v2.0_scaffold221G42666 Striga asiatica HOM05D005580 ORTHO05D006395 1.9e-37 159.1 101 74.3
vmacro07170 Vaccinium macrocarpon HOM05D005580 ORTHO05D006395 2.4e-37 158.7 97 74.2
Lalb_Chr17g0336141 Lupinus albus HOM05D005580 ORTHO05D006395 3.2e-37 158.3 104 73.1
PGSC0003DMG400023532 Solanum tuberosum HOM05D005580 ORTHO05D006395 3.2e-37 158.3 104 73.1
Sc10g0001550 Simmondsia chinensis HOM05D005580 ORTHO05D006395 5.4e-37 157.5 104 74.0
Solyc05g054450.1 Solanum lycopersicum HOM05D005580 ORTHO05D006395 5.4e-37 157.5 104 72.1
Sopen05g032940 Solanum pennellii HOM05D005580 ORTHO05D006395 5.4e-37 157.5 104 72.1
Lj1g0024567 Lotus japonicus HOM05D005580 ORTHO05D006395 7.1e-37 157.1 104 72.1
Lsat_1_v5_gn_8_15580 Lactuca sativa HOM05D005580 ORTHO05D006395 1.6e-36 156.0 104 72.1
HPP92_019446 Vanilla planifolia HOM05D005580 ORTHO05D006395 1.6e-36 156.0 104 71.2
ECA238G1104 Erigeron canadensis HOM05D005580 ORTHO05D006395 2.1e-36 155.6 107 71.0
Medtr7g026320 Medicago truncatula HOM05D005580 ORTHO05D006395 4.6e-36 154.5 104 70.2
Carub.0005s2214 Capsella rubella HOM05D005580 ORTHO05D006395 6.0e-36 154.1 102 71.6
MBI05_g22035_MAGBIO Magnolia biondii HOM05D005580 ORTHO05D006395 6.0e-36 154.1 104 74.0
Sp5g07050 Schrenkiella parvula HOM05D005580 ORTHO05D006395 1.0e-35 153.3 102 71.6
AL5G36570 Arabidopsis lyrata HOM05D005580 ORTHO05D006395 1.3e-35 152.9 102 72.5
A09p48340 Brassica napus HOM05D005580 ORTHO05D006395 1.3e-35 152.9 102 71.6
BraA09t40286Z Brassica rapa HOM05D005580 ORTHO05D006395 1.3e-35 152.9 102 71.6
HanXRQChr02g0037481 Helianthus annuus HOM05D005580 ORTHO05D006395 1.3e-35 152.9 104 69.2
AT3G55420 Arabidopsis thaliana HOM05D005580 ORTHO05D006395 3.0e-35 151.8 102 71.6
PSO339G4490 Papaver somniferum HOM05D005580 ORTHO05D006395 5.1e-35 151.0 104 69.2
PSO384G2205 Papaver somniferum HOM05D005580 ORTHO05D006395 5.1e-35 151.0 104 69.2
Thhalv10010708m.g Eutrema salsugineum HOM05D005580 ORTHO05D006395 8.7e-35 150.2 98 72.4
A04p04530 Brassica napus HOM05D005580 ORTHO05D006395 1.5e-34 149.4 102 70.6
C08p30460 Brassica napus HOM05D005580 ORTHO05D006395 1.5e-34 149.4 102 70.6
C08p30630 Brassica napus HOM05D005580 ORTHO05D006395 1.5e-34 149.4 102 70.6
BraA04t16163Z Brassica rapa HOM05D005580 ORTHO05D006395 1.5e-34 149.4 102 70.6
PSO339G6083 Papaver somniferum HOM05D005580 ORTHO05D006395 1.5e-34 149.4 101 72.3
BcaB01g00102 Brassica carinata HOM05D005580 ORTHO05D006395 1.9e-34 149.1 102 70.6
BcaC02g09755 Brassica carinata HOM05D005580 ORTHO05D006395 1.9e-34 149.1 102 71.6
BcaC07g39844 Brassica carinata HOM05D005580 ORTHO05D006395 1.9e-34 149.1 102 70.6
C04p36960 Brassica napus HOM05D005580 ORTHO05D006395 1.9e-34 149.1 102 71.6
BolC4t25261H Brassica oleracea HOM05D005580 ORTHO05D006395 1.9e-34 149.1 102 71.6
BolC8t50680H Brassica oleracea HOM05D005580 ORTHO05D006395 1.9e-34 149.1 102 70.6
THA.LOC104807715 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 2.5e-34 148.7 104 67.3
TPR.G23775 Trifolium pratense HOM05D005580 ORTHO05D006395 2.5e-34 148.7 105 68.6
Lj8C84T10 Lonicera japonica HOM05D005580 ORTHO05D006395 3.3e-34 148.3 104 64.4
unitig_8.g3317 Utricularia gibba HOM05D005580 ORTHO05D006395 3.3e-34 148.3 104 71.2
ClCG07G003270 Citrullus lanatus HOM05D005580 ORTHO05D006395 5.6e-34 147.5 112 64.3
PSO151G0057 Papaver somniferum HOM05D005580 ORTHO05D006395 5.6e-34 147.5 101 71.3
Os05g0459300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 7.4e-34 147.1 104 71.2
BcaC07g39859 Brassica carinata HOM05D005580 ORTHO05D006395 1.3e-33 146.4 95 70.5
PGR142G3643 Punica granatum HOM05D005580 ORTHO05D006395 6.2e-33 144.1 107 68.2
Ca_26455_v3 Cicer arietinum L. HOM05D005580 ORTHO05D006395 8.1e-33 143.7 104 66.3
Lalb_Chr10g0091641 Lupinus albus HOM05D005580 ORTHO05D006395 1.4e-32 142.9 104 64.4
SEGI_33908 Sequoiadendron giganteum HOM05D005580 ORTHO05D006395 1.4e-32 142.9 104 65.4
Aa31LG10G10450 Aethionema arabicum HOM05D005580 ORTHO05D006395 2.4e-32 142.1 91 74.7
MELO3C023848.2 Cucumis melo HOM05D005580 ORTHO05D006395 9.0e-32 140.2 108 62.0
THA.LOC104824274 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 9.0e-32 140.2 96 65.6
Psat3g161760 Pisum sativum HOM05D005580 ORTHO05D006395 4.5e-31 137.9 108 62.0
Sed0012553 Sechium edule HOM05D005580 ORTHO05D006395 4.5e-31 137.9 108 61.1
CsaV3_5G008020 Cucumis sativus L. HOM05D005580 ORTHO05D006395 5.8e-31 137.5 109 59.6
ATR0559G355 Amborella trichopoda HOM05D005580 ORTHO05D006395 1.7e-30 136.0 104 62.5
Ah.16g102300 Amaranthus hybridus HOM05D005580 ORTHO05D006395 1.9e-29 132.5 94 64.9
AUR62012083 Chenopodium quinoa HOM05D005580 ORTHO05D006395 4.2e-29 131.3 95 64.2
AUR62039380 Chenopodium quinoa HOM05D000020 ORTHO05D001617 1.2e-28 129.8 95 63.2
CDE02G1824 Ceratophyllum demersum HOM05D005580 ORTHO05D006395 2.1e-28 129.0 93 64.5
Dinv26015 Davidia involucrata HOM05D005580 ORTHO05D006395 3.5e-28 128.3 84 70.2
Os12g0571300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 1.3e-27 126.3 103 59.2
Cc05_g01760 Coffea canephora HOM05D005580 ORTHO05D006395 3.0e-27 125.2 85 70.6
BcaB02g08423 Brassica carinata HOM05D005580 ORTHO05D006395 1.3e-19 99.8 61 73.8
CARHR165440 Cardamine hirsuta HOM05D005580 ORTHO05D006395 1.8e-19 99.4 61 72.1
Dinv03047 Davidia involucrata HOM05D005580 ORTHO05D006395 9.7e-18 93.6 57 80.7
arahy.Tifrunner.gnm1.ann1.HEV3CF Arachis hypogaea HOM05D000969 ORTHO05D011765 1.2e-15 86.7 63 66.7
SEGI_21732 Sequoiadendron giganteum HOM05D003049 ORTHO05D003531 1.3e-09 66.6 41 70.7


User provided reference genes

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