Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048228.1 Olea europaea HOM05D004236 ORTHO05D004903 1.4e-57 226.1 116 100.0
Oeu047429.3 Olea europaea HOM05D004236 ORTHO05D004903 2.5e-51 205.3 115 90.4
SalBow3G2011 Salvia bowleyana HOM05D004236 ORTHO05D004903 4.1e-49 198.0 115 85.2
SalBow3G4331 Salvia bowleyana HOM05D004236 ORTHO05D004903 4.1e-49 198.0 115 85.2
TPR.G28393 Trifolium pratense HOM05D004236 ORTHO05D004903 1.9e-46 189.1 117 81.2
Migut.H00256 Erythranthe guttata HOM05D004236 ORTHO05D004903 4.2e-46 188.0 115 80.0
Dinv33978 Davidia involucrata HOM05D004236 ORTHO05D004903 7.2e-46 187.2 115 80.9
Hma1.2p1_0500F.1_g166960 Hydrangea macrophylla HOM05D004236 ORTHO05D004903 1.6e-45 186.0 115 79.1
Medtr7g082910 Medicago truncatula HOM05D004236 ORTHO05D004903 2.1e-45 185.7 115 79.1
Psat3g096800 Pisum sativum HOM05D004236 ORTHO05D004903 3.6e-45 184.9 117 79.5
SGA_v2.0_scaffold202G41491 Striga asiatica HOM05D004236 ORTHO05D004903 3.6e-45 184.9 115 81.7
vmacro05491 Vaccinium macrocarpon HOM05D004236 ORTHO05D004903 3.6e-45 184.9 115 80.9
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 1.0e-44 183.3 115 78.3
Cc07_g08360 Coffea canephora HOM05D004236 ORTHO05D004903 1.4e-44 183.0 115 80.9
Glyma.02G090500 Glycine max HOM05D004236 ORTHO05D004903 1.4e-44 183.0 117 77.8
Rhsim10G0077900 Rhododendron simsii HOM05D004236 ORTHO05D004903 1.8e-44 182.6 115 79.1
CSS0010670 Camellia sinensis var. sinensis HOM05D004236 ORTHO05D004903 2.3e-44 182.2 115 80.0
CSS0025273 Camellia sinensis var. sinensis HOM05D004236 ORTHO05D004903 2.3e-44 182.2 115 80.0
CSS0029696 Camellia sinensis var. sinensis HOM05D004236 ORTHO05D004903 3.9e-44 181.4 115 78.3
Rhsim08G0084400 Rhododendron simsii HOM05D004236 ORTHO05D004903 5.1e-44 181.0 115 78.3
Ca_08100_v3 Cicer arietinum L. HOM05D004236 ORTHO05D004903 8.8e-44 180.3 117 77.8
Dinv14861 Davidia involucrata HOM05D004236 ORTHO05D004903 8.8e-44 180.3 115 78.3
Glyma.18G292800 Glycine max HOM05D004236 ORTHO05D004903 8.8e-44 180.3 117 76.9
Phvul.008G009300 Phaseolus vulgaris HOM05D004236 ORTHO05D004903 8.8e-44 180.3 117 77.8
Dinv23330 Davidia involucrata HOM05D004236 ORTHO05D004903 1.1e-43 179.9 115 78.3
Lj1g0012263 Lotus japonicus HOM05D004236 ORTHO05D004903 1.5e-43 179.5 117 76.1
Prupe.3G150900 Prunus persica HOM05D004236 ORTHO05D004903 2.5e-43 178.7 115 77.4
Lalb_Chr04g0257721 Lupinus albus HOM05D004236 ORTHO05D004903 4.3e-43 177.9 117 76.9
Peaxi162Scf00104g01815 Petunia axillaris HOM05D004236 ORTHO05D004903 4.3e-43 177.9 115 78.3
DCAR_010720 Daucus carota HOM05D004236 ORTHO05D004903 7.4e-43 177.2 115 77.4
PGSC0003DMG400016698 Solanum tuberosum HOM05D004236 ORTHO05D004903 7.4e-43 177.2 115 78.3
arahy.Tifrunner.gnm1.ann1.LVD2NH Arachis hypogaea HOM05D004236 ORTHO05D004903 9.7e-43 176.8 115 74.8
arahy.Tifrunner.gnm1.ann1.UY7CFX Arachis hypogaea HOM05D004236 ORTHO05D004903 9.7e-43 176.8 115 74.8
FAN23G2326 Fragaria x ananassa HOM05D004236 ORTHO05D004903 1.7e-42 176.0 115 73.9
FAN26G2772 Fragaria x ananassa HOM05D004236 ORTHO05D004903 1.7e-42 176.0 115 73.9
MD09G1258900 Malus domestica HOM05D004236 ORTHO05D004903 1.7e-42 176.0 115 75.7
Lsat_1_v5_gn_4_156001 Lactuca sativa HOM05D004236 ORTHO05D004903 3.7e-42 174.9 115 74.8
RcHm_v2.0_Chr3g0493661 Rosa chinensis HOM05D004236 ORTHO05D004903 4.8e-42 174.5 115 74.8
HanXRQChr09g0262441 Helianthus annuus HOM05D004236 ORTHO05D004903 8.2e-42 173.7 115 75.7
Lsat_1_v5_gn_2_81141 Lactuca sativa HOM05D004236 ORTHO05D004903 8.2e-42 173.7 115 73.9
FvH4_1g29040 Fragaria vesca HOM05D004236 ORTHO05D004903 1.1e-41 173.3 115 73.0
FAN19G1079 Fragaria x ananassa HOM05D004236 ORTHO05D004903 1.1e-41 173.3 115 73.0
TWI53G1957 Tripterygium wilfordii HOM05D004236 ORTHO05D004903 1.1e-41 173.3 119 73.1
Actinidia17648 Actinidia chinensis HOM05D004236 ORTHO05D004903 1.4e-41 172.9 108 78.7
Lj4A180T59 Lonicera japonica HOM05D004236 ORTHO05D004903 1.4e-41 172.9 115 75.7
Nitab4.5_0002456g0050 Nicotiana tabacum HOM05D004236 ORTHO05D004903 4.1e-41 171.4 115 79.1
ECA238G4753 Erigeron canadensis HOM05D004236 ORTHO05D004903 5.3e-41 171.0 113 74.3
VMungo1383G0222 Vigna mungo HOM05D004236 ORTHO05D004903 9.1e-41 170.2 117 76.1
Nn1g02732 Nelumbo nucifera HOM05D004236 ORTHO05D004903 1.5e-40 169.5 115 73.9
MD17G1253400 Malus domestica HOM05D004236 ORTHO05D004903 2.0e-40 169.1 115 73.0
Cpa.g.sc116.5 Carica papaya HOM05D004236 ORTHO05D004903 4.5e-40 167.9 118 72.0
Atru.chr1.1563 Acer truncatum HOM05D004236 ORTHO05D004903 1.0e-39 166.8 119 71.4
CANSAT80G2204 Cannabis sativa HOM05D004236 ORTHO05D004903 1.0e-39 166.8 117 70.9
CAN.G11.35 Capsicum annuum HOM05D004236 ORTHO05D004903 1.0e-39 166.8 115 73.9
ECA232G1241 Erigeron canadensis HOM05D004236 ORTHO05D004903 1.0e-39 166.8 120 72.5
Nn3g18026 Nelumbo nucifera HOM05D004236 ORTHO05D004903 1.7e-39 166.0 115 72.2
THA.LOC104805594 Tarenaya hassleriana HOM05D004236 ORTHO05D004903 1.7e-39 166.0 119 71.4
PGSC0003DMG400030596 Solanum tuberosum HOM05D004236 ORTHO05D004903 2.2e-39 165.6 115 75.7
Lsat_1_v5_gn_4_15520 Lactuca sativa HOM05D004236 ORTHO05D004903 3.8e-39 164.9 117 71.8
Manes.01G114300 Manihot esculenta HOM05D004236 ORTHO05D004903 3.8e-39 164.9 115 67.0
CiPaw.03G066200 Carya illinoinensis HOM05D004236 ORTHO05D004903 6.5e-39 164.1 116 70.7
Solyc02g091190.4 Solanum lycopersicum HOM05D004236 ORTHO05D004903 6.5e-39 164.1 115 74.8
Eucgr.J01534 Eucalyptus grandis HOM05D004236 ORTHO05D004903 8.5e-39 163.7 118 72.0
ClCG05G010730 Citrullus lanatus HOM05D004236 ORTHO05D004903 1.1e-38 163.3 118 72.0
Peaxi162Scf00803g00219 Petunia axillaris HOM05D004236 ORTHO05D004903 1.1e-38 163.3 116 75.0
Aa31LG2G3180 Aethionema arabicum HOM05D004236 ORTHO05D004903 1.4e-38 162.9 118 68.6
Sopen02g035820 Solanum pennellii HOM05D004236 ORTHO05D004903 1.4e-38 162.9 115 73.9
GSVIVG01030921001 Vitis vinifera HOM05D004236 ORTHO05D004903 1.4e-38 162.9 115 68.7
Nn4g24056 Nelumbo nucifera HOM05D004236 ORTHO05D004903 1.9e-38 162.5 116 70.7
Ciclev10012115m.g Citrus clementina HOM05D004236 ORTHO05D004903 2.5e-38 162.2 119 71.4
TAR622G0693 Trochodendron aralioides HOM05D004236 ORTHO05D004903 2.5e-38 162.2 115 70.4
CiPaw.04G044800 Carya illinoinensis HOM05D004236 ORTHO05D004903 3.2e-38 161.8 116 71.6
TAR629G1587 Trochodendron aralioides HOM05D004236 ORTHO05D004903 3.2e-38 161.8 115 69.6
MELO3C020314.2 Cucumis melo HOM05D004236 ORTHO05D004903 4.2e-38 161.4 118 70.3
PSO017G0657 Papaver somniferum HOM05D004236 ORTHO05D004903 7.2e-38 160.6 116 69.8
Sopen03g007300 Solanum pennellii HOM05D004236 ORTHO05D004903 7.2e-38 160.6 115 71.3
ATR0326G065 Amborella trichopoda HOM05D004236 ORTHO05D004903 1.2e-37 159.8 115 69.6
BcaB03g15254 Brassica carinata HOM05D004236 ORTHO05D004903 1.2e-37 159.8 117 67.5
MBI16_g21181_MAGBIO Magnolia biondii HOM05D004236 ORTHO05D004903 1.6e-37 159.5 115 69.6
BcaC08g46105 Brassica carinata HOM05D004236 ORTHO05D004903 2.7e-37 158.7 117 66.7
Potri.015G062400 Populus trichocarpa HOM05D004236 ORTHO05D004903 2.7e-37 158.7 117 71.8
Sed0018742 Sechium edule HOM05D004236 ORTHO05D004903 2.7e-37 158.7 118 70.3
PSO478G1960 Papaver somniferum HOM05D004236 ORTHO05D004903 4.7e-37 157.9 116 69.0
Aqoxy3G00154 Aquilegia oxysepala HOM05D004236 ORTHO05D004903 7.9e-37 157.1 115 71.3
C06p39930 Brassica napus HOM05D004236 ORTHO05D004903 7.9e-37 157.1 117 66.7
EL10Ac2g04514 Beta vulgaris HOM05D004236 ORTHO05D004903 1.0e-36 156.8 121 66.9
BolC6t39081H Brassica oleracea HOM05D004236 ORTHO05D004903 1.0e-36 156.8 116 66.4
BraA07t30978Z Brassica rapa HOM05D004236 ORTHO05D004903 1.0e-36 156.8 116 66.4
PGR042G2451 Punica granatum HOM05D004236 ORTHO05D004903 1.0e-36 156.8 118 69.5
Sed0017902 Sechium edule HOM05D004236 ORTHO05D004903 1.0e-36 156.8 118 69.5
A07p33520 Brassica napus HOM05D004236 ORTHO05D004903 1.4e-36 156.4 116 66.4
Hund13695 Selenicereus undatus HOM05D004236 ORTHO05D004903 1.4e-36 156.4 122 68.0
Sc11g0008520 Simmondsia chinensis HOM05D004236 ORTHO05D004903 3.0e-36 155.2 121 70.2
DCAR_021451 Daucus carota HOM05D004236 ORTHO05D004903 1.1e-35 153.3 109 72.5
AUR62023259 Chenopodium quinoa HOM05D004236 ORTHO05D004903 2.0e-35 152.5 121 66.9
Duzib133G1178 Durio zibethinus HOM05D004236 ORTHO05D004903 2.0e-35 152.5 127 64.6
CARHR058730 Cardamine hirsuta HOM05D004236 ORTHO05D004903 2.6e-35 152.1 121 64.5
BcaB06g28281 Brassica carinata HOM05D004236 ORTHO05D004903 4.4e-35 151.4 117 65.0
THA.LOC104822507 Tarenaya hassleriana HOM05D004236 ORTHO05D004903 4.4e-35 151.4 117 66.7
BcaB08g34729 Brassica carinata HOM05D000498 ORTHO05D000354 5.7e-35 151.0 117 64.1
AUR62023213 Chenopodium quinoa HOM05D004236 ORTHO05D004903 5.7e-35 151.0 121 66.1
Duzib138G1869 Durio zibethinus HOM05D004236 ORTHO05D004903 7.4e-35 150.6 123 65.9
Thecc.04G125200 Theobroma cacao HOM05D004236 ORTHO05D004903 1.1e-33 146.7 123 62.6
COL.COLO4_27143 Corchorus olitorius HOM05D004236 ORTHO05D004903 1.4e-33 146.4 122 61.5
Gohir.D11G173300 Gossypium hirsutum HOM05D004236 ORTHO05D004903 4.1e-33 144.8 122 63.1
Gorai.007G185600 Gossypium raimondii HOM05D004236 ORTHO05D004903 4.1e-33 144.8 122 63.1
Gohir.A11G167000 Gossypium hirsutum HOM05D004236 ORTHO05D004903 7.0e-33 144.1 122 63.1
GSVIVG01011790001 Vitis vinifera HOM05D004236 ORTHO05D004903 7.0e-33 144.1 118 61.9
Lalb_Chr17g0336021 Lupinus albus HOM05D004236 ORTHO05D004903 1.2e-32 143.3 117 63.2
Thhalv10018777m.g Eutrema salsugineum HOM05D004236 ORTHO05D004903 3.5e-32 141.7 122 59.0
Ah.16g101430 Amaranthus hybridus HOM05D004236 ORTHO05D004903 4.5e-32 141.4 117 65.8
CAN.G625.68 Capsicum annuum HOM05D004236 ORTHO05D004903 1.0e-31 140.2 86 82.6
Sp5g21620 Schrenkiella parvula HOM05D004236 ORTHO05D004903 1.0e-31 140.2 121 59.5
Solyc03g034415.1 Solanum lycopersicum HOM05D004236 ORTHO05D004903 1.0e-31 140.2 101 71.3
Lj2A437T35 Lonicera japonica HOM05D004236 ORTHO05D004903 1.1e-30 136.7 193 45.6
Carub.0002s1288 Capsella rubella HOM05D004236 ORTHO05D004903 1.9e-30 136.0 123 58.5
AT1G66680 Arabidopsis thaliana HOM05D004236 ORTHO05D004903 2.5e-30 135.6 124 58.1
CDE04G0933 Ceratophyllum demersum HOM05D004236 ORTHO05D004903 7.2e-30 134.0 116 61.2
AL2G24640 Arabidopsis lyrata HOM05D004236 ORTHO05D004903 1.6e-29 132.9 124 57.3
Mapoly0105s0009 Marchantia polymorpha HOM05D004236 ORTHO05D004903 1.4e-28 129.8 117 59.8
Gohir.D07G079800 Gossypium hirsutum HOM05D004236 ORTHO05D004903 2.3e-28 129.0 102 65.7
Gorai.001G084600 Gossypium raimondii HOM05D004236 ORTHO05D004903 2.3e-28 129.0 102 65.7
MBI10_g41074_MAGBIO Magnolia biondii HOM05D004236 ORTHO05D004903 4.4e-27 124.8 107 57.0
Gohir.A07G075300 Gossypium hirsutum HOM05D004236 ORTHO05D004903 5.7e-27 124.4 102 63.7
Nitab4.5_0005700g0030 Nicotiana tabacum HOM05D004236 ORTHO05D004903 4.1e-25 118.2 115 57.4
Zm00001eb156450 Zea mays HOM05D004236 ORTHO05D004903 7.0e-25 117.5 135 45.9
HPP92_027367 Vanilla planifolia HOM05D000680 ORTHO05D000738 2.2e-23 112.5 119 52.1
Pp3c15_25630 Physcomitrium patens HOM05D004236 ORTHO05D004903 6.5e-23 110.9 123 52.0
BcaB01g01715 Brassica carinata HOM05D004236 ORTHO05D004903 1.8e-20 102.8 90 63.3
HPP92_023117 Vanilla planifolia HOM05D004236 ORTHO05D004903 6.8e-20 100.9 121 51.2
Nitab4.5_0000625g0030 Nicotiana tabacum HOM05D004236 ORTHO05D004903 2.0e-19 99.4 72 70.8
Nitab4.5_0000901g0080 Nicotiana tabacum HOM05D004236 ORTHO05D000001 2.6e-19 99.0 78 65.4
Nitab4.5_0000901g0060 Nicotiana tabacum HOM05D004236 ORTHO05D004903 1.3e-18 96.7 70 71.4
Zm00001eb334840 Zea mays HOM05D004236 ORTHO05D004903 2.0e-16 89.4 136 44.1
TWI77G0072 Tripterygium wilfordii HOM05D004236 ORTHO05D004903 4.2e-14 81.6 76 59.2
Os01g0121100 Oryza sativa ssp. japonica HOM05D004236 ORTHO05D004903 7.2e-14 80.9 147 38.8
Potri.012G068550 Populus trichocarpa HOM05D004236 ORTHO05D004903 7.2e-14 80.9 80 62.5
Actinidia13574 Actinidia chinensis HOM05D004236 ORTHO05D004903 9.4e-14 80.5 75 60.0
SMO340G0155 Selaginella moellendorffii HOM05D004236 ORTHO05D004903 1.2e-13 80.1 90 50.0
CsaV3_3G017790 Cucumis sativus L. HOM05D004236 ORTHO05D004903 5.2e-12 74.7 38 81.6
CBR_g26148 Chara braunii HOM05D004236 ORTHO05D004903 8.8e-12 73.9 91 47.3
SHI07812 Sapria himalayana HOM05D004236 ORTHO05D004903 4.1e-09 65.1 75 50.7
SHI07811 Sapria himalayana HOM05D004236 ORTHO05D004903 3.5e-08 62.0 43 60.5
THA.LOC104822473 Tarenaya hassleriana HOM05D004236 ORTHO05D004903 4.5e-08 61.6 29 82.8
unitig_736.g22563 Utricularia gibba HOM05D004236 ORTHO05D004903 4.2e-06 55.1 48 56.2


User provided reference genes

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