Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 4.5e-165 584.7 340 100.0
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 2.4e-49 200.3 336 49.1
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 2.2e-47 193.7 354 51.4
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 2.2e-42 177.2 328 44.8
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 1.4e-41 174.5 322 40.4
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 4.5e-40 169.5 373 41.8
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 1.0e-39 168.3 333 39.0
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 7.2e-38 162.2 352 40.6
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 1.2e-37 161.4 362 39.2
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 2.7e-37 160.2 282 45.7
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 2.7e-37 160.2 290 43.1
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.3e-36 157.1 332 40.1
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 3.0e-36 156.8 316 42.1
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 8.8e-36 155.2 345 37.7
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 1.5e-35 154.5 344 45.1
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 4.4e-35 152.9 324 42.6
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 7.5e-35 152.1 342 45.9
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 1.7e-34 151.0 342 44.7
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.8e-34 150.2 337 40.7
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 3.7e-34 149.8 338 39.6
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 6.3e-34 149.1 337 42.1
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 8.3e-34 148.7 344 39.5
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 3.1e-33 146.7 351 39.9
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 7.0e-33 145.6 344 39.8
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 7.0e-33 145.6 339 40.7
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 9.1e-33 145.2 376 38.6
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 3.5e-32 143.3 344 43.3
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 3.5e-32 143.3 325 44.0
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 4.5e-32 142.9 344 42.4
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 5.9e-32 142.5 343 43.1
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 1.1e-30 138.3 349 40.1
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 1.6e-29 134.4 358 39.4
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.1e-29 134.0 352 37.2
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 2.8e-29 133.7 337 38.6
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 3.6e-29 133.3 342 36.5
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 3.6e-29 133.3 345 42.3
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 6.1e-29 132.5 308 39.9
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 8.0e-29 132.1 348 41.4
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 1.4e-28 131.3 347 42.7
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 1.8e-28 131.0 347 36.6
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 1.2e-27 128.3 351 35.0
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.2e-27 128.3 308 39.0
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 2.6e-27 127.1 346 35.5
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 3.4e-27 126.7 345 40.0
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 5.7e-27 125.9 315 36.2
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 5.7e-27 125.9 329 40.1
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 5.7e-27 125.9 334 36.5
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 5.7e-27 125.9 343 39.9
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 3.7e-26 123.2 354 36.7
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 4.9e-26 122.9 331 37.8
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 6.4e-26 122.5 344 35.2
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 8.3e-26 122.1 317 32.8
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 8.3e-26 122.1 351 35.0
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.1e-25 121.7 348 37.4
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 1.4e-25 121.3 334 34.1
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 1.8e-25 120.9 352 34.7
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 1.8e-25 120.9 394 38.8
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.4e-25 120.6 348 36.8
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 2.4e-25 120.6 356 37.1
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 4.1e-25 119.8 344 41.9
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 7.0e-25 119.0 339 34.2
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 9.2e-25 118.6 329 40.4
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 1.2e-24 118.2 351 38.2
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 3.5e-24 116.7 347 36.9
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 3.5e-24 116.7 349 31.5
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 4.6e-24 116.3 349 35.5
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 1.0e-23 115.2 347 34.9
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 1.7e-23 114.4 334 37.1
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 3.0e-23 113.6 351 35.6
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 6.6e-23 112.5 348 36.8
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 8.6e-23 112.1 313 37.4
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 1.1e-22 111.7 346 35.3
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 1.9e-22 110.9 345 35.1
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 4.3e-22 109.8 334 35.0
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 7.3e-22 109.0 290 33.1
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 9.5e-22 108.6 351 36.5
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 9.5e-22 108.6 338 35.8
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 1.2e-21 108.2 348 33.9
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 2.1e-21 107.5 345 34.5
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 2.1e-21 107.5 340 34.7
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 2.8e-21 107.1 341 36.1
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 4.7e-21 106.3 343 38.5
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 6.2e-21 105.9 359 32.6
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 6.2e-21 105.9 297 41.1
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 8.0e-21 105.5 341 28.7
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 1.0e-20 105.1 320 36.2
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 1.4e-20 104.8 356 33.7
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 1.8e-20 104.4 327 33.9
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 2.3e-20 104.0 354 37.0
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 5.2e-20 102.8 344 34.6
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 8.9e-20 102.1 341 33.4
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 8.9e-20 102.1 345 35.7
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 3.4e-19 100.1 331 38.1
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 1.3e-18 98.2 348 33.3
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 1.4e-17 94.7 352 33.0
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 4.1e-17 93.2 330 28.2
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 5.4e-17 92.8 332 32.5
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 5.4e-17 92.8 352 32.4
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 1.6e-16 91.3 311 34.1
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 2.7e-16 90.5 341 31.4
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 7.8e-16 89.0 65 66.2
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 3.9e-15 86.7 68 63.2
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 3.9e-15 86.7 63 68.3
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 3.9e-15 86.7 348 31.6
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 6.6e-15 85.9 65 64.6
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 8.6e-15 85.5 105 55.2
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.5e-14 84.7 322 27.3
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 1.9e-14 84.3 63 66.7
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 3.1e-12 77.0 60 65.0
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 4.9e-10 69.7 272 32.4
Nitab4.5_0006082g0010 Nicotiana tabacum HOM05D015166 ORTHO05D015285 1.1e-09 68.6 69 47.8
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 1.9e-09 67.8 354 24.0
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 4.1e-09 66.6 315 31.4
Nitab4.5_0000027g0140 Nicotiana tabacum HOM05D015166 ORTHO05D015285 4.1e-09 66.6 73 43.8
Rhsim10G0117900 Rhododendron simsii HOM05D004844 ORTHO05D006036 4.1e-09 66.6 95 49.5
Nitab4.5_0000027g0150 Nicotiana tabacum HOM05D015166 ORTHO05D015285 1.2e-08 65.1 73 42.5
PGSC0003DMG400043194 Solanum tuberosum HOM05D015166 ORTHO05D015285 7.8e-08 62.4 52 55.8
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.3e-07 61.6 63 47.6
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 5.1e-07 59.7 284 32.0
Aqoxy3G03724 Aquilegia oxysepala HOM05D023566 ORTHO05D019676 2.5e-06 57.4 65 46.2
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 5.6e-06 56.2 422 26.1
DCAR_023743 Daucus carota HOM05D008780 ORTHO05D010894 5.6e-06 56.2 53 54.7
PGSC0003DMG400028354 Solanum tuberosum HOM05D015166 ORTHO05D015285 5.6e-06 56.2 53 50.9
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 5.6e-06 56.2 92 42.4


User provided reference genes

Program Settings