Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048000.1 Olea europaea HOM05D005642 ORTHO05D006672 1.7e-163 579.3 309 100.0
MSTRG.25774 Avicennia marina HOM05D005642 ORTHO05D006672 9.8e-58 228.0 371 41.8
Migut.A00441 Erythranthe guttata HOM05D005642 ORTHO05D006672 2.2e-49 200.3 373 39.1
Migut.E01422 Erythranthe guttata HOM05D005642 ORTHO05D006672 3.5e-47 193.0 343 40.5
SalBow8G4661 Salvia bowleyana HOM05D005642 ORTHO05D006672 1.9e-45 187.2 374 36.4
SalBow4G3316 Salvia bowleyana HOM05D005642 ORTHO05D006672 8.6e-38 161.8 217 45.6
CSS0029793 Camellia sinensis var. sinensis HOM05D005642 ORTHO05D006672 1.2e-36 157.9 399 36.3
Dinv03494 Davidia involucrata HOM05D005642 ORTHO05D006672 2.1e-36 157.1 385 38.7
SGA_v2.0_scaffold27G11668 Striga asiatica HOM05D005642 ORTHO05D006672 6.2e-36 155.6 370 33.5
Hma1.2p1_0379F.1_g139820 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 2.6e-34 150.2 364 35.2
Oeu014127.1 Olea europaea HOM05D005642 ORTHO05D006672 2.2e-33 147.1 307 38.1
Actinidia06420 Actinidia chinensis HOM05D005642 ORTHO05D006672 6.4e-33 145.6 406 32.3
FAN27G2209 Fragaria x ananassa HOM05D005642 ORTHO05D006672 3.2e-32 143.3 360 35.3
FAN20G1085 Fragaria x ananassa HOM05D005642 ORTHO05D006672 5.4e-32 142.5 357 36.7
Lj1g0005947 Lotus japonicus HOM05D005642 ORTHO05D006672 3.5e-31 139.8 367 33.5
Oeu019279.2 Olea europaea HOM05D005642 ORTHO05D006672 4.6e-31 139.4 565 29.0
RcHm_v2.0_Chr6g0304881 Rosa chinensis HOM05D005642 ORTHO05D006672 3.0e-30 136.7 371 35.3
Prupe.1G460900 Prunus persica HOM05D005642 ORTHO05D006672 6.6e-30 135.6 380 35.3
FAN15G2732 Fragaria x ananassa HOM05D005642 ORTHO05D006672 3.3e-29 133.3 343 35.0
Phvul.009G100600 Phaseolus vulgaris HOM05D005642 ORTHO05D006672 5.6e-29 132.5 382 34.8
Lalb_Chr23g0269061 Lupinus albus HOM05D005642 ORTHO05D006672 1.6e-28 131.0 372 33.6
Cc11_g04340 Coffea canephora HOM05D005642 ORTHO05D006672 2.8e-28 130.2 369 35.2
Glyma.06G075900 Glycine max HOM05D005642 ORTHO05D006672 6.2e-28 129.0 376 33.2
FvH4_2g36900 Fragaria vesca HOM05D005642 ORTHO05D006672 8.1e-28 128.6 362 35.1
CANSAT78G0024 Cannabis sativa HOM05D005642 ORTHO05D006672 4.0e-27 126.3 367 33.5
Lalb_Chr11g0064111 Lupinus albus HOM05D005642 ORTHO05D006672 8.9e-27 125.2 362 30.9
VMungo1309G0073 Vigna mungo HOM05D005642 ORTHO05D006672 2.0e-26 124.0 371 33.4
Peaxi162Scf00045g01740 Petunia axillaris HOM05D005642 ORTHO05D006672 4.4e-26 122.9 331 32.3
Lsat_1_v5_gn_5_61101 Lactuca sativa HOM05D005642 ORTHO05D006672 7.5e-26 122.1 247 37.2
GSVIVG01035528001 Vitis vinifera HOM05D005642 ORTHO05D006672 1.7e-25 120.9 381 34.6
CAN.G673.14 Capsicum annuum HOM05D005642 ORTHO05D006672 2.2e-25 120.6 331 32.6
THA.LOC104803598 Tarenaya hassleriana HOM05D005642 ORTHO05D006672 4.9e-25 119.4 369 29.5
Haze_21725 Corylus avellana HOM05D005642 ORTHO05D006672 6.4e-25 119.0 342 33.6
CsaV3_3G047060 Cucumis sativus L. HOM05D005642 ORTHO05D006672 1.1e-24 118.2 322 33.9
arahy.Tifrunner.gnm1.ann1.4FD105 Arachis hypogaea HOM05D005642 ORTHO05D006672 1.4e-24 117.9 387 31.0
Ca_15671_v3 Cicer arietinum L. HOM05D005642 ORTHO05D006672 1.4e-24 117.9 383 31.3
Cfa013263 Carpinus fangiana HOM05D005642 ORTHO05D006672 1.9e-24 117.5 253 34.8
Thhalv10024763m.g Eutrema salsugineum HOM05D005642 ORTHO05D006672 2.4e-24 117.1 297 33.7
Carub.0007s0913 Capsella rubella HOM05D005642 ORTHO05D006672 5.4e-24 115.9 331 32.0
HanXRQChr17g0538601 Helianthus annuus HOM05D005642 ORTHO05D006672 5.4e-24 115.9 352 33.2
ECA246G0678 Erigeron canadensis HOM05D005642 ORTHO05D006672 7.1e-24 115.5 379 32.2
Psat5g024120 Pisum sativum HOM05D005642 ORTHO05D006672 7.1e-24 115.5 363 32.5
QL12p025051 Quercus lobata HOM05D005642 ORTHO05D006672 9.2e-24 115.2 345 34.5
ClCG05G017540 Citrullus lanatus HOM05D005642 ORTHO05D006672 1.2e-23 114.8 367 31.6
BraA08t33825Z Brassica rapa HOM05D005642 ORTHO05D006672 2.1e-23 114.0 297 33.3
arahy.Tifrunner.gnm1.ann1.KDL0BF Arachis hypogaea HOM05D005642 ORTHO05D006672 2.7e-23 113.6 380 32.1
A08p18620 Brassica napus HOM05D005642 ORTHO05D006672 3.5e-23 113.2 297 33.3
MD15G1108600 Malus domestica HOM05D005642 ORTHO05D006672 4.6e-23 112.8 355 33.8
BcaB03g12695 Brassica carinata HOM05D005642 ORTHO05D006672 6.0e-23 112.5 304 32.2
CiPaw.07G213400 Carya illinoinensis HOM05D005642 ORTHO05D006672 6.0e-23 112.5 369 34.1
Ciclev10007752m.g Citrus clementina HOM05D005642 ORTHO05D006672 1.0e-22 111.7 379 31.4
ECA240G1730 Erigeron canadensis HOM05D000542 ORTHO05D006672 1.3e-22 111.3 294 34.0
Nitab4.5_0004131g0010 Nicotiana tabacum HOM05D005642 ORTHO05D006672 1.3e-22 111.3 217 38.2
DCAR_004570 Daucus carota HOM05D005642 ORTHO05D006672 1.7e-22 110.9 375 30.7
Sp7g29290 Schrenkiella parvula HOM05D005642 ORTHO05D006672 1.7e-22 110.9 314 31.8
TAR383G0661 Trochodendron aralioides HOM05D005642 ORTHO05D006672 1.7e-22 110.9 404 30.4
BolC3t21109H Brassica oleracea HOM05D005642 ORTHO05D006672 3.0e-22 110.2 295 32.2
AL7G20630 Arabidopsis lyrata HOM05D005642 ORTHO05D006672 3.9e-22 109.8 320 31.9
BcaC01g01089 Brassica carinata HOM05D005642 ORTHO05D006672 3.9e-22 109.8 295 32.2
A01p06850 Brassica napus HOM05D005642 ORTHO05D006672 3.9e-22 109.8 304 31.6
C03p87980 Brassica napus HOM05D005642 ORTHO05D006672 3.9e-22 109.8 295 32.2
Medtr3g108780 Medicago truncatula HOM05D005642 ORTHO05D006672 3.9e-22 109.8 384 31.0
Sopen08g002430 Solanum pennellii HOM05D005642 ORTHO05D006672 1.5e-21 107.8 349 30.4
BraA01t00636Z Brassica rapa HOM05D005642 ORTHO05D006672 1.9e-21 107.5 304 31.2
PGR044G2675 Punica granatum HOM05D005642 ORTHO05D006672 2.5e-21 107.1 338 29.9
Gohir.A07G001500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 3.3e-21 106.7 364 31.0
Gorai.001G001600 Gossypium raimondii HOM05D005642 ORTHO05D006672 3.3e-21 106.7 367 30.8
Potri.006G275200 Populus trichocarpa HOM05D005642 ORTHO05D006672 3.3e-21 106.7 349 32.4
BcaNung04578 Brassica carinata HOM05D005642 ORTHO05D006672 4.3e-21 106.3 323 31.0
TWI63G0215 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 4.3e-21 106.3 387 32.8
Rhsim09G0061700 Rhododendron simsii HOM05D005642 ORTHO05D006672 1.2e-20 104.8 177 45.2
Solyc08g006480.3 Solanum lycopersicum HOM05D005642 ORTHO05D006672 1.2e-20 104.8 349 30.1
Gohir.D07G001900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 3.6e-20 103.2 364 28.8
Potri.018G006200 Populus trichocarpa HOM05D005642 ORTHO05D006672 4.7e-20 102.8 342 33.0
AT4G31430 Arabidopsis thaliana HOM05D005642 ORTHO05D006672 8.1e-20 102.1 324 29.9
BolC1t00742H Brassica oleracea HOM05D005642 ORTHO05D006672 8.1e-20 102.1 301 29.6
Glyma.04G074900 Glycine max HOM05D005642 ORTHO05D006672 3.1e-19 100.1 240 30.0
Manes.03G003300 Manihot esculenta HOM05D005642 ORTHO05D006672 4.0e-19 99.8 340 33.2
Aa31LG2G18900 Aethionema arabicum HOM05D005642 ORTHO05D006672 5.2e-19 99.4 371 28.8
BcaC09g51922 Brassica carinata HOM05D005642 ORTHO05D006672 5.2e-19 99.4 300 31.0
C01p07620 Brassica napus HOM05D005642 ORTHO05D006672 5.2e-19 99.4 300 31.0
CARHR239310 Cardamine hirsuta HOM05D005642 ORTHO05D006672 5.2e-19 99.4 297 29.6
TWI32G0776 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 1.5e-18 97.8 385 33.5
Sabra06G0213000 Salix brachista HOM05D005642 ORTHO05D006672 1.7e-17 94.4 230 39.6
Sed0007069 Sechium edule HOM05D005642 ORTHO05D006672 2.2e-17 94.0 310 31.6
BcaNung04589 Brassica carinata HOM05D005642 ORTHO05D006672 3.8e-17 93.2 358 27.4
Duzib168G1720 Durio zibethinus HOM05D005642 ORTHO05D006672 3.8e-17 93.2 378 27.2
HanXRQChr13g0412371 Helianthus annuus HOM05D005642 ORTHO05D006672 3.8e-17 93.2 282 30.9
Ah.11g043760 Amaranthus hybridus HOM05D005642 ORTHO05D006672 6.4e-17 92.4 373 30.8
COL.COLO4_19042 Corchorus olitorius HOM05D005642 ORTHO05D006672 4.1e-16 89.7 407 28.3
MELO3C003630.2 Cucumis melo HOM05D005642 ORTHO05D006672 4.1e-16 89.7 253 32.4
Sabra18G0014300 Salix brachista HOM05D005642 ORTHO05D006672 5.4e-16 89.4 308 30.2
Gohir.D05G067500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 1.6e-15 87.8 324 27.5
Gorai.009G068300 Gossypium raimondii HOM05D005642 ORTHO05D006672 2.1e-15 87.4 320 28.4
HanXRQChr03g0082481 Helianthus annuus HOM05D005642 ORTHO05D006672 2.1e-15 87.4 244 33.6
Nn8g40457 Nelumbo nucifera HOM05D005642 ORTHO05D006672 2.7e-15 87.0 403 28.0
Thecc.09G006400 Theobroma cacao HOM05D005642 ORTHO05D006672 2.7e-15 87.0 263 33.1
BraA03t15110Z Brassica rapa HOM05D005642 ORTHO05D006672 3.5e-15 86.7 193 36.8
Hund03285 Selenicereus undatus HOM05D005642 ORTHO05D006672 4.6e-15 86.3 366 30.3
Hma1.2p1_0379F.1_g139825 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 7.8e-15 85.5 117 43.6
AUR62020612 Chenopodium quinoa HOM05D005642 ORTHO05D006672 1.9e-13 80.9 350 29.7
Gohir.A05G064900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 3.3e-13 80.1 317 28.1
unitig_747.g21903 Utricularia gibba HOM05D005642 ORTHO05D006672 7.3e-13 79.0 313 30.0
Aqoxy7G02962 Aquilegia oxysepala HOM05D005642 ORTHO05D006672 1.2e-12 78.2 231 34.6
vmacro00200 Vaccinium macrocarpon HOM05D005642 ORTHO05D006672 2.1e-12 77.4 119 41.2
EL10Ac2g03740 Beta vulgaris HOM05D005642 ORTHO05D006672 1.4e-11 74.7 207 37.7
Lsat_1_v5_gn_3_25461 Lactuca sativa HOM05D005642 ORTHO05D006672 1.8e-11 74.3 313 29.7
Hund19402 Selenicereus undatus HOM05D005642 ORTHO05D006672 2.4e-11 73.9 314 29.3
HPP92_015370 Vanilla planifolia HOM05D005642 ORTHO05D006672 3.1e-11 73.6 252 31.0
SGA_v2.0_scaffold121G33034 Striga asiatica HOM05D005642 ORTHO05D006672 1.7e-09 67.8 192 29.2
Atru.chr7.2632 Acer truncatum HOM05D005642 ORTHO05D006672 3.8e-09 66.6 151 42.4
MBI16_g31790_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 8.4e-09 65.5 263 27.4
MD08G1130500 Malus domestica HOM05D005642 ORTHO05D006672 8.4e-09 65.5 232 27.2
Sc23g0006020 Simmondsia chinensis HOM05D005642 ORTHO05D006672 1.4e-08 64.7 193 29.5
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 1.9e-08 64.3 150 38.0
MBI14_g08146_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 2.4e-08 63.9 297 25.6
unitig_0.g2822 Utricularia gibba HOM05D005642 ORTHO05D006672 4.2e-08 63.2 59 55.9
Cpa.g.sc23.5 Carica papaya HOM05D005642 ORTHO05D006672 7.1e-08 62.4 192 33.9
Eucgr.C04006 Eucalyptus grandis HOM05D005642 ORTHO05D006672 9.3e-08 62.0 286 27.6
Nitab4.5_0000555g0260 Nicotiana tabacum HOM05D005642 ORTHO05D006672 1.2e-07 61.6 166 30.1
Atru.chr7.2633 Acer truncatum HOM05D005642 ORTHO05D006672 3.5e-07 60.1 97 43.3
DCAR_000668 Daucus carota HOM05D005642 ORTHO05D006672 3.5e-07 60.1 373 24.4
PSO170G3270 Papaver somniferum HOM05D005642 ORTHO05D006672 7.8e-07 58.9 339 26.3


User provided reference genes

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