Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 2.0e-158 562.4 290 100.0
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 2.3e-29 133.7 144 54.9
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 6.0e-25 119.0 137 50.4
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 7.8e-25 118.6 138 50.7
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 1.9e-23 114.0 163 46.0
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 2.5e-23 113.6 138 49.3
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 9.6e-23 111.7 141 48.9
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 3.6e-22 109.8 155 43.2
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 4.7e-22 109.4 155 43.2
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 4.7e-22 109.4 154 44.2
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 8.1e-22 108.6 157 43.3
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 8.1e-22 108.6 156 43.6
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 1.8e-21 107.5 152 44.1
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 3.1e-21 106.7 139 47.5
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 5.2e-21 105.9 214 38.8
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 5.2e-21 105.9 168 41.1
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 6.9e-21 105.5 161 42.9
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 1.2e-20 104.8 152 46.1
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.5e-20 104.4 147 43.5
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 1.5e-20 104.4 206 38.3
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.6e-20 103.6 147 43.5
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 3.4e-20 103.2 157 45.9
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 4.4e-20 102.8 153 41.8
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 9.9e-20 101.7 154 42.2
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 1.7e-19 100.9 155 43.9
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 3.8e-19 99.8 154 41.6
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 3.8e-19 99.8 149 41.6
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 3.8e-19 99.8 149 41.6
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 4.9e-19 99.4 154 41.6
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 4.9e-19 99.4 148 43.9
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 4.9e-19 99.4 149 41.6
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 6.4e-19 99.0 144 45.1
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 8.4e-19 98.6 156 40.4
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 1.1e-18 98.2 141 44.0
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 1.1e-18 98.2 147 44.2
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 1.4e-18 97.8 149 39.6
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.4e-18 97.8 144 45.1
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 1.4e-18 97.8 158 39.9
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 3.2e-18 96.7 150 39.3
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 4.2e-18 96.3 145 42.8
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 4.2e-18 96.3 156 41.7
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 7.1e-18 95.5 148 43.2
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 7.1e-18 95.5 153 42.5
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 7.1e-18 95.5 161 41.0
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 7.1e-18 95.5 162 40.7
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 1.2e-17 94.7 155 42.6
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 1.2e-17 94.7 162 38.9
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 1.6e-17 94.4 150 42.7
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 3.5e-17 93.2 151 41.7
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 6.0e-17 92.4 148 40.5
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 7.8e-17 92.0 155 40.6
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.0e-16 91.7 87 56.3
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 1.0e-16 91.7 148 39.9
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 1.3e-16 91.3 150 41.3
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 1.7e-16 90.9 146 42.5
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 2.3e-16 90.5 156 39.7
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 3.9e-16 89.7 138 42.0
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 5.1e-16 89.4 205 34.6
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 5.1e-16 89.4 88 53.4
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 8.7e-16 88.6 146 40.4
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 1.1e-15 88.2 132 41.7
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 1.1e-15 88.2 132 41.7
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 1.1e-15 88.2 148 39.9
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 1.5e-15 87.8 157 41.4
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 1.5e-15 87.8 151 39.7
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 1.5e-15 87.8 139 41.0
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 4.3e-15 86.3 144 41.0
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 5.6e-15 85.9 152 38.2
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 7.3e-15 85.5 148 39.2
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 7.3e-15 85.5 148 39.2
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 7.3e-15 85.5 139 42.4
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 7.3e-15 85.5 144 41.0
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 9.6e-15 85.1 153 36.6
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 9.6e-15 85.1 148 38.5
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 9.6e-15 85.1 140 42.1
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 2.1e-14 84.0 156 37.8
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 2.8e-14 83.6 156 38.5
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 3.6e-14 83.2 76 51.3
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 3.6e-14 83.2 144 41.7
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 6.2e-14 82.4 144 38.9
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 8.1e-14 82.0 93 51.6
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 8.1e-14 82.0 134 37.3
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 1.1e-13 81.6 153 38.6
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 1.8e-13 80.9 79 55.7
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 2.4e-13 80.5 148 37.8
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 2.4e-13 80.5 148 37.8
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 2.4e-13 80.5 148 37.8
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 2.4e-13 80.5 77 54.5
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 3.1e-13 80.1 146 34.9
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 3.1e-13 80.1 146 35.6
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 2.6e-12 77.0 71 53.5
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 2.6e-12 77.0 150 36.0
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 2.6e-12 77.0 139 38.1
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 7.6e-12 75.5 159 37.1
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 1.7e-11 74.3 154 37.0
Oeu054852.1 Olea europaea HOM05D029869 ORTHO05D008640 2.4e-10 70.5 38 92.1
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 3.2e-10 70.1 152 34.9
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 5.4e-10 69.3 138 34.8
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 3.5e-09 66.6 144 34.7
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 4.6e-09 66.2 129 35.7
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 1.5e-07 61.2 59 50.8
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 3.3e-07 60.1 157 31.8
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 7.4e-07 58.9 99 44.4
Oeu008618.1 Olea europaea HOM05D020296 ORTHO05D008640 2.1e-06 57.4 139 34.5
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 8.1e-06 55.5 145 33.8


User provided reference genes

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