Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 1.3e-173 612.8 290 100.0
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 2.0e-68 263.5 273 53.5
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 2.7e-65 253.1 269 49.4
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 3.8e-64 249.2 267 49.4
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 6.5e-64 248.4 266 50.8
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 8.5e-64 248.1 272 50.0
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 1.5e-63 247.3 269 49.8
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 5.5e-63 245.4 270 49.6
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 1.2e-62 244.2 266 49.2
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.2e-62 244.2 248 52.0
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 1.6e-62 243.8 277 50.2
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 2.1e-62 243.4 266 49.2
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 2.8e-62 243.0 267 50.6
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 4.7e-62 242.3 244 52.0
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 4.7e-62 242.3 266 50.0
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 4.7e-62 242.3 268 49.3
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 6.1e-62 241.9 266 49.2
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 2.3e-61 240.0 267 49.8
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 6.8e-61 238.4 253 49.0
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 8.8e-61 238.0 248 52.0
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 2.0e-60 236.9 245 51.4
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 2.6e-60 236.5 266 47.4
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 2.6e-60 236.5 268 47.8
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 2.6e-60 236.5 268 47.8
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 3.4e-60 236.1 285 46.7
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 3.4e-60 236.1 247 49.8
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 5.7e-60 235.3 265 49.4
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 7.5e-60 235.0 270 48.1
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 1.7e-59 233.8 252 49.2
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 2.2e-59 233.4 269 49.8
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 3.7e-59 232.6 244 49.6
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 3.7e-59 232.6 268 49.3
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 3.7e-59 232.6 271 47.6
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 4.9e-59 232.3 268 47.4
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 8.3e-59 231.5 277 45.8
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 1.1e-58 231.1 264 46.2
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 1.1e-58 231.1 266 49.2
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 1.1e-58 231.1 243 50.2
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 1.4e-58 230.7 288 45.8
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 1.4e-58 230.7 272 47.4
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 1.8e-58 230.3 246 48.4
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 2.4e-58 229.9 271 48.3
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 3.1e-58 229.6 266 46.2
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 4.1e-58 229.2 272 47.8
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 4.1e-58 229.2 243 50.2
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 5.4e-58 228.8 246 48.0
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 7.0e-58 228.4 245 49.0
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 9.2e-58 228.0 272 46.7
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 9.2e-58 228.0 244 50.0
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 9.2e-58 228.0 261 45.6
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 1.6e-57 227.3 274 45.3
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 3.5e-57 226.1 245 49.0
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 3.5e-57 226.1 252 47.2
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 4.5e-57 225.7 244 48.4
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 5.9e-57 225.3 269 48.3
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 7.8e-57 224.9 245 48.6
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 7.8e-57 224.9 243 49.4
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 7.8e-57 224.9 247 47.8
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 1.0e-56 224.6 264 44.3
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 1.0e-56 224.6 267 48.7
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 1.3e-56 224.2 267 48.7
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 1.3e-56 224.2 264 48.9
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 1.3e-56 224.2 267 48.3
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 1.7e-56 223.8 267 48.7
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 1.7e-56 223.8 241 49.4
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 2.9e-56 223.0 266 47.4
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 3.8e-56 222.6 269 46.1
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 3.8e-56 222.6 266 46.6
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 5.0e-56 222.2 262 47.3
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 5.0e-56 222.2 267 48.3
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 6.6e-56 221.9 267 48.3
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 8.6e-56 221.5 244 50.4
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.1e-55 221.1 265 46.4
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.1e-55 221.1 266 46.6
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 1.5e-55 220.7 262 46.9
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 3.3e-55 219.5 268 45.9
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 7.3e-55 218.4 267 47.6
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 7.3e-55 218.4 267 47.6
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 7.3e-55 218.4 267 45.3
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 7.3e-55 218.4 267 44.9
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 9.5e-55 218.0 268 47.4
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 1.6e-54 217.2 266 45.9
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 3.6e-54 216.1 270 44.4
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 4.7e-54 215.7 245 46.5
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 6.1e-54 215.3 267 47.2
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 6.1e-54 215.3 267 47.2
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 8.0e-54 214.9 269 44.6
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 1.0e-53 214.5 267 46.4
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 1.0e-53 214.5 264 46.6
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 2.3e-53 213.4 266 45.1
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 5.2e-53 212.2 267 46.8
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 8.9e-53 211.5 267 44.9
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 2.0e-52 210.3 244 47.5
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 2.6e-52 209.9 246 48.4
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 4.4e-52 209.1 268 46.3
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 9.8e-52 208.0 222 49.1
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 2.2e-51 206.8 261 42.1
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 4.1e-50 202.6 269 43.5
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 2.7e-49 199.9 240 45.8
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 5.9e-49 198.7 270 42.2
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 2.3e-48 196.8 240 44.2
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 6.6e-48 195.3 240 45.0
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 4.3e-47 192.6 243 45.3
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 4.3e-47 192.6 246 44.7
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 4.7e-46 189.1 210 49.5
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 3.1e-45 186.4 261 44.4
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 3.1e-45 186.4 237 45.6
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 3.4e-44 183.0 127 68.5
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 5.8e-44 182.2 236 45.3
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 1.3e-43 181.0 132 65.9
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 6.4e-43 178.7 225 44.4
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 5.4e-42 175.6 231 43.7
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 5.4e-42 175.6 250 42.4
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 7.0e-42 175.3 125 66.4
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 9.2e-42 174.9 120 65.0
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 7.8e-41 171.8 130 60.0
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 2.3e-40 170.2 104 71.2
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 2.5e-39 166.8 239 38.1
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 2.1e-38 163.7 229 38.4
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 4.0e-37 159.5 245 41.2
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 6.8e-37 158.7 231 39.0
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 2.1e-33 147.1 115 64.3
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 2.7e-33 146.7 131 53.4
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 1.3e-32 144.4 103 64.1
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 1.3e-32 144.4 104 63.5
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 6.8e-29 132.1 128 52.3
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 3.4e-28 129.8 193 39.9
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 7.1e-26 122.1 71 73.2
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 1.5e-23 114.4 199 33.7
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 6.9e-21 105.5 125 49.6
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 8.4e-19 98.6 172 36.0
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 1.1e-18 98.2 165 36.4
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 1.1e-13 81.6 59 69.5
HPP92_017198 Vanilla planifolia HOM05D005701 ORTHO05D051565 1.1e-13 81.6 50 76.0
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 1.3e-11 74.7 45 75.6
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 2.7e-09 67.0 58 63.8


User provided reference genes

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