Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047795.1 Olea europaea HOM05D003229 ORTHO05D003835 6.0e-49 197.2 101 100.0
PSO339G4047 Papaver somniferum HOM05D003229 ORTHO05D003835 1.3e-14 83.2 61 55.7
PSO384G4356 Papaver somniferum HOM05D003229 ORTHO05D003835 1.3e-14 83.2 61 55.7
Dinv32144 Davidia involucrata HOM05D003229 ORTHO05D003835 6.3e-14 80.9 55 54.5
Lalb_Chr13g0294131 Lupinus albus HOM05D003229 ORTHO05D003835 6.3e-14 80.9 54 59.3
DCAR_012260 Daucus carota HOM05D003229 ORTHO05D003835 1.8e-13 79.3 47 61.7
Nitab4.5_0002498g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 1.8e-13 79.3 53 56.6
Nitab4.5_0010116g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 1.8e-13 79.3 53 56.6
Solyc11g071690.3 Solanum lycopersicum HOM05D003229 ORTHO05D003835 1.8e-13 79.3 52 57.7
CDE05G3619 Ceratophyllum demersum HOM05D003229 ORTHO05D003835 2.4e-13 79.0 51 56.9
Lsat_1_v5_gn_0_39260 Lactuca sativa HOM05D003229 ORTHO05D003835 2.4e-13 79.0 50 60.0
PGSC0003DMG400002995 Solanum tuberosum HOM05D003229 ORTHO05D003835 2.4e-13 79.0 52 57.7
Nitab4.5_0002595g0030 Nicotiana tabacum HOM05D003229 ORTHO05D003835 3.1e-13 78.6 55 56.4
TAR636G2352 Trochodendron aralioides HOM05D003229 ORTHO05D003835 3.1e-13 78.6 53 52.8
Nitab4.5_0000117g0180 Nicotiana tabacum HOM05D003229 ORTHO05D003835 4.1e-13 78.2 55 56.4
Sopen11g029360 Solanum pennellii HOM05D003229 ORTHO05D003835 4.1e-13 78.2 52 57.7
arahy.Tifrunner.gnm1.ann1.B3GIUW Arachis hypogaea HOM05D003229 ORTHO05D003835 5.3e-13 77.8 50 60.0
Potri.016G063800 Populus trichocarpa HOM05D003229 ORTHO05D003835 5.3e-13 77.8 60 53.3
TWI31G0893 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 5.3e-13 77.8 61 54.1
CiPaw.13G105300 Carya illinoinensis HOM05D003229 ORTHO05D003835 7.0e-13 77.4 50 56.0
QL01p018824 Quercus lobata HOM05D003229 ORTHO05D003835 7.0e-13 77.4 49 57.1
TWI79G1121 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 7.0e-13 77.4 61 54.1
arahy.Tifrunner.gnm1.ann1.M286MP Arachis hypogaea HOM05D003229 ORTHO05D003835 9.1e-13 77.0 48 62.5
Gohir.D13G092701 Gossypium hirsutum HOM05D003229 ORTHO05D003835 9.1e-13 77.0 50 58.0
Nitab4.5_0000875g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 9.1e-13 77.0 53 52.8
Nitab4.5_0013078g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 9.1e-13 77.0 53 52.8
Migut.N02427 Erythranthe guttata HOM05D003229 ORTHO05D003835 1.2e-12 76.6 51 51.0
HanXRQChr05g0137001 Helianthus annuus HOM05D003229 ORTHO05D003835 1.2e-12 76.6 60 55.0
Peaxi162Scf01091g00018 Petunia axillaris HOM05D003229 ORTHO05D003835 1.2e-12 76.6 52 55.8
ECA238G1805 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-12 76.3 43 67.4
Lalb_Chr17g0347381 Lupinus albus HOM05D003229 ORTHO05D003835 1.6e-12 76.3 48 62.5
AL5G21420 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 2.0e-12 75.9 45 64.4
AL5G21520 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 2.0e-12 75.9 45 64.4
AT3G43590 Arabidopsis thaliana HOM05D003229 ORTHO05D003835 2.0e-12 75.9 45 64.4
CARHR267130 Cardamine hirsuta HOM05D003229 ORTHO05D003835 2.0e-12 75.9 45 62.2
MELO3C017380.2 Cucumis melo HOM05D003229 ORTHO05D003835 2.0e-12 75.9 47 57.4
Gohir.A13G086615 Gossypium hirsutum HOM05D003229 ORTHO05D003835 2.0e-12 75.9 50 56.0
Gorai.010G139700 Gossypium raimondii HOM05D003229 ORTHO05D003835 2.0e-12 75.9 50 56.0
Hma1.2p1_0127F.1_g059620 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 2.6e-12 75.5 50 60.0
Nn2g14458 Nelumbo nucifera HOM05D003229 ORTHO05D003835 2.6e-12 75.5 53 56.6
Psat2g023800 Pisum sativum HOM05D003229 ORTHO05D003835 2.6e-12 75.5 41 70.7
Solyc01g056760.3 Solanum lycopersicum HOM05D003229 ORTHO05D003835 3.5e-12 75.1 55 56.4
THA.LOC104799740 Tarenaya hassleriana HOM05D003229 ORTHO05D003835 3.5e-12 75.1 48 64.6
GSVIVG01022494001 Vitis vinifera HOM05D003229 ORTHO05D003835 3.5e-12 75.1 54 57.4
GSVIVG01037516001 Vitis vinifera HOM05D003229 ORTHO05D003835 3.5e-12 75.1 52 51.9
C03p68590 Brassica napus HOM05D003229 ORTHO05D003835 4.5e-12 74.7 45 62.2
BolC3t19117H Brassica oleracea HOM05D003229 ORTHO05D003835 4.5e-12 74.7 45 62.2
BraA06t25329Z Brassica rapa HOM05D003229 ORTHO05D003835 4.5e-12 74.7 45 62.2
TPR.G13300 Trifolium pratense HOM05D003229 ORTHO05D003835 4.5e-12 74.7 48 56.2
Carub.0005s0918 Capsella rubella HOM05D003229 ORTHO05D003835 5.9e-12 74.3 41 65.9
Carub.0005s0931 Capsella rubella HOM05D003229 ORTHO05D003835 5.9e-12 74.3 44 63.6
TPR.G15596 Trifolium pratense HOM05D003229 ORTHO05D003835 5.9e-12 74.3 41 68.3
C03p32850 Brassica napus HOM05D003229 ORTHO05D003835 7.7e-12 73.9 61 52.5
BolC3t15620H Brassica oleracea HOM05D003229 ORTHO05D003835 7.7e-12 73.9 61 52.5
Oeu048812.1 Olea europaea HOM05D003229 ORTHO05D003835 7.7e-12 73.9 48 52.1
Oeu048813.5 Olea europaea HOM05D003229 ORTHO05D003835 7.7e-12 73.9 48 52.1
Sp4g01780 Schrenkiella parvula HOM05D003229 ORTHO05D003835 7.7e-12 73.9 48 58.3
Sp5g17570 Schrenkiella parvula HOM05D003229 ORTHO05D003835 7.7e-12 73.9 45 62.2
TWI74G0877 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 7.7e-12 73.9 46 58.7
A06p22470 Brassica napus HOM05D003229 ORTHO05D003835 1.0e-11 73.6 45 60.0
A06p22530 Brassica napus HOM05D003229 ORTHO05D003835 1.0e-11 73.6 45 60.0
Cpa.g.sc103.35 Carica papaya HOM05D003229 ORTHO05D003835 1.0e-11 73.6 48 58.3
Ciclev10011928m.g Citrus clementina HOM05D003229 ORTHO05D003835 1.0e-11 73.6 47 57.4
A03p27320 Brassica napus HOM05D003229 ORTHO05D003835 1.3e-11 73.2 55 56.4
BraA03t11943Z Brassica rapa HOM05D003229 ORTHO05D003835 1.3e-11 73.2 55 56.4
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 1.3e-11 73.2 41 65.9
Lj2C839T18 Lonicera japonica HOM05D003229 ORTHO05D003835 1.3e-11 73.2 51 54.9
AL7G45170 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 1.7e-11 72.8 49 55.1
Glyma.13G028000 Glycine max HOM05D003229 ORTHO05D003835 1.7e-11 72.8 48 60.4
PGR119G2320 Punica granatum HOM05D003229 ORTHO05D003835 1.7e-11 72.8 46 56.5
Ah.08g222380 Amaranthus hybridus HOM05D003229 ORTHO05D003835 2.2e-11 72.4 42 66.7
CARHR287360 Cardamine hirsuta HOM05D003229 ORTHO05D003835 2.2e-11 72.4 45 60.0
Manes.04G063962 Manihot esculenta HOM05D003229 ORTHO05D003835 2.2e-11 72.4 54 55.6
Phvul.006G006900 Phaseolus vulgaris HOM05D003229 ORTHO05D003835 2.2e-11 72.4 53 50.9
Ca_06127_v3 Cicer arietinum L. HOM05D003229 ORTHO05D003835 2.9e-11 72.0 47 57.4
Hma1.2p1_0218F.1_g092270 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 2.9e-11 72.0 50 54.0
MBI05_g37661_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 2.9e-11 72.0 45 60.0
SGA_v2.0_scaffold16G07545 Striga asiatica HOM05D003229 ORTHO05D003835 2.9e-11 72.0 49 53.1
SGA_v2.0_scaffold82G26251 Striga asiatica HOM05D003229 ORTHO05D003835 2.9e-11 72.0 43 58.1
BcaB01g02976 Brassica carinata HOM05D003229 ORTHO05D003835 3.8e-11 71.6 46 60.9
Cfa010230 Carpinus fangiana HOM05D003229 ORTHO05D003835 3.8e-11 71.6 50 56.0
Cc01_g08150 Coffea canephora HOM05D003229 ORTHO05D003835 3.8e-11 71.6 44 59.1
Duzib177G0022 Durio zibethinus HOM05D003229 ORTHO05D003835 3.8e-11 71.6 43 58.1
Thhalv10020505m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 3.8e-11 71.6 45 60.0
Lj6g0007817 Lotus japonicus HOM05D003229 ORTHO05D003835 3.8e-11 71.6 44 56.8
Thhalv10019590m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 5.0e-11 71.2 45 60.0
Atru.chr3.3041 Acer truncatum HOM05D003229 ORTHO05D003835 6.5e-11 70.9 50 56.0
Aa31LG4G13390 Aethionema arabicum HOM05D003229 ORTHO05D003835 6.5e-11 70.9 48 54.2
SEGI_34455 Sequoiadendron giganteum HOM05D003229 ORTHO05D003835 6.5e-11 70.9 41 61.0
THA.LOC104810972 Tarenaya hassleriana HOM05D003229 ORTHO05D003835 6.5e-11 70.9 41 65.9
Sc21g0006640 Simmondsia chinensis HOM05D003229 ORTHO05D003835 8.5e-11 70.5 47 61.7
VMungo0540G0117 Vigna mungo HOM05D003229 ORTHO05D003835 8.5e-11 70.5 47 55.3
Atru.chr8.1245 Acer truncatum HOM05D003229 ORTHO05D003835 1.1e-10 70.1 40 65.0
AT5G36240 Arabidopsis thaliana HOM05D003229 ORTHO05D003835 1.1e-10 70.1 48 52.1
Sed0028007 Sechium edule HOM05D003229 ORTHO05D003835 1.1e-10 70.1 47 55.3
ECA240G3284 Erigeron canadensis HOM05D003229 ORTHO05D003835 1.5e-10 69.7 49 57.1
Haze_23616 Corylus avellana HOM05D003229 ORTHO05D003835 2.5e-10 68.9 50 54.0
Gohir.A13G089500 Gossypium hirsutum HOM05D003229 ORTHO05D003835 2.5e-10 68.9 48 47.9
Sed0019248 Sechium edule HOM05D003229 ORTHO05D003835 2.5e-10 68.9 45 57.8
Duzib128G1455 Durio zibethinus HOM05D003229 ORTHO05D003835 3.2e-10 68.6 55 49.1
CANSAT54G2724 Cannabis sativa HOM05D003229 ORTHO05D003835 4.2e-10 68.2 41 56.1
BraA09t41117Z Brassica rapa HOM05D003229 ORTHO05D003835 5.5e-10 67.8 45 55.6
BcaC07g41025 Brassica carinata HOM05D003229 ORTHO05D003835 7.2e-10 67.4 45 55.6
A09p57240 Brassica napus HOM05D003229 ORTHO05D003835 7.2e-10 67.4 45 55.6
C08p40280 Brassica napus HOM05D003229 ORTHO05D003835 7.2e-10 67.4 45 55.6
BolC8t51596H Brassica oleracea HOM05D003229 ORTHO05D003835 7.2e-10 67.4 45 55.6
CSS0043544 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 7.2e-10 67.4 45 51.1
COL.COLO4_29455 Corchorus olitorius HOM05D003229 ORTHO05D003835 9.4e-10 67.0 41 58.5
ATR0697G070 Amborella trichopoda HOM05D003229 ORTHO05D003835 1.6e-09 66.2 53 49.1
EL10Ac7g16254 Beta vulgaris HOM05D003229 ORTHO05D003835 1.6e-09 66.2 40 62.5
MBI11_g25050_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 1.6e-09 66.2 68 39.7
AUR62036294 Chenopodium quinoa HOM05D003229 ORTHO05D003835 2.1e-09 65.9 39 61.5
LjContig00564g0024504 Lotus japonicus HOM05D003229 ORTHO05D003835 2.7e-09 65.5 50 52.0
Gohir.D04G093700 Gossypium hirsutum HOM05D003229 ORTHO05D003835 4.7e-09 64.7 40 55.0
AUR62038407 Chenopodium quinoa HOM05D003229 ORTHO05D003835 1.0e-08 63.5 39 61.5
Hund20968 Selenicereus undatus HOM05D003229 ORTHO05D003835 1.0e-08 63.5 39 61.5
CAN.G481.58 Capsicum annuum HOM05D004333 ORTHO05D005363 2.3e-08 62.4 53 45.3
Eucgr.J00598 Eucalyptus grandis HOM05D003229 ORTHO05D003835 2.3e-08 62.4 49 49.0
Gohir.D13G092751 Gossypium hirsutum HOM05D003229 ORTHO05D003835 2.3e-08 62.4 54 42.6
Gorai.010G139800 Gossypium raimondii HOM05D003229 ORTHO05D003835 2.3e-08 62.4 54 42.6
MSTRG.26568 Avicennia marina HOM05D003229 ORTHO05D003835 3.0e-08 62.0 49 42.9
CBR_g8477 Chara braunii HOM05D003229 ORTHO05D000407 4.0e-08 61.6 50 48.0
Gorai.009G396300 Gossypium raimondii HOM05D003229 ORTHO05D003835 4.0e-08 61.6 40 52.5
Thhalv10023543m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 6.7e-08 60.8 45 48.9
Sabra09G0121900 Salix brachista HOM05D003229 ORTHO05D003835 8.8e-08 60.5 52 44.2
Hund15039 Selenicereus undatus HOM05D003229 ORTHO05D003835 8.8e-08 60.5 39 48.7
Thhalv10002930m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 1.1e-07 60.1 45 51.1
CDE01G0204 Ceratophyllum demersum HOM05D003229 ORTHO05D003835 2.6e-07 58.9 51 43.1
ClCG06G014150 Citrullus lanatus HOM05D003229 ORTHO05D003835 3.3e-07 58.5 74 36.5
MSTRG.12405 Avicennia marina HOM05D003229 ORTHO05D003835 4.4e-07 58.2 40 52.5
EL10Ac5g11782 Beta vulgaris HOM05D003229 ORTHO05D003835 7.5e-07 57.4 41 48.8
SGA_v2.0_scaffold392G50668 Striga asiatica HOM05D003229 ORTHO05D003835 1.3e-06 56.6 47 46.8
Prupe.6G179900 Prunus persica HOM05D003229 ORTHO05D003835 2.8e-06 55.5 52 44.2
Ciclev10028298m.g Citrus clementina HOM05D003229 ORTHO05D003835 3.7e-06 55.1 41 51.2
Thhalv10002168m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 4.8e-06 54.7 45 51.1


User provided reference genes

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