Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 1.0e-108 396.7 204 100.0
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 1.4e-28 130.6 117 62.4
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 1.2e-24 117.5 117 62.4
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 6.1e-24 115.2 121 57.9
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 7.9e-24 114.8 123 58.5
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 7.9e-24 114.8 120 59.2
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 1.4e-23 114.0 126 55.6
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 1.8e-23 113.6 120 59.2
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 2.3e-23 113.2 117 55.6
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 3.0e-23 112.8 127 56.7
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 5.2e-23 112.1 142 50.0
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.5e-22 110.5 123 56.9
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 1.5e-22 110.5 134 51.5
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 6.3e-21 105.1 118 53.4
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 1.4e-20 104.0 132 51.5
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 7.0e-20 101.7 123 51.2
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 2.0e-19 100.1 105 61.0
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 2.6e-19 99.8 126 52.4
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 7.7e-19 98.2 115 54.8
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 3.8e-18 95.9 109 55.0
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 3.2e-17 92.8 125 51.2
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 1.2e-16 90.9 112 54.5
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 1.6e-16 90.5 124 51.6
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 2.7e-16 89.7 122 51.6
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 2.7e-16 89.7 122 51.6
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 1.8e-15 87.0 113 48.7
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 3.0e-15 86.3 117 48.7
DCAR_005623 Daucus carota HOM05D007324 ORTHO05D007884 8.8e-15 84.7 115 49.6
vmacro22242 Vaccinium macrocarpon HOM05D007324 ORTHO05D007884 1.2e-14 84.3 85 56.5
Peaxi162Scf00615g00021 Petunia axillaris HOM05D007324 ORTHO05D007884 1.5e-14 84.0 122 50.0
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 9.7e-14 81.3 113 49.6
Actinidia09218 Actinidia chinensis HOM05D007324 ORTHO05D007884 2.2e-13 80.1 113 50.4
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 2.2e-13 80.1 115 48.7
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 8.2e-13 78.2 113 46.0
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 1.4e-12 77.4 87 54.0
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 2.4e-12 76.6 131 43.5
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 2.4e-12 76.6 121 47.1
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 3.1e-12 76.3 120 44.2
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 5.3e-12 75.5 114 43.9
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 5.3e-12 75.5 117 44.4
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 9.1e-12 74.7 102 47.1
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 9.1e-12 74.7 102 47.1
SalBow1G4617 Salvia bowleyana HOM05D007324 ORTHO05D007884 9.1e-12 74.7 126 46.8
SalBow8G4924 Salvia bowleyana HOM05D007324 ORTHO05D007884 9.1e-12 74.7 126 46.8
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 1.2e-11 74.3 114 43.0
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 1.2e-11 74.3 87 52.9
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 2.7e-11 73.2 114 43.0
Nitab4.5_0008428g0010 Nicotiana tabacum HOM05D007324 ORTHO05D007884 2.7e-11 73.2 124 49.2
MBI04_g22943_MAGBIO Magnolia biondii HOM05D007324 ORTHO05D007884 3.5e-11 72.8 102 50.0
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 4.5e-11 72.4 85 52.9
Peaxi162Scf00460g00044 Petunia axillaris HOM05D007324 ORTHO05D007884 4.5e-11 72.4 119 50.4
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 7.7e-11 71.6 117 45.3
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 7.7e-11 71.6 80 53.8
CSS0050429 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 2.2e-10 70.1 117 42.7
DCAR_008279 Daucus carota HOM05D007324 ORTHO05D007884 2.9e-10 69.7 117 47.9
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 3.8e-10 69.3 107 44.9
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 3.8e-10 69.3 115 46.1
Dinv28942 Davidia involucrata HOM05D007324 ORTHO05D007884 5.0e-10 68.9 118 47.5
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 6.5e-10 68.6 80 53.8
Nn6g33613 Nelumbo nucifera HOM05D007324 ORTHO05D007884 8.5e-10 68.2 121 47.9
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 1.1e-09 67.8 118 44.9
Hma1.2p1_0585F.1_g183650 Hydrangea macrophylla HOM05D007324 ORTHO05D007884 3.2e-09 66.2 84 52.4
COL.COLO4_17062 Corchorus olitorius HOM05D007324 ORTHO05D007884 7.2e-09 65.1 146 39.7
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 9.4e-09 64.7 94 48.9
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 9.4e-09 64.7 126 43.7
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 1.2e-08 64.3 117 43.6
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 1.6e-08 63.9 113 43.4
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 2.1e-08 63.5 96 49.0
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 2.1e-08 63.5 141 40.4
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 2.7e-08 63.2 94 50.0
FvH4_5g21820 Fragaria vesca HOM05D031477 ORTHO05D007884 4.7e-08 62.4 117 41.0
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 6.1e-08 62.0 70 52.9
TPR.G29033 Trifolium pratense HOM05D007324 ORTHO05D007884 8.0e-08 61.6 117 43.6
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 1.8e-07 60.5 117 42.7
Aa31LG2G13400 Aethionema arabicum HOM05D007324 ORTHO05D007884 4.0e-07 59.3 122 45.1
FvH4_5g21830 Fragaria vesca HOM05D007324 ORTHO05D007884 4.0e-07 59.3 87 46.0
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 5.2e-07 58.9 119 40.3
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 5.2e-07 58.9 119 40.3
CANSAT21G2393 Cannabis sativa HOM05D007324 ORTHO05D007884 8.8e-07 58.2 126 42.9
FAN18G2652 Fragaria x ananassa HOM05D007324 ORTHO05D007884 3.4e-06 56.2 87 44.8
FAN04G2965 Fragaria x ananassa HOM05D007324 ORTHO05D007884 5.7e-06 55.5 87 43.7
Potri.001G143700 Populus trichocarpa HOM05D007324 ORTHO05D007884 5.7e-06 55.5 121 40.5
Prupe.5G039400 Prunus persica HOM05D007324 ORTHO05D007884 5.7e-06 55.5 52 63.5


User provided reference genes

Program Settings