Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047730.1 Olea europaea HOM05D003768 ORTHO05D004291 4.1e-101 371.3 176 100.0
Oeu024950.1 Olea europaea HOM05D003768 ORTHO05D004291 3.7e-46 188.7 188 53.2
SalBow4G0716 Salvia bowleyana HOM05D003768 ORTHO05D004291 1.2e-31 140.6 169 43.2
SalBow4G1509 Salvia bowleyana HOM05D003768 ORTHO05D004291 7.6e-31 137.9 169 42.6
Lj7A559T90 Lonicera japonica HOM05D003768 ORTHO05D004291 1.3e-30 137.1 186 40.3
Rhsim07G0046300 Rhododendron simsii HOM05D003768 ORTHO05D004291 1.2e-28 130.6 193 40.4
Nitab4.5_0004800g0070 Nicotiana tabacum HOM05D003768 ORTHO05D004291 2.7e-28 129.4 239 36.8
Peaxi162Scf00592g00449 Petunia axillaris HOM05D003768 ORTHO05D004291 1.0e-27 127.5 226 37.2
Cc02_g26400 Coffea canephora HOM05D003768 ORTHO05D004291 1.7e-27 126.7 186 39.2
Dinv37464 Davidia involucrata HOM05D003768 ORTHO05D004291 1.7e-27 126.7 247 33.6
vmacro13588 Vaccinium macrocarpon HOM05D003768 ORTHO05D004291 3.9e-27 125.6 193 36.8
Dinv43973 Davidia involucrata HOM05D003768 ORTHO05D004291 6.6e-27 124.8 233 35.2
Duzib128G0275 Durio zibethinus HOM05D003768 ORTHO05D004291 6.6e-27 124.8 191 37.2
Gorai.007G248900 Gossypium raimondii HOM05D003768 ORTHO05D004291 6.6e-27 124.8 189 36.5
Actinidia31742 Actinidia chinensis HOM05D003768 ORTHO05D004291 1.5e-26 123.6 195 38.5
Cpa.g.sc137.22 Carica papaya HOM05D003768 ORTHO05D004291 3.3e-26 122.5 242 35.1
Gohir.A11G224500 Gossypium hirsutum HOM05D003768 ORTHO05D004291 3.3e-26 122.5 189 36.0
TAR629G2971 Trochodendron aralioides HOM05D003768 ORTHO05D004291 4.3e-26 122.1 232 34.1
Potri.019G044000 Populus trichocarpa HOM05D003768 ORTHO05D004291 5.6e-26 121.7 189 36.5
Thecc.05G232500 Theobroma cacao HOM05D003768 ORTHO05D004291 7.3e-26 121.3 200 35.5
Peaxi162Scf00445g00073 Petunia axillaris HOM05D003768 ORTHO05D004291 2.8e-25 119.4 244 32.8
Gohir.D11G236032 Gossypium hirsutum HOM05D003768 ORTHO05D004291 4.7e-25 118.6 189 36.0
Gorai.007G249000 Gossypium raimondii HOM05D003768 ORTHO05D004291 6.2e-25 118.2 189 36.0
PGR042G1155 Punica granatum HOM05D003768 ORTHO05D004291 6.2e-25 118.2 240 31.7
Sabra16G0138100 Salix brachista HOM05D003768 ORTHO05D004291 6.2e-25 118.2 238 33.6
Duzib106G0525 Durio zibethinus HOM05D003768 ORTHO05D004291 1.4e-24 117.1 189 36.0
Lsat_1_v5_gn_1_85701 Lactuca sativa HOM05D003768 ORTHO05D004291 1.4e-24 117.1 188 33.5
Manes.09G132100 Manihot esculenta HOM05D003768 ORTHO05D004291 1.8e-24 116.7 185 37.8
Nn1g09146 Nelumbo nucifera HOM05D003768 ORTHO05D004291 1.8e-24 116.7 206 34.5
Gohir.A11G224600 Gossypium hirsutum HOM05D003768 ORTHO05D004291 2.4e-24 116.3 241 32.0
MD06G1017400 Malus domestica HOM05D003768 ORTHO05D004291 2.4e-24 116.3 236 33.1
Prupe.5G018500 Prunus persica HOM05D003768 ORTHO05D004291 2.4e-24 116.3 237 31.6
Nitab4.5_0000183g0150 Nicotiana tabacum HOM05D003768 ORTHO05D004291 3.1e-24 115.9 258 31.0
Solyc01g081210.4 Solanum lycopersicum HOM05D003768 ORTHO05D004291 4.0e-24 115.5 247 33.6
PGSC0003DMG400001786 Solanum tuberosum HOM05D003768 ORTHO05D004291 4.0e-24 115.5 253 33.2
COL.COLO4_08515 Corchorus olitorius HOM05D003768 ORTHO05D004291 5.2e-24 115.2 200 33.5
Nitab4.5_0012693g0010 Nicotiana tabacum HOM05D003768 ORTHO05D004291 6.9e-24 114.8 262 30.2
FAN08G0821 Fragaria x ananassa HOM05D003768 ORTHO05D004291 1.2e-23 114.0 243 31.7
TWI34G0103 Tripterygium wilfordii HOM05D003768 ORTHO05D004291 1.2e-23 114.0 211 33.6
Sopen01g032790 Solanum pennellii HOM05D003768 ORTHO05D004291 1.5e-23 113.6 236 33.9
MD06G1017500 Malus domestica HOM05D003768 ORTHO05D004291 2.0e-23 113.2 238 32.8
Manes.04G035600 Manihot esculenta HOM05D003768 ORTHO05D004291 2.0e-23 113.2 232 33.2
PGR042G3024 Punica granatum HOM05D003768 ORTHO05D004291 2.0e-23 113.2 194 36.1
CiPaw.12G072600 Carya illinoinensis HOM05D003768 ORTHO05D004291 2.6e-23 112.8 238 31.9
Gohir.D11G235966 Gossypium hirsutum HOM05D003768 ORTHO05D004291 2.6e-23 112.8 143 40.6
Lalb_Chr16g0380621 Lupinus albus HOM05D003768 ORTHO05D004291 2.6e-23 112.8 187 35.8
MD07G1079500 Malus domestica HOM05D003768 ORTHO05D004291 2.6e-23 112.8 236 32.2
FvH4_5g24190 Fragaria vesca HOM05D003768 ORTHO05D004291 5.8e-23 111.7 242 31.4
FAN18G3693 Fragaria x ananassa HOM05D003768 ORTHO05D004291 5.8e-23 111.7 242 31.4
RcHm_v2.0_Chr7g0213971 Rosa chinensis HOM05D003768 ORTHO05D004291 7.6e-23 111.3 246 32.9
ClCG10G000890 Citrullus lanatus HOM05D003768 ORTHO05D004291 9.9e-23 110.9 236 31.4
Ciclev10031775m.g Citrus clementina HOM05D003768 ORTHO05D004291 9.9e-23 110.9 242 31.8
FAN04G3114 Fragaria x ananassa HOM05D003768 ORTHO05D004291 9.9e-23 110.9 237 32.5
Prupe.2G102300 Prunus persica HOM05D003768 ORTHO05D004291 9.9e-23 110.9 195 34.4
Prupe.2G102400 Prunus persica HOM05D003768 ORTHO05D004291 9.9e-23 110.9 193 34.7
MSTRG.1744 Avicennia marina HOM05D003768 ORTHO05D004291 1.3e-22 110.5 248 31.9
Potri.009G024000 Populus trichocarpa HOM05D003768 ORTHO05D004291 1.3e-22 110.5 201 34.3
QL12p002012 Quercus lobata HOM05D003768 ORTHO05D004291 1.7e-22 110.2 178 35.4
Nitab4.5_0004594g0010 Nicotiana tabacum HOM05D003768 ORTHO05D004291 2.2e-22 109.8 239 33.9
FAN13G1537 Fragaria x ananassa HOM05D003768 ORTHO05D004291 2.9e-22 109.4 242 31.0
MBI04_g30771_MAGBIO Magnolia biondii HOM05D003768 ORTHO05D004291 2.9e-22 109.4 185 37.3
Solyc08g074660.1 Solanum lycopersicum HOM05D003768 ORTHO05D004291 2.9e-22 109.4 233 30.0
Sopen08g023250 Solanum pennellii HOM05D003768 ORTHO05D004291 2.9e-22 109.4 233 30.0
Eucgr.E01206 Eucalyptus grandis HOM05D003768 ORTHO05D004291 4.9e-22 108.6 200 31.5
Sabra09G0015100 Salix brachista HOM05D003768 ORTHO05D004291 4.9e-22 108.6 198 34.3
QL12p002001 Quercus lobata HOM05D003768 ORTHO05D004291 6.4e-22 108.2 178 35.4
QL04p052597 Quercus lobata HOM05D003768 ORTHO05D004291 1.4e-21 107.1 185 36.2
SalBow8G3765 Salvia bowleyana HOM05D003768 ORTHO05D004291 1.4e-21 107.1 196 33.7
CAN.G992.1 Capsicum annuum HOM05D003768 ORTHO05D004291 2.4e-21 106.3 194 35.1
Haze_08000 Corylus avellana HOM05D003768 ORTHO05D004291 2.4e-21 106.3 189 31.7
CiPaw.11G104700 Carya illinoinensis HOM05D003768 ORTHO05D004291 4.2e-21 105.5 197 32.0
PGSC0003DMG400018922 Solanum tuberosum HOM05D003768 ORTHO05D004291 4.2e-21 105.5 233 29.2
Cc00_g02500 Coffea canephora HOM05D003768 ORTHO05D004291 5.4e-21 105.1 217 33.2
MELO3C013784.2 Cucumis melo HOM05D003768 ORTHO05D004291 5.4e-21 105.1 236 30.5
Ca_25082_v3 Cicer arietinum L. HOM05D003768 ORTHO05D004291 7.1e-21 104.8 241 32.4
VMungo1215G3229 Vigna mungo HOM05D003768 ORTHO05D004291 7.1e-21 104.8 189 32.8
Ciclev10001461m.g Citrus clementina HOM05D003768 ORTHO05D004291 9.3e-21 104.4 187 32.6
Lsat_1_v5_gn_8_92780 Lactuca sativa HOM05D003768 ORTHO05D004291 9.3e-21 104.4 197 35.5
Rhsim07G0174300 Rhododendron simsii HOM05D003768 ORTHO05D004291 9.3e-21 104.4 233 30.9
Manes.11G129100 Manihot esculenta HOM05D003768 ORTHO05D004291 1.2e-20 104.0 195 33.8
Phvul.002G126700 Phaseolus vulgaris HOM05D003768 ORTHO05D004291 1.6e-20 103.6 189 32.3
DCAR_000699 Daucus carota HOM05D003768 ORTHO05D004291 4.6e-20 102.1 193 33.7
CSS0032439 Camellia sinensis var. sinensis HOM05D003768 ORTHO05D004291 6.0e-20 101.7 209 31.6
CSS0044447 Camellia sinensis var. sinensis HOM05D003768 ORTHO05D004291 6.0e-20 101.7 209 31.6
Oeu044971.2 Olea europaea HOM05D003768 ORTHO05D004291 6.0e-20 101.7 248 27.8
Glyma.01G150300 Glycine max HOM05D003768 ORTHO05D004291 7.8e-20 101.3 186 31.7
Potri.001G230600 Populus trichocarpa HOM05D003768 ORTHO05D004291 7.8e-20 101.3 191 33.5
TWI60G1022 Tripterygium wilfordii HOM05D003768 ORTHO05D004291 1.0e-19 100.9 207 33.3
Gohir.D11G060700 Gossypium hirsutum HOM05D003768 ORTHO05D004291 1.3e-19 100.5 187 33.2
Gorai.007G065400 Gossypium raimondii HOM05D003768 ORTHO05D004291 1.7e-19 100.1 187 33.2
Peaxi162Scf00045g01323 Petunia axillaris HOM05D003768 ORTHO05D004291 1.7e-19 100.1 215 30.7
Ah.12g056080 Amaranthus hybridus HOM05D003768 ORTHO05D004291 3.0e-19 99.4 199 31.2
arahy.Tifrunner.gnm1.ann1.PR9TQC Arachis hypogaea HOM05D003768 ORTHO05D004291 3.0e-19 99.4 181 31.5
arahy.Tifrunner.gnm1.ann1.RIG8IM Arachis hypogaea HOM05D003768 ORTHO05D004291 3.0e-19 99.4 181 31.5
Atru.chr6.2112 Acer truncatum HOM05D003768 ORTHO05D004291 3.9e-19 99.0 182 36.3
CANSAT33G0001 Cannabis sativa HOM05D003768 ORTHO05D004291 3.9e-19 99.0 186 34.9
Lsat_1_v5_gn_9_8360 Lactuca sativa HOM05D003768 ORTHO05D004291 3.9e-19 99.0 187 35.3
Glyma.09G215301 Glycine max HOM05D003768 ORTHO05D004291 5.1e-19 98.6 186 31.2
Gohir.A11G056500 Gossypium hirsutum HOM05D003768 ORTHO05D004291 5.1e-19 98.6 200 31.5
Hma1.2p1_0268F.1_g107700 Hydrangea macrophylla HOM05D003768 ORTHO05D004291 6.6e-19 98.2 201 32.3
COL.COLO4_16709 Corchorus olitorius HOM05D003768 ORTHO05D004291 8.7e-19 97.8 198 35.9
Thecc.03G324200 Theobroma cacao HOM05D003768 ORTHO05D004291 8.7e-19 97.8 187 33.2
CDE06G0468 Ceratophyllum demersum HOM05D003768 ORTHO05D004291 1.1e-18 97.4 203 33.5
AUR62007434 Chenopodium quinoa HOM05D003768 ORTHO05D004291 1.1e-18 97.4 189 32.3
Lj2g0006522 Lotus japonicus HOM05D003768 ORTHO05D004291 1.1e-18 97.4 187 29.9
Medtr5g026580 Medicago truncatula HOM05D003768 ORTHO05D004291 1.1e-18 97.4 187 33.7
SGA_v2.0_scaffold144G35820 Striga asiatica HOM05D003768 ORTHO05D004291 1.1e-18 97.4 187 31.6
Sed0000266 Sechium edule HOM05D003768 ORTHO05D004291 1.5e-18 97.1 181 32.6
ECA236G1958 Erigeron canadensis HOM05D003768 ORTHO05D004291 1.9e-18 96.7 196 33.7
AL1G49680 Arabidopsis lyrata HOM05D003768 ORTHO05D004291 2.5e-18 96.3 203 30.0
CAN.G195.40 Capsicum annuum HOM05D003768 ORTHO05D004291 3.3e-18 95.9 218 31.7
Migut.A00505 Erythranthe guttata HOM05D003768 ORTHO05D004291 3.3e-18 95.9 195 31.8
HanXRQChr04g0112731 Helianthus annuus HOM05D003768 ORTHO05D004291 3.3e-18 95.9 193 32.6
CDE04G1214 Ceratophyllum demersum HOM05D003768 ORTHO05D004291 5.6e-18 95.1 186 33.3
CsaV3_3G000970 Cucumis sativus L. HOM05D003768 ORTHO05D004291 5.6e-18 95.1 236 29.7
Duzib205G0814 Durio zibethinus HOM05D003768 ORTHO05D004291 7.3e-18 94.7 186 31.7
PSO210G4177 Papaver somniferum HOM05D003768 ORTHO05D004291 7.3e-18 94.7 190 30.5
TPR.G17256 Trifolium pratense HOM05D003768 ORTHO05D004291 9.6e-18 94.4 143 35.7
EL10Ac5g11894 Beta vulgaris HOM05D003768 ORTHO05D004291 2.1e-17 93.2 189 30.7
SGA_v2.0_scaffold4G02215 Striga asiatica HOM05D003768 ORTHO05D004291 2.1e-17 93.2 193 29.5
AT1G31350 Arabidopsis thaliana HOM05D003768 ORTHO05D004291 2.8e-17 92.8 203 29.6
Sc22g0002160 Simmondsia chinensis HOM05D003768 ORTHO05D004291 2.8e-17 92.8 238 28.6
HPP92_002554 Vanilla planifolia HOM05D003768 ORTHO05D004291 2.8e-17 92.8 187 33.2
Carub.0001s2980 Capsella rubella HOM05D003768 ORTHO05D004291 3.6e-17 92.4 203 29.1
Psat2g143160 Pisum sativum HOM05D003768 ORTHO05D004291 8.1e-17 91.3 246 28.9
BcaB04g18159 Brassica carinata HOM05D003768 ORTHO05D004291 1.4e-16 90.5 192 29.2
AUR62027304 Chenopodium quinoa HOM05D003768 ORTHO05D004291 1.4e-16 90.5 189 31.2
Ah.02g117380 Amaranthus hybridus HOM05D003768 ORTHO05D004291 3.1e-16 89.4 189 30.7
CARHR030830 Cardamine hirsuta HOM05D003768 ORTHO05D004291 3.1e-16 89.4 191 28.8
PGSC0003DMG400004468 Solanum tuberosum HOM05D003768 ORTHO05D004291 3.1e-16 89.4 164 31.7
Nitab4.5_0000860g0020 Nicotiana tabacum HOM05D003768 ORTHO05D004291 4.0e-16 89.0 195 28.7
Sopen08g001900 Solanum pennellii HOM05D003768 ORTHO05D004291 5.3e-16 88.6 162 32.7
A08p10610 Brassica napus HOM05D003768 ORTHO05D004291 6.9e-16 88.2 188 28.7
BraA08t33060Z Brassica rapa HOM05D003768 ORTHO05D004291 6.9e-16 88.2 188 28.7
Thhalv10009358m.g Eutrema salsugineum HOM05D003768 ORTHO05D004291 6.9e-16 88.2 188 28.2
vmacro05084 Vaccinium macrocarpon HOM05D003768 ORTHO05D004291 6.9e-16 88.2 107 42.1
Aa31LG2G14560 Aethionema arabicum HOM05D003768 ORTHO05D004291 9.0e-16 87.8 191 30.4
ECA248G3715 Erigeron canadensis HOM05D003768 ORTHO05D004291 1.5e-15 87.0 154 31.2
Nitab4.5_0008438g0040 Nicotiana tabacum HOM05D003768 ORTHO05D004291 2.0e-15 86.7 135 35.6
BraA09t39016Z Brassica rapa HOM05D003768 ORTHO05D004291 3.4e-15 85.9 188 28.7
A09p34840 Brassica napus HOM05D003768 ORTHO05D004291 4.5e-15 85.5 188 28.7
ECA247G1450 Erigeron canadensis HOM05D003768 ORTHO05D004291 7.6e-15 84.7 82 51.2
SGA_v2.0_scaffold121G33042 Striga asiatica HOM05D003768 ORTHO05D004291 7.6e-15 84.7 197 27.9
Aa31LG9G15910 Aethionema arabicum HOM05D003768 ORTHO05D004291 2.9e-14 82.8 189 29.1
BcaC05g27169 Brassica carinata HOM05D003768 ORTHO05D004291 2.9e-14 82.8 188 28.2
BcaC07g37761 Brassica carinata HOM05D003768 ORTHO05D004291 2.9e-14 82.8 192 27.6
C05p30610 Brassica napus HOM05D003768 ORTHO05D004291 2.9e-14 82.8 188 28.2
BolC5t31795H Brassica oleracea HOM05D003768 ORTHO05D004291 2.9e-14 82.8 188 28.2
BolC8t48146H Brassica oleracea HOM05D003768 ORTHO05D004291 2.9e-14 82.8 192 27.6
THA.LOC104814373 Tarenaya hassleriana HOM05D003768 ORTHO05D004291 2.9e-14 82.8 235 27.2
BcaB07g32798 Brassica carinata HOM05D003768 ORTHO05D004291 3.8e-14 82.4 188 27.1
Solyc08g005930.1 Solanum lycopersicum HOM05D003768 ORTHO05D004291 3.8e-14 82.4 159 32.7
CAN.G1914.1 Capsicum annuum HOM05D003768 ORTHO05D004291 3.2e-13 79.3 127 36.2
Sp1g27190 Schrenkiella parvula HOM05D003768 ORTHO05D004291 5.4e-13 78.6 188 27.1
Zm00001eb227720 Zea mays HOM05D003768 ORTHO05D004291 1.2e-12 77.4 107 42.1
HanXRQChr15g0467781 Helianthus annuus HOM05D003768 ORTHO05D004291 1.6e-12 77.0 99 40.4
VMungo0540G1198 Vigna mungo HOM05D003768 ORTHO05D004291 6.0e-12 75.1 90 41.1
Sc22g0002170 Simmondsia chinensis HOM05D003768 ORTHO05D004291 1.8e-11 73.6 99 40.4
Oeu028125.1 Olea europaea HOM05D003768 ORTHO05D004291 3.0e-11 72.8 89 37.1
ATR0829G197 Amborella trichopoda HOM05D003768 ORTHO05D004291 3.9e-11 72.4 183 28.4
Os06g0711700 Oryza sativa ssp. japonica HOM05D003768 ORTHO05D004291 3.9e-11 72.4 147 30.6
AUR62022382 Chenopodium quinoa HOM05D001737 ORTHO05D001735 1.5e-10 70.5 107 33.6
Migut.E01395 Erythranthe guttata HOM05D003768 ORTHO05D004291 3.3e-10 69.3 103 37.9
Sabra19G0054500 Salix brachista HOM05D003768 ORTHO05D004291 1.3e-09 67.4 72 50.0
Actinidia05824 Actinidia chinensis HOM05D003768 ORTHO05D004291 9.0e-08 61.2 58 50.0
Actinidia03561 Actinidia chinensis HOM05D003768 ORTHO05D004291 1.2e-07 60.8 168 29.8
MSTRG.11836 Avicennia marina HOM05D003768 ORTHO05D004291 3.4e-07 59.3 124 31.5
HPP92_002507 Vanilla planifolia HOM05D003768 ORTHO05D004291 1.7e-06 57.0 56 48.2
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 2.9e-06 56.2 70 44.3


User provided reference genes

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