Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047570.1 Olea europaea HOM05D004075 ORTHO05D004538 1.4e-199 699.5 379 100.0
Oeu063166.1 Olea europaea HOM05D004075 ORTHO05D004538 5.9e-166 587.8 384 78.9
Oeu063168.1 Olea europaea HOM05D004075 ORTHO05D004538 5.9e-166 587.8 384 78.9
MSTRG.5020 Avicennia marina HOM05D004075 ORTHO05D004538 3.2e-111 406.0 393 59.0
Cc02_g27890 Coffea canephora HOM05D004075 ORTHO05D004538 3.2e-111 406.0 389 59.1
Migut.O00687 Erythranthe guttata HOM05D004075 ORTHO05D004538 4.5e-105 385.6 402 59.5
MSTRG.28073 Avicennia marina HOM05D004075 ORTHO05D004538 3.2e-103 379.4 394 55.1
Lj9A631T51 Lonicera japonica HOM05D004075 ORTHO05D004538 8.8e-101 371.3 398 54.0
PGSC0003DMG400006871 Solanum tuberosum HOM05D004075 ORTHO05D004538 1.5e-100 370.5 393 56.7
Peaxi162Scf00428g00317 Petunia axillaris HOM05D004075 ORTHO05D004538 3.3e-100 369.4 394 53.6
Dinv43449 Davidia involucrata HOM05D004075 ORTHO05D004538 4.8e-99 365.5 398 53.8
SGA_v2.0_scaffold5G02972 Striga asiatica HOM05D004075 ORTHO05D004538 4.1e-98 362.5 406 53.2
CSS0023689 Camellia sinensis var. sinensis HOM05D004075 ORTHO05D004538 7.7e-97 358.2 401 52.1
CSS0027632 Camellia sinensis var. sinensis HOM05D004075 ORTHO05D004538 7.7e-97 358.2 401 52.1
Hma1.2p1_0293F.1_g116200 Hydrangea macrophylla HOM05D004075 ORTHO05D004538 2.2e-96 356.7 395 54.4
Nitab4.5_0000634g0160 Nicotiana tabacum HOM05D004075 ORTHO05D004538 2.9e-96 356.3 401 52.9
Nitab4.5_0002477g0020 Nicotiana tabacum HOM05D004075 ORTHO05D004538 2.9e-96 356.3 401 52.9
vmacro13660 Vaccinium macrocarpon HOM05D004075 ORTHO05D004538 5.1e-93 345.5 390 50.0
CAN.G1820.5 Capsicum annuum HOM05D004075 ORTHO05D004538 8.8e-93 344.7 397 53.7
Rhsim07G0055100 Rhododendron simsii HOM05D004075 ORTHO05D004538 2.4e-90 336.7 392 51.0
Actinidia21555 Actinidia chinensis HOM05D004075 ORTHO05D004538 9.1e-90 334.7 392 49.2
Dinv09359 Davidia involucrata HOM05D004075 ORTHO05D004538 1.2e-89 334.3 354 54.8
GSVIVG01032083001 Vitis vinifera HOM05D004075 ORTHO05D004538 1.5e-89 334.0 394 50.5
TAR636G2153 Trochodendron aralioides HOM05D004075 ORTHO05D004538 7.2e-87 325.1 402 49.0
Solyc01g087080.4 Solanum lycopersicum HOM05D004075 ORTHO05D004538 9.4e-87 324.7 397 50.6
SalBow8G1917 Salvia bowleyana HOM05D004075 ORTHO05D004538 1.6e-86 323.9 380 52.1
SalBow6G5115 Salvia bowleyana HOM05D004075 ORTHO05D004538 2.7e-86 323.2 380 52.1
QL04p006698 Quercus lobata HOM05D004075 ORTHO05D004538 1.0e-85 321.2 405 49.4
QL04p007893 Quercus lobata HOM05D004075 ORTHO05D004538 1.8e-85 320.5 400 49.2
Sabra09G0045700 Salix brachista HOM05D004075 ORTHO05D004538 4.1e-82 309.3 400 52.0
DCAR_029668 Daucus carota HOM05D004075 ORTHO05D004538 5.3e-82 308.9 411 46.2
Thecc.01G411500 Theobroma cacao HOM05D004075 ORTHO05D004538 5.3e-82 308.9 396 49.2
Actinidia20669 Actinidia chinensis HOM05D004075 ORTHO05D004538 4.5e-81 305.8 381 49.1
TAR633G2155 Trochodendron aralioides HOM05D004075 ORTHO05D004538 5.9e-81 305.4 412 46.6
Eucgr.J01269 Eucalyptus grandis HOM05D004075 ORTHO05D004538 1.7e-80 303.9 404 46.5
ECA240G2351 Erigeron canadensis HOM05D004075 ORTHO05D004538 1.9e-79 300.4 389 47.6
Nn2g15469 Nelumbo nucifera HOM05D004075 ORTHO05D004538 6.1e-78 295.4 432 45.4
TWI53G1782 Tripterygium wilfordii HOM05D004075 ORTHO05D004538 1.8e-77 293.9 394 47.2
vmacro21184 Vaccinium macrocarpon HOM05D004075 ORTHO05D004538 1.5e-76 290.8 384 48.4
Potri.001G267600 Populus trichocarpa HOM05D004075 ORTHO05D004538 2.0e-76 290.4 399 48.6
Manes.10G143700 Manihot esculenta HOM05D004075 ORTHO05D004538 2.6e-76 290.0 397 46.9
HanXRQChr03g0065861 Helianthus annuus HOM05D004075 ORTHO05D004538 5.7e-76 288.9 384 49.2
Sopen01g034160 Solanum pennellii HOM05D004075 ORTHO05D004538 2.2e-75 287.0 325 52.0
Cpa.g.sc245.12 Carica papaya HOM05D004075 ORTHO05D004538 1.8e-74 283.9 395 46.3
Ciclev10031906m.g Citrus clementina HOM05D004075 ORTHO05D004538 1.8e-74 283.9 400 46.5
Lsat_1_v5_gn_9_117060 Lactuca sativa HOM05D004075 ORTHO05D004538 5.3e-74 282.3 380 48.2
Phvul.005G020800 Phaseolus vulgaris HOM05D004075 ORTHO05D004538 1.2e-73 281.2 397 45.1
PGR031G2189 Punica granatum HOM05D004075 ORTHO05D004538 3.8e-72 276.2 401 46.1
MD07G1009400 Malus domestica HOM05D004075 ORTHO05D004538 5.0e-72 275.8 436 39.9
TWI73G1281 Tripterygium wilfordii HOM05D004075 ORTHO05D004538 1.1e-71 274.6 406 44.6
VMungo1080G0731 Vigna mungo HOM05D004075 ORTHO05D004538 4.2e-71 272.7 418 43.3
Prupe.2G012400 Prunus persica HOM05D004075 ORTHO05D004538 7.2e-71 271.9 430 40.9
CANSAT80G2751 Cannabis sativa HOM05D004075 ORTHO05D004538 9.4e-71 271.6 431 44.3
HanXRQChr13g0420751 Helianthus annuus HOM05D004075 ORTHO05D004538 6.1e-70 268.9 381 44.9
MD02G1313000 Malus domestica HOM05D004075 ORTHO05D004538 5.2e-69 265.8 437 39.6
Duzib268G0178 Durio zibethinus HOM05D004075 ORTHO05D004538 4.4e-68 262.7 426 42.0
PSO339G0483 Papaver somniferum HOM05D004075 ORTHO05D004538 4.4e-68 262.7 435 41.1
RcHm_v2.0_Chr1g0315881 Rosa chinensis HOM05D004075 ORTHO05D004538 5.7e-68 262.3 442 39.8
COL.COLO4_23930 Corchorus olitorius HOM05D004075 ORTHO05D004538 1.7e-67 260.8 396 43.7
PSO384G3961 Papaver somniferum HOM05D004075 ORTHO05D004538 2.2e-67 260.4 441 41.5
Haze_03220 Corylus avellana HOM05D004075 ORTHO05D004538 4.8e-67 259.2 386 43.3
Glyma.15G273700 Glycine max HOM05D004075 ORTHO05D004538 6.3e-67 258.8 400 43.0
Atru.chr11.2656 Acer truncatum HOM05D004075 ORTHO05D004538 1.4e-66 257.7 412 43.2
FvH4_7g00980 Fragaria vesca HOM05D004075 ORTHO05D004538 1.8e-66 257.3 434 40.1
Glyma.08G155000 Glycine max HOM05D004075 ORTHO05D004538 7.0e-66 255.4 398 43.5
Lj3g0017759 Lotus japonicus HOM05D004075 ORTHO05D004538 7.0e-66 255.4 397 42.6
arahy.Tifrunner.gnm1.ann1.N8UE6G Arachis hypogaea HOM05D004075 ORTHO05D004538 1.6e-65 254.2 405 42.2
arahy.Tifrunner.gnm1.ann1.J4WSSI Arachis hypogaea HOM05D004075 ORTHO05D004538 2.0e-65 253.8 423 41.1
FAN01G1840 Fragaria x ananassa HOM05D004075 ORTHO05D004538 2.7e-65 253.4 433 39.7
CsaV3_7G031100 Cucumis sativus L. HOM05D004075 ORTHO05D004538 5.9e-65 252.3 400 40.5
Gohir.A08G144800 Gossypium hirsutum HOM05D004075 ORTHO05D004538 7.7e-65 251.9 395 42.3
ClCG09G004200 Citrullus lanatus HOM05D004075 ORTHO05D004538 2.3e-64 250.4 398 39.2
Lalb_Chr25g0283121 Lupinus albus HOM05D004075 ORTHO05D004538 2.3e-64 250.4 399 43.6
Gorai.004G172900 Gossypium raimondii HOM05D004075 ORTHO05D004538 5.0e-64 249.2 402 41.5
Medtr3g028600 Medicago truncatula HOM05D004075 ORTHO05D004538 1.1e-63 248.1 400 42.0
Potri.009G061900 Populus trichocarpa HOM05D004075 ORTHO05D004538 3.3e-63 246.5 396 48.5
Gohir.D08G165800 Gossypium hirsutum HOM05D004075 ORTHO05D004538 2.8e-62 243.4 402 42.3
Rhsim01G0129700 Rhododendron simsii HOM05D004075 ORTHO05D004538 8.0e-62 241.9 268 50.0
Sed0000159 Sechium edule HOM05D004075 ORTHO05D004538 1.0e-61 241.5 398 39.7
FAN06G1907 Fragaria x ananassa HOM05D004075 ORTHO05D004538 2.3e-61 240.4 417 39.8
Psat5g204000 Pisum sativum HOM05D004075 ORTHO05D004538 6.8e-61 238.8 397 42.1
Sc11g0009230 Simmondsia chinensis HOM05D004075 ORTHO05D004538 2.6e-60 236.9 344 44.8
Ca_26459_v3 Cicer arietinum L. HOM05D004075 ORTHO05D004538 8.3e-59 231.9 401 38.4
Manes.07G005500 Manihot esculenta HOM05D004075 ORTHO05D004538 1.1e-58 231.5 349 43.6
FAN10G0771 Fragaria x ananassa HOM05D004075 ORTHO05D004538 1.4e-58 231.1 421 38.5
FAN03G2231 Fragaria x ananassa HOM05D004075 ORTHO05D004538 1.6e-57 227.6 420 38.1
THA.LOC104819075 Tarenaya hassleriana HOM05D004075 ORTHO05D004538 1.6e-57 227.6 394 40.9
Sp5g10180 Schrenkiella parvula HOM05D004075 ORTHO05D004538 4.5e-57 226.1 405 45.7
AL5G32670 Arabidopsis lyrata HOM05D004075 ORTHO05D004538 2.5e-55 220.3 404 46.3
Carub.0005s1844 Capsella rubella HOM05D004075 ORTHO05D004538 1.2e-54 218.0 403 43.9
AT3G52110 Arabidopsis thaliana HOM05D004075 ORTHO05D004538 4.7e-54 216.1 403 46.2
MELO3C023547.2 Cucumis melo HOM05D004075 ORTHO05D004538 4.7e-54 216.1 391 37.6
EL10Ac2g04319 Beta vulgaris HOM05D004075 ORTHO05D004538 2.3e-53 213.8 393 41.0
TPR.G32989 Trifolium pratense HOM05D004075 ORTHO05D004538 2.3e-53 213.8 388 40.5
BcaNung06093 Brassica carinata HOM05D004075 ORTHO05D004538 8.9e-53 211.8 401 39.2
C08p27380 Brassica napus HOM05D004075 ORTHO05D004538 8.9e-53 211.8 401 39.2
CARHR161820 Cardamine hirsuta HOM05D004075 ORTHO05D004538 2.6e-52 210.3 400 44.5
Aa31LG10G7190 Aethionema arabicum HOM05D004075 ORTHO05D004538 1.3e-51 208.0 399 40.6
BraA09t39980Z Brassica rapa HOM05D004075 ORTHO05D004538 1.3e-51 208.0 401 38.7
MBI01_g18891_MAGBIO Magnolia biondii HOM05D004075 ORTHO05D004538 1.3e-51 208.0 426 37.1
A09p45170 Brassica napus HOM05D004075 ORTHO05D004538 1.7e-51 207.6 403 39.2
Haze_02822 Corylus avellana HOM05D004075 ORTHO05D004538 2.2e-51 207.2 275 45.5
BcaB01g00440 Brassica carinata HOM05D004075 ORTHO05D004538 2.9e-51 206.8 401 38.2
BolC8t50355H Brassica oleracea HOM05D004075 ORTHO05D004538 2.0e-49 200.7 401 38.4
THA.LOC104826677 Tarenaya hassleriana HOM05D004075 ORTHO05D004538 2.0e-49 200.7 385 38.2
THA.LOC104817133 Tarenaya hassleriana HOM05D004075 ORTHO05D004538 2.7e-49 200.3 337 41.5
Thhalv10010636m.g Eutrema salsugineum HOM05D004075 ORTHO05D004538 3.6e-46 189.9 282 45.4
Ah.10g038860 Amaranthus hybridus HOM05D004075 ORTHO05D004538 2.3e-45 187.2 407 36.4
BcaB02g08587 Brassica carinata HOM05D004075 ORTHO05D004538 2.0e-44 184.1 407 38.8
Aqoxy2G00118 Aquilegia oxysepala HOM05D004075 ORTHO05D004538 4.4e-44 183.0 424 32.5
unitig_578.g16697 Utricularia gibba HOM05D004075 ORTHO05D004538 1.7e-43 181.0 380 34.7
BraA04t16422Z Brassica rapa HOM05D004075 ORTHO05D004538 8.3e-43 178.7 409 36.9
CiPaw.13G003900 Carya illinoinensis HOM05D004075 ORTHO05D004538 1.9e-42 177.6 276 44.9
A04p07270 Brassica napus HOM05D004075 ORTHO05D004538 2.4e-42 177.2 409 37.2
Peaxi162Scf00337g00818 Petunia axillaris HOM05D004075 ORTHO05D004538 6.6e-40 169.1 196 51.0
BolC4t25672H Brassica oleracea HOM05D004075 ORTHO05D004538 1.9e-39 167.5 406 41.9
C04p40860 Brassica napus HOM05D004075 ORTHO05D004538 4.3e-39 166.4 406 40.9
ATR0605G345 Amborella trichopoda HOM05D004075 ORTHO05D004538 5.6e-39 166.0 234 43.6
BcaC02g09281 Brassica carinata HOM05D004075 ORTHO05D004538 5.6e-39 166.0 406 41.9
Dinv18084 Davidia involucrata HOM05D004075 ORTHO05D004538 7.3e-39 165.6 240 40.8
Potri.006G054900 Populus trichocarpa HOM05D004075 ORTHO05D004538 1.8e-37 161.0 250 37.6
ECA248G1140 Erigeron canadensis HOM05D004075 ORTHO05D004538 4.0e-37 159.8 268 40.3
Prupe.7G067300 Prunus persica HOM05D004075 ORTHO05D004538 5.2e-37 159.5 238 42.0
Cfa016858 Carpinus fangiana HOM05D004075 ORTHO05D004538 3.4e-36 156.8 241 39.4
CiPaw.10G031200 Carya illinoinensis HOM05D004075 ORTHO05D004538 3.4e-36 156.8 244 39.3
Thecc.05G162200 Theobroma cacao HOM05D004075 ORTHO05D004538 4.4e-36 156.4 242 40.5
Zm00001eb402070 Zea mays HOM05D004075 ORTHO05D004538 5.8e-36 156.0 423 32.9
AUR62023061 Chenopodium quinoa HOM05D004075 ORTHO05D004538 9.9e-36 155.2 348 37.9
Duzib106G1725 Durio zibethinus HOM05D004075 ORTHO05D004538 4.9e-35 152.9 232 40.5
QL07p021680 Quercus lobata HOM05D004075 ORTHO05D004538 4.9e-35 152.9 240 39.2
HPP92_020393 Vanilla planifolia HOM05D004075 ORTHO05D004538 1.4e-34 151.4 404 36.1
MD12G1066800 Malus domestica HOM05D004075 ORTHO05D004538 1.9e-34 151.0 231 39.0
COL.COLO4_28674 Corchorus olitorius HOM05D004075 ORTHO05D004538 3.2e-34 150.2 242 39.7
FAN09G1122 Fragaria x ananassa HOM05D004075 ORTHO05D004538 3.2e-34 150.2 240 39.2
Glyma.03G139500 Glycine max HOM05D004075 ORTHO05D004538 3.5e-33 146.7 240 38.3
Duzib093G1674 Durio zibethinus HOM05D004075 ORTHO05D004538 1.0e-32 145.2 231 40.7
Lsat_1_v5_gn_1_107340 Lactuca sativa HOM05D004075 ORTHO05D004538 1.7e-32 144.4 239 38.5
FAN02G0713 Fragaria x ananassa HOM05D004075 ORTHO05D004538 3.0e-32 143.7 255 37.6
Manes.08G048400 Manihot esculenta HOM05D004075 ORTHO05D004538 3.0e-32 143.7 236 41.1
Lalb_Chr25g0287431 Lupinus albus HOM05D004075 ORTHO05D004538 3.9e-32 143.3 256 39.1
Os03g0174200 Oryza sativa ssp. japonica HOM05D004075 ORTHO05D004538 3.9e-32 143.3 419 31.5
CANSAT80G1662 Cannabis sativa HOM05D004075 ORTHO05D004538 6.6e-32 142.5 227 41.4
RcHm_v2.0_Chr3g0481111 Rosa chinensis HOM05D004075 ORTHO05D004538 4.3e-31 139.8 213 39.0
Haze_19908 Corylus avellana HOM05D004075 ORTHO05D004538 7.3e-31 139.0 228 36.4
Phvul.001G136500 Phaseolus vulgaris HOM05D004075 ORTHO05D004538 1.6e-30 137.9 239 37.2
Ca_08481_v3 Cicer arietinum L. HOM05D004075 ORTHO05D004538 2.8e-30 137.1 250 38.4
Lj1g0004317 Lotus japonicus HOM05D004075 ORTHO05D004538 3.6e-30 136.7 257 36.6
Psat0s1894g0080 Pisum sativum HOM05D004075 ORTHO05D004538 8.1e-30 135.6 239 37.2
Zm00001eb005640 Zea mays HOM05D004075 ORTHO05D004538 8.1e-30 135.6 337 33.5
Atru.chr2.310 Acer truncatum HOM05D004075 ORTHO05D004538 3.1e-29 133.7 274 39.8
VMungo1383G2046 Vigna mungo HOM05D004075 ORTHO05D004538 8.9e-29 132.1 210 38.6
Atru.chr1.1036 Acer truncatum HOM05D004075 ORTHO05D004538 1.2e-28 131.7 235 38.7
TPR.G3891 Trifolium pratense HOM05D004075 ORTHO05D004538 3.4e-28 130.2 251 36.7
Medtr7g092270 Medicago truncatula HOM05D004075 ORTHO05D004538 9.9e-28 128.6 250 36.8
CDE10G0025 Ceratophyllum demersum HOM05D004075 ORTHO05D004538 2.4e-26 124.0 391 28.6
Migut.N01589 Erythranthe guttata HOM05D004075 ORTHO05D004538 6.0e-25 119.4 172 51.2
Rhsim07G0166600 Rhododendron simsii HOM05D004075 ORTHO05D004538 3.3e-23 113.6 202 40.1
AUR62009380 Chenopodium quinoa HOM05D004075 ORTHO05D004538 6.2e-22 109.4 165 45.5
Sabra16G0056300 Salix brachista HOM05D004075 ORTHO05D004538 3.1e-21 107.1 92 48.9
AUR62044097 Chenopodium quinoa HOM05D004075 ORTHO05D004538 2.2e-19 100.9 240 36.2
SEGI_33290 Sequoiadendron giganteum HOM05D004075 ORTHO05D004538 3.2e-18 97.1 147 34.7
SEGI_02901 Sequoiadendron giganteum HOM05D004075 ORTHO05D004538 6.0e-17 92.8 145 35.9
SEGI_25355 Sequoiadendron giganteum HOM05D000006 ORTHO05D004538 6.0e-17 92.8 145 35.9
Rhsim01G0129600 Rhododendron simsii HOM05D004075 ORTHO05D004538 3.0e-16 90.5 141 42.6
SEGI_00378 Sequoiadendron giganteum HOM05D004075 ORTHO05D004538 6.6e-16 89.4 146 33.6
SEGI_06755 Sequoiadendron giganteum HOM05D004075 ORTHO05D004538 1.2e-12 78.6 130 36.2
Dinv00534 Davidia involucrata HOM05D004075 ORTHO05D004538 2.2e-11 74.3 47 63.8
BcaB01g00444 Brassica carinata HOM05D004075 ORTHO05D004538 8.4e-11 72.4 179 45.3
CARHR117420 Cardamine hirsuta HOM05D001890 ORTHO05D004538 6.0e-09 66.2 115 47.0
VMungo1383G1333 Vigna mungo HOM05D004075 ORTHO05D004538 6.0e-09 66.2 51 54.9


User provided reference genes

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