Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047569.1 Olea europaea HOM05D005495 ORTHO05D006878 5.2e-23 110.2 54 100.0
GSVIVG01017720001 Vitis vinifera HOM05D005495 ORTHO05D006878 1.6e-16 88.6 60 76.7
CAN.G484.95 Capsicum annuum HOM05D005495 ORTHO05D006878 2.1e-16 88.2 60 76.7
Oeu063165.1 Olea europaea HOM05D005495 ORTHO05D006878 2.1e-16 88.2 60 76.7
Oeu063167.2 Olea europaea HOM05D005495 ORTHO05D006878 2.1e-16 88.2 60 76.7
Solyc12g098890.2 Solanum lycopersicum HOM05D005495 ORTHO05D006878 3.6e-16 87.4 60 75.0
Sopen12g033640 Solanum pennellii HOM05D005495 ORTHO05D006878 3.6e-16 87.4 60 75.0
PGSC0003DMG400004682 Solanum tuberosum HOM05D005495 ORTHO05D006878 3.6e-16 87.4 60 75.0
Nitab4.5_0000978g0010 Nicotiana tabacum HOM05D005495 ORTHO05D006878 8.0e-16 86.3 60 75.0
Nitab4.5_0003998g0040 Nicotiana tabacum HOM05D005495 ORTHO05D006878 8.0e-16 86.3 60 75.0
Potri.010G005000 Populus trichocarpa HOM05D005495 ORTHO05D006878 8.0e-16 86.3 60 75.0
Sabra10G0004200 Salix brachista HOM05D005495 ORTHO05D006878 8.0e-16 86.3 60 75.0
Dinv26490 Davidia involucrata HOM05D005495 ORTHO05D006878 1.0e-15 85.9 60 71.7
Peaxi162Scf00323g00929 Petunia axillaris HOM05D005495 ORTHO05D006878 1.0e-15 85.9 60 75.0
CiPaw.02G068300 Carya illinoinensis HOM05D005495 ORTHO05D006878 1.4e-15 85.5 60 73.3
Hund12271 Selenicereus undatus HOM05D005495 ORTHO05D006878 1.4e-15 85.5 60 73.3
Hund12272 Selenicereus undatus HOM05D005495 ORTHO05D006878 1.4e-15 85.5 60 73.3
CSS0010244 Camellia sinensis var. sinensis HOM05D005495 ORTHO05D006878 2.3e-15 84.7 60 71.7
Eucgr.B02183 Eucalyptus grandis HOM05D005495 ORTHO05D006878 3.0e-15 84.3 60 70.0
EL10Ac3g06214 Beta vulgaris HOM05D005495 ORTHO05D006878 4.0e-15 84.0 60 71.7
AUR62023677 Chenopodium quinoa HOM05D005495 ORTHO05D006878 4.0e-15 84.0 60 71.7
Cfa015763 Carpinus fangiana HOM05D005495 ORTHO05D006878 6.8e-15 83.2 60 71.7
Eucgr.L01079 Eucalyptus grandis HOM05D005495 ORTHO05D006878 8.9e-15 82.8 60 70.0
FAN07G0874 Fragaria x ananassa HOM05D005495 ORTHO05D006878 8.9e-15 82.8 60 71.7
PGR004G2778 Punica granatum HOM05D005495 ORTHO05D006878 8.9e-15 82.8 60 70.0
QL06p014840 Quercus lobata HOM05D005495 ORTHO05D006878 8.9e-15 82.8 60 71.7
RcHm_v2.0_Chr4g0428131 Rosa chinensis HOM05D005495 ORTHO05D006878 8.9e-15 82.8 60 71.7
Ah.13g073090 Amaranthus hybridus HOM05D005495 ORTHO05D006878 1.2e-14 82.4 60 70.0
Manes.01G048400 Manihot esculenta HOM05D005495 ORTHO05D006878 1.2e-14 82.4 60 71.7
Rhsim09G0032900 Rhododendron simsii HOM05D005495 ORTHO05D006878 1.2e-14 82.4 58 74.1
Atru.chr4.3197 Acer truncatum HOM05D005495 ORTHO05D006878 2.0e-14 81.6 60 68.3
Actinidia35901 Actinidia chinensis HOM05D005495 ORTHO05D006878 2.0e-14 81.6 60 71.7
MD16G1131500 Malus domestica HOM05D005495 ORTHO05D006878 2.0e-14 81.6 60 71.7
PSO357G0664 Papaver somniferum HOM05D005495 ORTHO05D006878 2.0e-14 81.6 60 71.7
Gohir.A08G081800 Gossypium hirsutum HOM05D005495 ORTHO05D006878 2.6e-14 81.3 60 70.0
Gorai.004G096600 Gossypium raimondii HOM05D005495 ORTHO05D006878 2.6e-14 81.3 60 70.0
SGA_v2.0_scaffold5G02973 Striga asiatica HOM05D005495 ORTHO05D006878 2.6e-14 81.3 60 70.0
vmacro00585 Vaccinium macrocarpon HOM05D005495 ORTHO05D006878 2.6e-14 81.3 58 72.4
Gohir.D08G091100 Gossypium hirsutum HOM05D005495 ORTHO05D006878 3.4e-14 80.9 60 70.0
FvH4_4g21870 Fragaria vesca HOM05D005495 ORTHO05D006878 4.4e-14 80.5 60 70.0
FAN12G1024 Fragaria x ananassa HOM05D005495 ORTHO05D006878 4.4e-14 80.5 60 70.0
FAN17G0375 Fragaria x ananassa HOM05D005495 ORTHO05D006878 4.4e-14 80.5 60 70.0
Sc25g0002370 Simmondsia chinensis HOM05D005495 ORTHO05D006878 4.4e-14 80.5 60 66.7
Thecc.09G200200 Theobroma cacao HOM05D005495 ORTHO05D006878 4.4e-14 80.5 60 70.0
TAR362G1223 Trochodendron aralioides HOM05D005495 ORTHO05D006878 4.4e-14 80.5 60 66.7
Actinidia33011 Actinidia chinensis HOM05D005495 ORTHO05D006878 5.7e-14 80.1 60 70.0
Ciclev10022561m.g Citrus clementina HOM05D005495 ORTHO05D006878 5.7e-14 80.1 55 72.7
COL.COLO4_35587 Corchorus olitorius HOM05D005495 ORTHO05D006878 5.7e-14 80.1 60 68.3
MD13G1136100 Malus domestica HOM05D005495 ORTHO05D006878 5.7e-14 80.1 60 68.3
MSTRG.28074 Avicennia marina HOM05D005495 ORTHO05D006878 7.5e-14 79.7 60 70.0
Cc04_g13640 Coffea canephora HOM05D005495 ORTHO05D006878 7.5e-14 79.7 60 71.7
PSO170G2754 Papaver somniferum HOM05D005495 ORTHO05D006878 7.5e-14 79.7 60 70.0
Lsat_1_v5_gn_5_109481 Lactuca sativa HOM05D005495 ORTHO05D006878 9.8e-14 79.3 60 66.7
MBI18_g28932_MAGBIO Magnolia biondii HOM05D005495 ORTHO05D006878 9.8e-14 79.3 60 66.7
VMungo1309G3094 Vigna mungo HOM05D005495 ORTHO05D006878 9.8e-14 79.3 60 68.3
Nn1g08285 Nelumbo nucifera HOM05D005495 ORTHO05D006878 1.3e-13 79.0 60 70.0
Nn5g29782 Nelumbo nucifera HOM05D005495 ORTHO05D006878 1.3e-13 79.0 60 70.0
Prupe.1G209300 Prunus persica HOM05D005495 ORTHO05D006878 1.7e-13 78.6 60 68.3
ATR0561G067 Amborella trichopoda HOM05D005495 ORTHO05D006878 2.2e-13 78.2 60 66.7
CsaV3_3G015690 Cucumis sativus L. HOM05D005495 ORTHO05D006878 2.2e-13 78.2 60 70.0
Glyma.09G077600 Glycine max HOM05D005495 ORTHO05D006878 2.2e-13 78.2 60 70.0
Sed0015702 Sechium edule HOM05D005495 ORTHO05D006878 2.8e-13 77.8 60 70.0
CARHR037960 Cardamine hirsuta HOM05D005495 ORTHO05D006878 3.7e-13 77.4 59 69.5
Ca_02315_v3 Cicer arietinum L. HOM05D005495 ORTHO05D006878 3.7e-13 77.4 60 70.0
Duzib251G0959 Durio zibethinus HOM05D005495 ORTHO05D006878 3.7e-13 77.4 60 66.7
ECA234G1716 Erigeron canadensis HOM05D005495 ORTHO05D006878 3.7e-13 77.4 60 65.0
HanXRQChr10g0290461 Helianthus annuus HOM05D005495 ORTHO05D006878 3.7e-13 77.4 60 63.3
Nn2g14382 Nelumbo nucifera HOM05D005495 ORTHO05D006878 4.9e-13 77.0 60 68.3
Aqoxy5G02875 Aquilegia oxysepala HOM05D005495 ORTHO05D006878 6.3e-13 76.6 59 67.8
HanXRQChr16g0513961 Helianthus annuus HOM05D005495 ORTHO05D006878 6.3e-13 76.6 60 63.3
Sed0019465 Sechium edule HOM05D005495 ORTHO05D006878 6.3e-13 76.6 60 68.3
ClCG05G007000 Citrullus lanatus HOM05D005495 ORTHO05D006878 8.3e-13 76.3 60 68.3
MELO3C006766.2 Cucumis melo HOM05D005495 ORTHO05D006878 8.3e-13 76.3 60 68.3
Psat1g016560 Pisum sativum HOM05D005495 ORTHO05D006878 8.3e-13 76.3 60 68.3
AL1G54950 Arabidopsis lyrata HOM05D005495 ORTHO05D006878 1.1e-12 75.9 59 67.8
AT1G48350 Arabidopsis thaliana HOM05D005495 ORTHO05D006878 1.1e-12 75.9 59 67.8
BcaC07g37142 Brassica carinata HOM05D005495 ORTHO05D006878 1.1e-12 75.9 59 67.8
A08p04780 Brassica napus HOM05D005495 ORTHO05D006878 1.1e-12 75.9 59 67.8
C08p05150 Brassica napus HOM05D005495 ORTHO05D006878 1.1e-12 75.9 59 67.8
BolC8t47325H Brassica oleracea HOM05D005495 ORTHO05D006878 1.1e-12 75.9 59 67.8
BraA08t32508Z Brassica rapa HOM05D005495 ORTHO05D006878 1.1e-12 75.9 59 67.8
Carub.0001s3747 Capsella rubella HOM05D005495 ORTHO05D006878 1.1e-12 75.9 59 67.8
Duzib177G0638 Durio zibethinus HOM05D005495 ORTHO05D006878 1.1e-12 75.9 60 68.3
Phvul.009G221700 Phaseolus vulgaris HOM05D005495 ORTHO05D006878 1.1e-12 75.9 60 68.3
Sp1g35300 Schrenkiella parvula HOM05D005495 ORTHO05D006878 1.1e-12 75.9 59 67.8
CANSAT01G2767 Cannabis sativa HOM05D005495 ORTHO05D006878 1.4e-12 75.5 58 67.2
Lj6g0020934 Lotus japonicus HOM05D005495 ORTHO05D006878 1.4e-12 75.5 60 66.7
BcaB04g17437 Brassica carinata HOM05D005495 ORTHO05D006878 1.8e-12 75.1 59 66.1
Lalb_Chr08g0232951 Lupinus albus HOM05D005495 ORTHO05D006878 2.4e-12 74.7 60 66.7
Lalb_Chr11g0073801 Lupinus albus HOM05D005495 ORTHO05D006878 2.4e-12 74.7 60 66.7
THA.LOC104821817 Tarenaya hassleriana HOM05D005495 ORTHO05D006878 2.4e-12 74.7 57 66.7
TPR.G18013 Trifolium pratense HOM05D005495 ORTHO05D006878 2.4e-12 74.7 54 70.4
Glyma.15G185000 Glycine max HOM05D005495 ORTHO05D006878 3.2e-12 74.3 60 68.3
Lj3A842T60 Lonicera japonica HOM05D005495 ORTHO05D006878 3.2e-12 74.3 76 53.9
Thhalv10011822m.g Eutrema salsugineum HOM05D005495 ORTHO05D006878 4.1e-12 73.9 59 64.4
arahy.Tifrunner.gnm1.ann1.47CT68 Arachis hypogaea HOM05D005495 ORTHO05D006878 5.4e-12 73.6 60 66.7
arahy.Tifrunner.gnm1.ann1.7J6TQU Arachis hypogaea HOM05D005495 ORTHO05D006878 5.4e-12 73.6 60 66.7
arahy.Tifrunner.gnm1.ann1.C7LR0V Arachis hypogaea HOM05D005495 ORTHO05D006878 5.4e-12 73.6 60 66.7
Aa31LG10G5410 Aethionema arabicum HOM05D005495 ORTHO05D006878 9.2e-12 72.8 59 64.4
DCAR_026923 Daucus carota HOM05D005495 ORTHO05D006878 9.2e-12 72.8 60 63.3
Medtr2g044920 Medicago truncatula HOM05D005495 ORTHO05D006878 9.2e-12 72.8 54 70.4
CDE11G0957 Ceratophyllum demersum HOM05D005495 ORTHO05D006878 1.6e-11 72.0 60 61.7
CDE02G3134 Ceratophyllum demersum HOM05D005495 ORTHO05D006878 2.0e-11 71.6 60 63.3
arahy.Tifrunner.gnm1.ann1.9LP875 Arachis hypogaea HOM05D005495 ORTHO05D006878 2.7e-11 71.2 60 65.0
Nn6g34060 Nelumbo nucifera HOM05D005495 ORTHO05D006878 3.5e-11 70.9 52 71.2
HPP92_026860 Vanilla planifolia HOM05D005495 ORTHO05D006878 1.7e-10 68.6 60 58.3
CSS0024695 Camellia sinensis var. sinensis HOM05D005495 ORTHO05D006878 3.9e-10 67.4 35 85.7
Haze_00740 Corylus avellana HOM05D005495 ORTHO05D006878 3.9e-10 67.4 35 85.7
SEGI_13687 Sequoiadendron giganteum HOM05D005495 ORTHO05D006878 3.9e-10 67.4 57 64.9
SEGI_23609 Sequoiadendron giganteum HOM05D005495 ORTHO05D006878 5.0e-10 67.0 55 65.5
CSS0009878 Camellia sinensis var. sinensis HOM05D005495 ORTHO05D006878 1.1e-09 65.9 109 39.4
arahy.Tifrunner.gnm1.ann1.U7ILUP Arachis hypogaea HOM05D005495 ORTHO05D006878 2.5e-09 64.7 80 48.8
Actinidia04610 Actinidia chinensis HOM05D005495 ORTHO05D006878 7.3e-09 63.2 36 80.6
Mapoly0060s0071 Marchantia polymorpha HOM05D005495 ORTHO05D006878 1.6e-08 62.0 60 56.7
A02p02410 Brassica napus HOM05D005495 ORTHO05D041539 2.1e-08 61.6 34 79.4
C05p41600 Brassica napus HOM05D001349 ORTHO05D027195 2.1e-08 61.6 34 79.4
BraA09t40268Z Brassica rapa HOM05D005495 ORTHO05D041539 2.1e-08 61.6 34 79.4
C09p43950 Brassica napus HOM05D005495 ORTHO05D006878 2.8e-08 61.2 34 79.4
Zm00001eb063340 Zea mays HOM05D005495 ORTHO05D006878 4.7e-08 60.5 59 55.9
TAR633G1063 Trochodendron aralioides HOM05D005495 ORTHO05D006878 6.1e-08 60.1 46 67.4
unitig_22.g5836 Utricularia gibba HOM05D005495 ORTHO05D006878 1.8e-07 58.5 35 77.1
Pp3c11_5070 Physcomitrium patens HOM05D005495 ORTHO05D006878 4.0e-07 57.4 57 52.6
Pp3c7_24650 Physcomitrium patens HOM05D005495 ORTHO05D006878 6.8e-07 56.6 56 53.6
Nn3g20978 Nelumbo nucifera HOM05D005495 ORTHO05D006878 1.5e-06 55.5 31 80.6
SMO347G0648 Selaginella moellendorffii HOM05D005495 ORTHO05D006878 3.4e-06 54.3 35 68.6
Pp3c1_8470 Physcomitrium patens HOM05D005495 ORTHO05D006878 5.8e-06 53.5 57 50.9
AagrBONN_evm.TU.Sc2ySwM_368.2340 Anthoceros agrestis HOM05D005495 ORTHO05D006878 7.5e-06 53.1 59 50.8
Cre01.g052100 Chlamydomonas reinhardtii HOM05D005495 ORTHO05D006878 7.5e-06 53.1 57 49.1


User provided reference genes

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