Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 2.3e-57 225.7 145 100.0
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 1.4e-30 136.7 112 62.5
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 1.6e-26 123.2 114 56.1
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 2.7e-26 122.5 118 55.9
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 3.5e-26 122.1 120 57.5
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 2.3e-25 119.4 118 57.6
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 3.9e-25 118.6 117 54.7
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 3.9e-25 118.6 117 53.8
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 5.1e-25 118.2 119 52.9
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 6.7e-25 117.9 117 53.8
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 8.7e-25 117.5 104 58.7
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 8.7e-25 117.5 108 54.6
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 2.5e-24 115.9 116 52.6
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.5e-21 106.7 120 52.5
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 3.4e-21 105.5 107 50.5
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.0e-20 104.0 116 51.7
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 2.2e-20 102.8 119 50.4
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 1.1e-19 100.5 119 49.6
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 3.2e-19 99.0 119 48.7
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 3.2e-19 99.0 119 45.4
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 3.2e-19 99.0 119 45.4
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 7.1e-19 97.8 120 42.5
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 9.3e-19 97.4 119 47.9
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 9.3e-19 97.4 107 47.7
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.2e-18 97.1 107 46.7
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.2e-18 97.1 122 44.3
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.6e-18 96.7 119 49.6
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 2.1e-18 96.3 121 48.8
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 2.1e-18 96.3 122 44.3
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 3.5e-18 95.5 107 49.5
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 3.5e-18 95.5 122 44.3
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 6.0e-18 94.7 115 44.3
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 1.0e-17 94.0 121 47.9
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 1.0e-17 94.0 120 48.3
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 1.3e-17 93.6 118 45.8
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 1.8e-17 93.2 112 46.4
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 3.0e-17 92.4 98 45.9
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 3.9e-17 92.0 119 43.7
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 5.1e-17 91.7 90 52.2
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 6.7e-17 91.3 120 43.3
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 6.7e-17 91.3 119 45.4
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 8.7e-17 90.9 93 52.7
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.1e-16 90.5 118 41.5
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 1.1e-16 90.5 111 39.6
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 1.5e-16 90.1 119 43.7
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 1.9e-16 89.7 119 42.9
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 1.9e-16 89.7 119 42.0
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 2.5e-16 89.4 101 40.6
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 2.5e-16 89.4 112 45.5
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 2.5e-16 89.4 109 44.0
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 2.5e-16 89.4 116 46.6
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 3.3e-16 89.0 112 45.5
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 3.3e-16 89.0 119 42.9
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 4.3e-16 88.6 112 50.0
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.3e-16 88.6 112 50.0
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.3e-16 88.6 112 50.0
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 4.3e-16 88.6 118 44.9
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 5.7e-16 88.2 87 56.3
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 5.7e-16 88.2 87 50.6
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.6e-15 86.7 112 49.1
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 1.6e-15 86.7 115 42.6
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 1.6e-15 86.7 113 47.8
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 2.8e-15 85.9 117 41.9
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 3.7e-15 85.5 114 41.2
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 3.7e-15 85.5 97 48.5
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 6.3e-15 84.7 88 51.1
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 1.1e-14 84.0 119 43.7
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 1.4e-14 83.6 115 44.3
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 1.4e-14 83.6 117 41.0
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 1.8e-14 83.2 108 43.5
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.8e-14 83.2 112 41.1
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 2.4e-14 82.8 104 44.2
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 3.1e-14 82.4 120 41.7
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 5.3e-14 81.6 100 38.0
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 1.5e-13 80.1 101 37.6
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 1.5e-13 80.1 121 35.5
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.6e-13 79.3 126 38.9
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.6e-13 79.3 126 38.9
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 2.6e-13 79.3 100 47.0
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 4.5e-13 78.6 101 37.6
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.3e-12 77.0 102 34.3
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 1.3e-12 77.0 102 38.2
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 1.7e-12 76.6 102 33.3
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 1.7e-12 76.6 102 33.3
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 2.2e-12 76.3 102 33.3
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 2.2e-12 76.3 102 33.3
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.9e-12 75.9 101 38.6
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 5.0e-12 75.1 120 32.5
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 1.1e-11 73.9 77 51.9
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 1.4e-11 73.6 102 37.3
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 2.5e-11 72.8 84 45.2
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 4.2e-11 72.0 90 34.4
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 5.5e-11 71.6 102 36.3
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 7.2e-11 71.2 104 37.5
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 9.4e-11 70.9 104 37.5
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 1.6e-10 70.1 104 36.5
SalBow1G0981 Salvia bowleyana HOM05D007364 ORTHO05D009275 1.6e-10 70.1 88 43.2
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 2.1e-10 69.7 104 36.5
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 7.9e-10 67.8 113 35.4
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 1.4e-09 67.0 70 51.4
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 1.8e-09 66.6 111 41.4
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 2.3e-09 66.2 113 34.5
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 3.0e-09 65.9 103 37.9
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 5.1e-09 65.1 119 36.1


User provided reference genes

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