Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 1.5e-65 252.7 126 100.0
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 6.0e-30 134.4 124 58.1
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 3.3e-28 128.6 123 52.8
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 1.6e-27 126.3 123 52.8
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 4.7e-27 124.8 96 64.6
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 4.7e-27 124.8 124 52.4
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 5.2e-26 121.3 119 47.1
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 1.2e-25 120.2 111 60.4
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 2.6e-25 119.0 108 52.8
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.6e-25 119.0 97 56.7
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 3.4e-25 118.6 110 54.5
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 9.9e-25 117.1 128 48.4
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.7e-24 116.3 111 55.0
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 2.2e-24 115.9 126 48.4
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 3.8e-24 115.2 96 54.2
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 8.4e-24 114.0 124 50.0
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.1e-23 113.6 127 46.5
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.1e-23 113.6 97 57.7
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.4e-23 112.5 97 56.7
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 5.4e-23 111.3 124 48.4
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 2.1e-22 109.4 98 50.0
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 2.7e-22 109.0 130 44.6
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 4.6e-22 108.2 118 45.8
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 1.3e-21 106.7 123 47.2
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 1.7e-21 106.3 128 49.2
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 8.7e-21 104.0 116 53.4
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 8.7e-21 104.0 116 53.4
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.9e-20 102.8 124 45.2
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 1.9e-20 102.8 114 47.4
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 1.9e-20 102.8 126 45.2
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 2.5e-20 102.4 113 46.0
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 4.3e-20 101.7 124 43.5
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 9.6e-20 100.5 131 42.7
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 1.3e-19 100.1 118 50.0
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.3e-19 100.1 126 46.0
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 1.3e-19 100.1 101 44.6
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 1.6e-19 99.8 105 47.6
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 2.8e-19 99.0 87 51.7
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 3.6e-19 98.6 126 46.0
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 3.6e-19 98.6 126 46.0
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 3.6e-19 98.6 100 52.0
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 4.8e-19 98.2 111 45.0
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 4.8e-19 98.2 123 42.3
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 4.8e-19 98.2 126 43.7
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 4.8e-19 98.2 126 43.7
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 6.2e-19 97.8 119 48.7
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.4e-18 95.9 126 42.9
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 3.1e-18 95.5 127 45.7
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 5.3e-18 94.7 104 50.0
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 5.3e-18 94.7 109 43.1
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 6.9e-18 94.4 128 43.8
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.5e-17 93.2 125 47.2
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.0e-17 92.8 108 38.9
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 3.4e-17 92.0 127 45.7
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 3.4e-17 92.0 96 45.8
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 3.4e-17 92.0 114 41.2
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 7.6e-17 90.9 119 44.5
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.3e-16 90.1 118 46.6
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 3.8e-16 88.6 97 45.4
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 4.9e-16 88.2 99 42.4
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 4.9e-16 88.2 99 42.4
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 8.4e-16 87.4 110 40.9
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 8.4e-16 87.4 127 37.8
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 1.1e-15 87.0 126 39.7
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 1.1e-15 87.0 96 45.8
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.4e-15 86.7 124 38.7
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.9e-15 86.3 119 45.4
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.9e-15 86.3 102 48.0
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 9.3e-15 84.0 124 37.1
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 9.3e-15 84.0 127 37.8
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.6e-14 83.2 109 38.5
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 2.1e-14 82.8 126 38.1
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 6.0e-14 81.3 126 36.5
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.0e-13 80.5 110 39.1
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 1.7e-13 79.7 103 42.7
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.3e-13 79.3 79 49.4
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 3.9e-13 78.6 124 37.1
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 3.9e-13 78.6 71 53.5
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 8.7e-13 77.4 109 38.5
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 1.1e-12 77.0 92 44.6
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 1.1e-12 77.0 92 44.6
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.5e-12 76.6 123 33.3
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 1.5e-12 76.6 103 48.5
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 3.3e-12 75.5 95 50.5
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 2.1e-11 72.8 124 39.5
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 2.8e-11 72.4 125 32.0
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 4.8e-11 71.6 80 43.8
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 1.1e-10 70.5 102 37.3
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 3.1e-10 68.9 85 47.1
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 5.3e-10 68.2 77 48.1
arahy.Tifrunner.gnm1.ann1.4UH4YI Arachis hypogaea HOM05D026189 ORTHO05D009508 9.0e-10 67.4 111 36.9
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 1.5e-09 66.6 97 33.0
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 2.0e-09 66.2 51 52.9
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 3.4e-09 65.5 101 35.6
arahy.Tifrunner.gnm1.ann1.NE5PRN Arachis hypogaea HOM05D026189 ORTHO05D009508 3.4e-09 65.5 111 35.1
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 4.5e-09 65.1 60 46.7
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 9.9e-09 63.9 60 48.3
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 7.1e-07 57.8 92 34.8
arahy.Tifrunner.gnm1.ann1.K3RR71 Arachis hypogaea HOM05D026189 ORTHO05D009508 2.7e-06 55.8 99 37.4


User provided reference genes

Program Settings