Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047292.1 Olea europaea HOM05D007106 ORTHO05D007770 7.6e-141 503.8 256 100.0
Oeu002422.1 Olea europaea HOM05D005444 ORTHO05D006773 7.9e-21 105.1 107 58.9
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 6.3e-18 95.5 96 53.1
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 6.3e-18 95.5 96 53.1
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 6.3e-18 95.5 98 56.1
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.5e-16 90.9 90 53.3
SalBow7G1857 Salvia bowleyana HOM05D007106 ORTHO05D007770 2.6e-16 90.1 97 54.6
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 7.7e-16 88.6 97 54.6
Oeu047291.1 Olea europaea HOM05D065169 ORTHO05D288713 1.3e-15 87.8 104 51.9
Peaxi162Scf00274g00521 Petunia axillaris HOM05D007106 ORTHO05D007770 1.3e-15 87.8 99 48.5
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 1.7e-15 87.4 97 50.5
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 2.9e-15 86.7 100 52.0
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 3.8e-15 86.3 90 51.1
Nitab4.5_0001128g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 5.0e-15 85.9 100 50.0
Cc04_g16540 Coffea canephora HOM05D007106 ORTHO05D007770 2.5e-14 83.6 84 58.3
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 9.4e-14 81.6 90 53.3
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 9.4e-14 81.6 90 53.3
RcHm_v2.0_Chr7g0181551 Rosa chinensis HOM05D007106 ORTHO05D007770 9.4e-14 81.6 97 47.4
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 2.1e-13 80.5 101 52.5
Eucgr.K02478 Eucalyptus grandis HOM05D007106 ORTHO05D007770 6.1e-13 79.0 95 48.4
Cfa018934 Carpinus fangiana HOM05D007106 ORTHO05D007770 7.9e-13 78.6 98 49.0
Peaxi162Scf01256g00221 Petunia axillaris HOM05D007106 ORTHO05D007770 1.0e-12 78.2 84 54.8
FvH4_5g14840 Fragaria vesca HOM05D007106 ORTHO05D007770 1.4e-12 77.8 100 51.0
FAN18G2192 Fragaria x ananassa HOM05D007106 ORTHO05D007770 1.4e-12 77.8 100 51.0
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 1.8e-12 77.4 96 49.0
Cpa.g.sc423.1 Carica papaya HOM05D007106 ORTHO05D007770 3.9e-12 76.3 91 48.4
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 5.1e-12 75.9 91 48.4
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 6.7e-12 75.5 96 49.0
PGSC0003DMG400019509 Solanum tuberosum HOM05D007106 ORTHO05D007770 6.7e-12 75.5 101 46.5
CANSAT80G2807 Cannabis sativa HOM05D007106 ORTHO05D007770 3.3e-11 73.2 100 43.0
Solyc03g115950.3 Solanum lycopersicum HOM05D007106 ORTHO05D007770 3.3e-11 73.2 100 49.0
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 7.4e-11 72.0 90 47.8
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 9.7e-11 71.6 87 48.3
Actinidia04893 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.3e-10 71.2 87 44.8
Ciclev10022899m.g Citrus clementina HOM05D007106 ORTHO05D007770 1.3e-10 71.2 94 46.8
Nitab4.5_0000121g0170 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.7e-10 70.9 86 51.2
TWI15G1028 Tripterygium wilfordii HOM05D007106 ORTHO05D007770 1.7e-10 70.9 100 45.0
Atru.chr9.252 Acer truncatum HOM05D007106 ORTHO05D007770 2.8e-10 70.1 97 47.4
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 3.7e-10 69.7 98 45.9
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 3.7e-10 69.7 95 45.3
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 3.7e-10 69.7 81 50.6
PGR083G1166 Punica granatum HOM05D007106 ORTHO05D007770 4.8e-10 69.3 91 46.2
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 4.8e-10 69.3 90 45.6
Nitab4.5_0008269g0020 Nicotiana tabacum HOM05D007106 ORTHO05D007770 6.3e-10 68.9 84 48.8
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 6.3e-10 68.9 88 51.1
Rhsim12G0155900 Rhododendron simsii HOM05D007106 ORTHO05D007770 8.2e-10 68.6 94 44.7
Sed0002642 Sechium edule HOM05D007106 ORTHO05D007770 2.4e-09 67.0 91 45.1
Gorai.003G097700 Gossypium raimondii HOM05D007106 ORTHO05D007770 3.1e-09 66.6 86 47.7
Gohir.A03G067200 Gossypium hirsutum HOM05D007106 ORTHO05D007770 4.1e-09 66.2 86 47.7
Psat4g050160 Pisum sativum HOM05D007106 ORTHO05D007770 4.1e-09 66.2 90 46.7
Eucgr.B00514 Eucalyptus grandis HOM05D007106 ORTHO05D007770 5.3e-09 65.9 95 45.3
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 5.3e-09 65.9 86 46.5
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 6.9e-09 65.5 90 45.6
Gohir.D03G093700 Gossypium hirsutum HOM05D007106 ORTHO05D007770 9.1e-09 65.1 86 46.5
Hund02644 Selenicereus undatus HOM05D007106 ORTHO05D007770 1.5e-08 64.3 98 39.8
Sopen12g025630 Solanum pennellii HOM05D007106 ORTHO05D007770 2.0e-08 63.9 77 46.8
Sed0016719 Sechium edule HOM05D007106 ORTHO05D007770 2.6e-08 63.5 91 41.8
PGSC0003DMG400019989 Solanum tuberosum HOM05D007106 ORTHO05D007770 3.4e-08 63.2 77 49.4
THA.LOC104812541 Tarenaya hassleriana HOM05D007106 ORTHO05D007770 4.5e-08 62.8 100 39.0
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 5.9e-08 62.4 92 45.7
Solyc07g150120.1 Solanum lycopersicum HOM05D007106 ORTHO05D007770 7.7e-08 62.0 77 44.2
vmacro16544 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 1.0e-07 61.6 92 43.5
CSS0008414 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.3e-07 61.2 82 46.3
MELO3C001986.2 Cucumis melo HOM05D007106 ORTHO05D007770 1.7e-07 60.8 97 44.3
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.7e-07 60.8 96 45.8
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 1.7e-07 60.8 96 45.8
Sopen06g004820 Solanum pennellii HOM05D007106 ORTHO05D007770 1.7e-07 60.8 77 48.1
Migut.I00186 Erythranthe guttata HOM05D007106 ORTHO05D007770 2.2e-07 60.5 64 50.0
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 2.2e-07 60.5 95 42.1
CsaV3_1G005530 Cucumis sativus L. HOM05D007106 ORTHO05D007770 2.9e-07 60.1 97 44.3
THA.LOC104821419 Tarenaya hassleriana HOM05D012999 ORTHO05D007770 1.1e-06 58.2 96 38.5
CiPaw.12G013000 Carya illinoinensis HOM05D007106 ORTHO05D007770 1.4e-06 57.8 86 41.9
ClCG04G012220 Citrullus lanatus HOM05D007106 ORTHO05D007770 1.4e-06 57.8 97 42.3
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.4e-06 57.8 96 44.8
Lj1g0012300 Lotus japonicus HOM05D007106 ORTHO05D007770 1.9e-06 57.4 85 45.9
Psat5g199960 Pisum sativum HOM05D007106 ORTHO05D007770 1.9e-06 57.4 90 44.4
Aqoxy3G03422 Aquilegia oxysepala HOM05D007106 ORTHO05D007770 7.2e-06 55.5 94 36.2
Lalb_Chr23g0273781 Lupinus albus HOM05D007106 ORTHO05D007770 7.2e-06 55.5 87 40.2
Ah.11g048350 Amaranthus hybridus HOM05D007106 ORTHO05D007770 9.4e-06 55.1 103 40.8


User provided reference genes

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