Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 3.2e-147 525.0 253 100.0
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 2.0e-64 250.0 166 77.1
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 1.8e-41 173.7 150 60.0
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.1e-38 164.5 153 58.2
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 9.2e-38 161.4 149 56.4
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 4.3e-35 152.5 174 55.2
Migut.C00473 Erythranthe guttata HOM05D005317 ORTHO05D005146 7.3e-35 151.8 153 56.9
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.8e-34 149.8 141 52.5
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 1.8e-33 147.1 154 52.6
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 5.2e-33 145.6 120 60.0
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 6.8e-33 145.2 159 57.2
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 1.5e-32 144.1 158 51.9
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.0e-32 143.7 141 54.6
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 4.4e-32 142.5 152 53.9
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 2.9e-31 139.8 154 50.6
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.9e-31 139.0 147 49.7
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.9e-30 137.1 149 51.0
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 4.1e-30 136.0 147 49.7
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 9.2e-30 134.8 147 49.0
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 1.0e-28 131.3 167 47.3
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 3.0e-28 129.8 155 50.3
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 3.0e-28 129.8 169 50.9
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 5.6e-27 125.6 120 55.0
MSTRG.25022 Avicennia marina HOM05D005317 ORTHO05D005146 1.2e-26 124.4 154 50.0
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 2.1e-26 123.6 149 46.3
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 1.1e-25 121.3 145 47.6
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 2.3e-25 120.2 171 43.9
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 2.0e-24 117.1 103 54.4
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 5.8e-24 115.5 147 47.6
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 7.5e-24 115.2 149 45.0
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 1.7e-23 114.0 159 43.4
Oeu030050.1 Olea europaea HOM05D000543 ORTHO05D000396 2.9e-23 113.2 71 74.6
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 1.1e-22 111.3 152 40.8
PGSC0003DMG400004968 Solanum tuberosum HOM05D005317 ORTHO05D005146 1.4e-22 110.9 169 45.6
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 1.4e-22 110.9 146 46.6
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 1.9e-22 110.5 153 45.1
SGA_v2.0_scaffold238G43910 Striga asiatica HOM05D005317 ORTHO05D005146 2.4e-22 110.2 155 45.2
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 3.2e-22 109.8 150 46.7
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 3.2e-22 109.8 145 44.8
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 5.4e-22 109.0 146 47.3
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 7.1e-22 108.6 152 44.1
Gohir.A05G212000 Gossypium hirsutum HOM05D005317 ORTHO05D005146 9.2e-22 108.2 150 44.7
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 4.6e-21 105.9 154 44.8
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 6.0e-21 105.5 158 39.9
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 6.0e-21 105.5 159 40.3
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 1.0e-20 104.8 149 40.3
Actinidia16411 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.3e-20 104.4 140 42.9
Gorai.009G222000 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.3e-20 104.4 142 43.7
DCAR_009867 Daucus carota HOM05D005317 ORTHO05D005146 1.7e-20 104.0 161 45.3
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.7e-20 104.0 142 38.7
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 2.3e-20 103.6 140 44.3
Ciclev10029376m.g Citrus clementina HOM05D005317 ORTHO05D005146 3.0e-20 103.2 179 38.0
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.6e-20 102.1 157 41.4
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 6.6e-20 102.1 157 41.4
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 8.6e-20 101.7 174 40.2
SGA_v2.0_scaffold15G07499 Striga asiatica HOM05D005317 ORTHO05D005146 8.6e-20 101.7 154 40.9
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 1.1e-19 101.3 159 40.9
ATR0739G163 Amborella trichopoda HOM05D005317 ORTHO05D005146 1.5e-19 100.9 167 40.7
FAN26G0581 Fragaria x ananassa HOM05D005317 ORTHO05D005146 1.5e-19 100.9 169 39.6
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 1.5e-19 100.9 145 43.4
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 1.5e-19 100.9 163 39.9
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 1.9e-19 100.5 147 42.9
FvH4_1g18210 Fragaria vesca HOM05D005317 ORTHO05D005146 2.5e-19 100.1 172 39.0
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 2.5e-19 100.1 148 41.2
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.3e-19 99.8 141 37.6
Lj4g0026806 Lotus japonicus HOM05D005317 ORTHO05D005146 3.3e-19 99.8 167 37.1
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 3.3e-19 99.8 141 44.7
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 4.3e-19 99.4 164 38.4
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 4.3e-19 99.4 147 38.8
FAN19G1325 Fragaria x ananassa HOM05D005317 ORTHO05D005146 5.6e-19 99.0 172 38.4
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 7.3e-19 98.6 158 40.5
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 9.5e-19 98.2 164 39.6
FAN28G2997 Fragaria x ananassa HOM05D005317 ORTHO05D005146 1.2e-18 97.8 172 38.4
Lalb_Chr24g0399511 Lupinus albus HOM05D005317 ORTHO05D005146 1.2e-18 97.8 134 44.8
MBI16_g41241_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 1.6e-18 97.4 138 40.6
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 2.1e-18 97.1 152 44.1
FAN23G2069 Fragaria x ananassa HOM05D005317 ORTHO05D005146 2.1e-18 97.1 174 39.7
Aqoxy6G02509 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 4.7e-18 95.9 127 46.5
Gohir.D01G111432 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.2e-18 95.5 142 36.6
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 8.1e-18 95.1 164 38.4
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 8.1e-18 95.1 166 38.6
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.1e-17 94.7 169 37.9
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 1.4e-17 94.4 155 38.1
Manes.05G183600 Manihot esculenta HOM05D005317 ORTHO05D005146 1.4e-17 94.4 147 40.8
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 1.8e-17 94.0 143 43.4
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.8e-17 94.0 167 35.3
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 1.8e-17 94.0 172 37.2
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 6.8e-17 92.0 157 36.3
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 6.8e-17 92.0 142 40.1
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 8.9e-17 91.7 103 51.5
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 1.2e-16 91.3 150 39.3
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.5e-16 90.9 147 42.9
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 2.0e-16 90.5 153 41.2
Gorai.010G027400 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.4e-16 89.7 140 37.1
CiPaw.07G172100 Carya illinoinensis HOM05D005317 ORTHO05D005146 5.8e-16 89.0 141 42.6
Gohir.A06G025700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 7.6e-16 88.6 139 38.1
Gohir.D03G030600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 9.9e-16 88.2 145 42.8
Gohir.D06G022800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 9.9e-16 88.2 140 36.4
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 9.9e-16 88.2 145 40.7
Duzib187G1956 Durio zibethinus HOM05D005317 ORTHO05D005146 1.3e-15 87.8 154 41.6
MSTRG.23654 Avicennia marina HOM05D005317 ORTHO05D005146 2.2e-15 87.0 146 41.1
Gorai.002G136100 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.2e-15 87.0 137 44.5
Gorai.003G032200 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.9e-15 86.7 145 40.7
Atru.chr13.869 Acer truncatum HOM05D011270 ORTHO05D012905 4.9e-15 85.9 160 37.5
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 6.4e-15 85.5 157 38.2
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.1e-14 84.7 164 39.6
Glyma.17G158600 Glycine max HOM05D005317 ORTHO05D005146 1.4e-14 84.3 159 35.2
Cfa013738 Carpinus fangiana HOM05D005317 ORTHO05D005146 1.9e-14 84.0 151 37.7
Ciclev10027255m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.9e-14 84.0 149 42.3
Gohir.A01G123550 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.4e-14 83.6 137 43.8
VMungo1309G2313 Vigna mungo HOM05D005317 ORTHO05D005146 2.4e-14 83.6 139 39.6
CiPaw.07G172000 Carya illinoinensis HOM05D005317 ORTHO05D005146 4.1e-14 82.8 149 40.3
Dinv23042 Davidia involucrata HOM05D005317 ORTHO05D005146 4.1e-14 82.8 135 40.7
CDE07G0499 Ceratophyllum demersum HOM05D000271 ORTHO05D009467 5.4e-14 82.4 146 37.0
Glyma.14G089084 Glycine max HOM05D005317 ORTHO05D005146 5.4e-14 82.4 149 39.6
FAN15G0380 Fragaria x ananassa HOM05D030376 ORTHO05D005146 7.1e-14 82.0 193 34.7
FAN27G2237 Fragaria x ananassa HOM05D030376 ORTHO05D005146 9.2e-14 81.6 182 35.7
Prupe.1G419200 Prunus persica HOM05D005317 ORTHO05D005146 2.1e-13 80.5 154 35.7
MBI16_g06081_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 4.6e-13 79.3 99 43.4
FAN20G0770 Fragaria x ananassa HOM05D030376 ORTHO05D005146 1.0e-12 78.2 184 34.8
Glyma.17G232900 Glycine max HOM05D005317 ORTHO05D005146 1.7e-12 77.4 151 39.1
Gohir.A11G212400 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.7e-12 77.4 159 35.2
Potri.014G012900 Populus trichocarpa HOM05D005317 ORTHO05D005146 3.0e-12 76.6 154 39.6
ClCG01G017790 Citrullus lanatus HOM05D005317 ORTHO05D005146 5.1e-12 75.9 142 38.0
SalBow3G0220 Salvia bowleyana HOM05D005317 ORTHO05D005146 6.6e-12 75.5 144 36.1
Sed0021979 Sechium edule HOM05D005317 ORTHO05D005146 1.9e-11 73.9 145 37.2
Sc24g0002340 Simmondsia chinensis HOM05D005317 ORTHO05D005146 4.3e-11 72.8 137 35.8
Gorai.007G226200 Gossypium raimondii HOM05D005317 ORTHO05D005146 5.6e-11 72.4 153 35.3
CDE04G2604 Ceratophyllum demersum HOM05D000375 ORTHO05D000240 7.3e-11 72.0 160 34.4
Haze_22390 Corylus avellana HOM05D000071 ORTHO05D000029 1.2e-10 71.2 146 38.4
ClCG05G026550 Citrullus lanatus HOM05D029900 ORTHO05D005146 3.6e-10 69.7 147 32.7
FAN24G2816 Fragaria x ananassa HOM05D030376 ORTHO05D005146 4.7e-10 69.3 121 38.0
Actinidia11964 Actinidia chinensis HOM05D031334 ORTHO05D026410 6.2e-10 68.9 113 39.8
PGSC0003DMG400021404 Solanum tuberosum HOM05D061607 ORTHO05D005146 1.4e-09 67.8 159 30.8
Migut.H00325 Erythranthe guttata HOM05D005317 ORTHO05D005146 2.4e-09 67.0 154 33.8
Gohir.D05G215433 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.2e-09 65.9 134 38.8
EL10Ac6g13373 Beta vulgaris HOM05D005317 ORTHO05D005146 6.9e-09 65.5 89 42.7
unitig_749.g13883 Utricularia gibba HOM05D005317 ORTHO05D005146 6.9e-09 65.5 113 37.2
Gohir.D01G111366 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.5e-08 64.3 82 50.0
Phvul.001G030900 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 3.4e-08 63.2 133 36.1
Gohir.A05G212200 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.8e-08 62.4 152 34.2
Rhsim08G0090500 Rhododendron simsii HOM05D005317 ORTHO05D005146 1.7e-07 60.8 155 34.2
Sc02g0008110 Simmondsia chinensis HOM05D005317 ORTHO05D005146 1.7e-07 60.8 157 33.8
C08p13500 Brassica napus HOM05D011270 ORTHO05D012905 2.2e-07 60.5 154 33.1
TPR.G13134 Trifolium pratense HOM05D014755 ORTHO05D005146 2.2e-07 60.5 132 35.6
AUR62037856 Chenopodium quinoa HOM05D051035 ORTHO05D005146 2.9e-07 60.1 88 46.6
CsaV3_6G044310 Cucumis sativus L. HOM05D005317 ORTHO05D005146 2.9e-07 60.1 156 33.3
BcaC07g38551 Brassica carinata HOM05D011270 ORTHO05D012905 3.8e-07 59.7 154 31.2
BolC8t48976H Brassica oleracea HOM05D011270 ORTHO05D012905 3.8e-07 59.7 154 31.2
Sc03g0002520 Simmondsia chinensis HOM05D005317 ORTHO05D005146 3.8e-07 59.7 128 32.0
Sopen12g030250 Solanum pennellii HOM05D061896 ORTHO05D051302 3.8e-07 59.7 80 48.8
PGSC0003DMG400034475 Solanum tuberosum HOM05D061896 ORTHO05D051302 3.8e-07 59.7 76 50.0
HPP92_026659 Vanilla planifolia HOM05D066124 ORTHO05D051582 3.8e-07 59.7 139 36.0
arahy.Tifrunner.gnm1.ann1.K9IMQL Arachis hypogaea HOM05D005317 ORTHO05D005146 4.9e-07 59.3 178 32.0
Ah.02g129000 Amaranthus hybridus HOM05D005317 ORTHO05D005146 6.4e-07 58.9 92 43.5
BcaC05g24800 Brassica carinata HOM05D011270 ORTHO05D012905 6.4e-07 58.9 94 38.3
BcaC07g38545 Brassica carinata HOM05D011270 ORTHO05D012905 6.4e-07 58.9 98 38.8
BolC8t48985H Brassica oleracea HOM05D011270 ORTHO05D012905 6.4e-07 58.9 98 38.8
A08p34120 Brassica napus HOM05D011270 ORTHO05D012905 8.4e-07 58.5 153 32.7
MELO3C016838.2 Cucumis melo HOM05D029900 ORTHO05D005146 8.4e-07 58.5 150 30.7
BraA08t35324Z Brassica rapa HOM05D011270 ORTHO05D012905 1.1e-06 58.2 153 30.7
arahy.Tifrunner.gnm1.ann1.G8H34X Arachis hypogaea HOM05D005317 ORTHO05D005146 1.4e-06 57.8 106 39.6
BcaC07g38553 Brassica carinata HOM05D011270 ORTHO05D012905 1.9e-06 57.4 97 38.1
AUR62041096 Chenopodium quinoa HOM05D051035 ORTHO05D005146 1.9e-06 57.4 102 42.2
VMungo0647G0350 Vigna mungo HOM05D014755 ORTHO05D005146 1.9e-06 57.4 127 34.6
Phvul.009G074100 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 2.4e-06 57.0 138 29.0
Sp1g08810 Schrenkiella parvula HOM05D001270 ORTHO05D001099 3.2e-06 56.6 145 33.8
FAN15G3562 Fragaria x ananassa HOM05D025097 ORTHO05D025563 5.4e-06 55.8 165 30.9
Sed0025721 Sechium edule HOM05D005317 ORTHO05D005146 7.1e-06 55.5 117 41.9
A06p06850 Brassica napus HOM05D011270 ORTHO05D012905 9.3e-06 55.1 149 31.5
BraA06t23899Z Brassica rapa HOM05D011270 ORTHO05D012905 9.3e-06 55.1 149 31.5
CsaV3_4G035270 Cucumis sativus L. HOM05D029900 ORTHO05D005146 9.3e-06 55.1 101 39.6


User provided reference genes

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