Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 1.7e-65 253.1 184 100.0
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 5.4e-48 194.9 179 68.2
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 5.7e-21 105.1 214 38.8
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 3.7e-20 102.4 64 73.4
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 3.1e-19 99.4 200 35.0
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 9.1e-19 97.8 95 54.7
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.0e-17 94.4 87 58.6
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.7e-17 93.6 202 50.0
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.7e-17 93.6 198 37.4
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.2e-17 93.2 62 72.6
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.1e-16 90.9 63 68.3
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.9e-16 90.1 198 36.4
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.5e-16 89.7 93 54.8
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 4.2e-16 89.0 55 80.0
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 4.2e-16 89.0 86 54.7
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 5.5e-16 88.6 215 31.6
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 7.2e-16 88.2 59 66.1
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 1.2e-15 87.4 193 34.7
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 1.6e-15 87.0 63 68.3
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 1.6e-15 87.0 74 58.1
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.1e-15 86.7 215 30.7
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 2.1e-15 86.7 61 65.6
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 2.7e-15 86.3 214 34.1
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 2.7e-15 86.3 85 52.9
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 2.7e-15 86.3 193 34.2
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 4.7e-15 85.5 55 67.3
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 7.9e-15 84.7 66 60.6
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 3.0e-14 82.8 86 51.2
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 5.1e-14 82.0 97 47.4
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 5.1e-14 82.0 97 47.4
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 1.1e-13 80.9 85 50.6
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 1.5e-13 80.5 59 66.1
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 1.5e-13 80.5 54 74.1
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 2.6e-13 79.7 61 63.9
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 2.6e-13 79.7 65 61.5
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 3.3e-13 79.3 75 61.3
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 3.3e-13 79.3 53 73.6
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 2.2e-12 76.6 63 58.7
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 2.4e-11 73.2 63 58.7
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 5.3e-11 72.0 64 54.7
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 7.0e-11 71.6 63 55.6
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 1.2e-10 70.9 90 44.4
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 1.6e-10 70.5 63 57.1
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 2.0e-10 70.1 63 54.0
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 2.6e-10 69.7 62 56.5
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 3.5e-10 69.3 58 53.4
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 3.5e-10 69.3 63 57.1
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 5.9e-10 68.6 62 58.1
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 5.9e-10 68.6 64 53.1
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 7.7e-10 68.2 81 46.9
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 7.7e-10 68.2 81 46.9
HPP92_007654 Vanilla planifolia HOM05D007827 ORTHO05D009749 7.7e-10 68.2 65 50.8
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 2.2e-09 66.6 188 30.9
HPP92_009146 Vanilla planifolia HOM05D007827 ORTHO05D009749 2.9e-09 66.2 84 39.3
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 3.8e-09 65.9 45 62.2
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 6.5e-09 65.1 59 55.9
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 8.5e-09 64.7 63 47.6
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 1.1e-08 64.3 64 53.1
MBI04_g36906_MAGBIO Magnolia biondii HOM05D007827 ORTHO05D009749 1.1e-08 64.3 91 42.9
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 1.5e-08 63.9 62 51.6
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 1.9e-08 63.5 41 68.3
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 1.9e-08 63.5 60 56.7
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 1.9e-08 63.5 62 53.2
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 4.2e-08 62.4 62 51.6
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 5.5e-08 62.0 60 50.0
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 7.2e-08 61.6 83 41.0
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 9.4e-08 61.2 62 56.5
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 1.2e-07 60.8 81 43.2
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 1.2e-07 60.8 62 51.6
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 1.2e-07 60.8 64 46.9
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 1.6e-07 60.5 63 54.0
Gohir.A05G040950 Gossypium hirsutum HOM05D007827 ORTHO05D009749 2.1e-07 60.1 60 46.7
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 3.6e-07 59.3 63 49.2
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea HOM05D007827 ORTHO05D009749 1.0e-06 57.8 50 54.0
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 1.0e-06 57.8 42 61.9
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 1.8e-06 57.0 50 54.0
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 2.3e-06 56.6 192 28.1
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 6.7e-06 55.1 49 55.1
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 8.8e-06 54.7 64 43.8


User provided reference genes

Program Settings