Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046935.1 Olea europaea HOM05D004836 ORTHO05D005150 0.0e+00 3263.4 1727 100.0
Oeu014362.2 Olea europaea HOM05D004836 ORTHO05D005150 0.0e+00 2187.1 1726 71.3
Dinv10337 Davidia involucrata HOM05D004836 ORTHO05D005150 2.1e-210 737.6 1754 37.7
Migut.M01650 Erythranthe guttata HOM05D004836 ORTHO05D005150 6.9e-177 626.3 1870 33.7
Dinv40862 Davidia involucrata HOM05D004836 ORTHO05D005150 1.3e-170 605.5 1760 34.3
CSS0029600 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 1.4e-166 592.0 1617 32.7
Peaxi162Scf00139g01321 Petunia axillaris HOM05D004836 ORTHO05D005150 2.8e-162 577.8 1711 32.0
Nitab4.5_0007415g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 3.7e-162 577.4 1932 32.4
Nitab4.5_0002736g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 9.0e-161 572.8 1956 32.8
Cc05_g14960 Coffea canephora HOM05D004836 ORTHO05D005150 2.2e-159 568.2 1634 33.0
SGA_v2.0_scaffold171G38861 Striga asiatica HOM05D004836 ORTHO05D005150 3.8e-159 567.4 1771 34.5
CAN.G623.12 Capsicum annuum HOM05D004836 ORTHO05D005150 5.3e-153 547.0 1800 30.9
SGA_v2.0_scaffold168G38564 Striga asiatica HOM05D004836 ORTHO05D005150 9.4e-150 536.2 1766 33.7
Actinidia37154 Actinidia chinensis HOM05D004836 ORTHO05D005150 8.2e-146 523.1 1621 31.9
Sopen07g033810 Solanum pennellii HOM05D004836 ORTHO05D005150 1.1e-145 522.7 1906 31.3
Solyc07g065600.3 Solanum lycopersicum HOM05D004836 ORTHO05D005150 1.4e-145 522.3 1904 31.2
Actinidia05002 Actinidia chinensis HOM05D004836 ORTHO05D005150 1.0e-140 506.1 1730 31.5
GSVIVG01014692001 Vitis vinifera HOM05D004836 ORTHO05D005150 2.6e-136 491.5 1675 31.4
Rhsim06G0230000 Rhododendron simsii HOM05D004836 ORTHO05D005150 5.3e-129 467.2 1713 29.9
TAR626G1210 Trochodendron aralioides HOM05D004836 ORTHO05D005150 1.8e-124 452.2 1638 30.9
Haze_09829 Corylus avellana HOM05D004836 ORTHO05D005150 1.7e-119 435.6 1731 29.8
TAR624G0729 Trochodendron aralioides HOM05D004836 ORTHO05D005150 2.3e-111 408.7 1640 29.0
PGSC0003DMG400022276 Solanum tuberosum HOM05D004836 ORTHO05D005150 4.4e-107 394.4 856 41.5
CiPaw.11G204300 Carya illinoinensis HOM05D004836 ORTHO05D005150 4.9e-106 391.0 1804 30.4
QL08p004015 Quercus lobata HOM05D004836 ORTHO05D005150 3.9e-103 381.3 1702 29.8
Thecc.07G013200 Theobroma cacao HOM05D004836 ORTHO05D005150 1.8e-100 372.5 1813 29.9
Rhsim04G0012500 Rhododendron simsii HOM05D004836 ORTHO05D005150 1.1e-92 346.7 1617 27.6
Duzib213G0869 Durio zibethinus HOM05D004836 ORTHO05D005150 1.4e-92 346.3 1762 28.7
Potri.001G368200 Populus trichocarpa HOM05D004836 ORTHO05D005150 2.7e-88 332.0 1670 27.2
DCAR_013235 Daucus carota HOM05D004836 ORTHO05D005150 6.0e-88 330.9 1872 26.3
Gorai.002G100500 Gossypium raimondii HOM05D004836 ORTHO05D005150 4.4e-83 314.7 1704 26.1
TWI38G0981 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 5.8e-83 314.3 1632 26.9
Sabra16G0241300 Salix brachista HOM05D004836 ORTHO05D005150 3.2e-81 308.5 1744 27.4
MD03G1024600 Malus domestica HOM05D004836 ORTHO05D005150 2.1e-80 305.8 1732 27.0
Nn1g03169 Nelumbo nucifera HOM05D004836 ORTHO05D005150 1.7e-79 302.8 1621 26.8
MD11G1029700 Malus domestica HOM05D004836 ORTHO05D005150 2.3e-79 302.4 1730 27.1
Gohir.D01G061900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 3.3e-78 298.5 1707 26.0
Prupe.5G032900 Prunus persica HOM05D004836 ORTHO05D005150 2.1e-77 295.8 1635 26.9
Prupe.7G022200 Prunus persica HOM05D004836 ORTHO05D005150 1.8e-76 292.7 1634 27.2
Gohir.A13G132500 Gossypium hirsutum HOM05D004836 ORTHO05D005150 2.9e-74 285.4 1703 26.8
CSS0003147 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 4.9e-74 284.6 350 51.4
Gorai.013G152400 Gossypium raimondii HOM05D004836 ORTHO05D005150 2.4e-73 282.3 1714 26.5
Sc03g0011330 Simmondsia chinensis HOM05D004836 ORTHO05D005150 1.2e-72 280.0 1679 26.0
Sc03g0011420 Simmondsia chinensis HOM05D004836 ORTHO05D005150 6.0e-72 277.7 1684 26.8
Lsat_1_v5_gn_9_90560 Lactuca sativa HOM05D004836 ORTHO05D005150 7.8e-72 277.3 1638 26.5
MBI15_g03895_MAGBIO Magnolia biondii HOM05D004836 ORTHO05D005150 1.5e-70 273.1 1666 27.0
Ciclev10007227m.g Citrus clementina HOM05D004836 ORTHO05D005150 2.8e-69 268.9 1858 26.0
Sc16g0008100 Simmondsia chinensis HOM05D004836 ORTHO05D005150 2.4e-68 265.8 1719 26.5
PGR083G2228 Punica granatum HOM05D004836 ORTHO05D005150 2.1e-64 252.7 1648 26.5
Manes.03G141700 Manihot esculenta HOM05D004836 ORTHO05D005150 1.3e-63 250.0 1616 26.1
COL.COLO4_09837 Corchorus olitorius HOM05D004836 ORTHO05D005150 1.1e-62 246.9 1622 26.4
vmacro11592 Vaccinium macrocarpon HOM05D004836 ORTHO05D005150 4.3e-62 245.0 840 29.5
CANSAT11G1576 Cannabis sativa HOM05D004836 ORTHO05D005150 1.1e-60 240.4 1945 26.6
RcHm_v2.0_Chr1g0333641 Rosa chinensis HOM05D004836 ORTHO05D005150 5.3e-60 238.0 1667 25.1
HanXRQChr13g0408421 Helianthus annuus HOM05D004836 ORTHO05D005150 6.9e-60 237.7 1624 26.0
Atru.chr2.3693 Acer truncatum HOM05D004836 ORTHO05D005150 2.0e-59 236.1 421 42.8
Lj5g0000015 Lotus japonicus HOM05D004836 ORTHO05D005150 2.6e-59 235.7 1636 26.0
Lj1A890T52 Lonicera japonica HOM05D004836 ORTHO05D005150 5.8e-59 234.6 508 37.4
FAN10G2990 Fragaria x ananassa HOM05D004836 ORTHO05D005150 1.1e-57 230.3 1740 25.6
arahy.Tifrunner.gnm1.ann1.D5NCPP Arachis hypogaea HOM05D004836 ORTHO05D005150 1.4e-57 229.9 1621 24.7
Gohir.A01G091700 Gossypium hirsutum HOM05D004836 ORTHO05D005150 1.0e-55 223.8 1597 24.7
arahy.Tifrunner.gnm1.ann1.LI7RG4 Arachis hypogaea HOM05D004836 ORTHO05D005150 8.7e-55 220.7 1627 24.5
FAN06G1091 Fragaria x ananassa HOM05D004836 ORTHO05D005150 3.3e-54 218.8 1734 25.4
FAN01G1635 Fragaria x ananassa HOM05D004836 ORTHO05D005150 1.8e-52 213.0 1744 25.2
ECA240G1942 Erigeron canadensis HOM05D004836 ORTHO05D000368 1.2e-51 210.3 1569 24.3
Phvul.007G023800 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 1.2e-51 210.3 1685 25.3
THA.LOC104811669 Tarenaya hassleriana HOM05D004836 ORTHO05D005150 2.6e-51 209.1 1723 24.8
Sed0002835 Sechium edule HOM05D004836 ORTHO05D005150 4.5e-51 208.4 1674 25.4
Manes.15G059500 Manihot esculenta HOM05D004836 ORTHO05D005150 2.9e-50 205.7 1619 24.2
FvH4_7g06090 Fragaria vesca HOM05D004836 ORTHO05D005150 4.9e-50 204.9 414 38.6
Glyma.10G277400 Glycine max HOM05D004836 ORTHO05D005150 8.4e-50 204.1 1638 25.3
VMungo0720G3177 Vigna mungo HOM05D004836 ORTHO05D005150 1.9e-49 203.0 1636 25.1
FAN03G2987 Fragaria x ananassa HOM05D004836 ORTHO05D005150 2.3e-47 196.1 504 34.5
Phvul.003G265300 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 2.3e-47 196.1 1602 24.8
Glyma.20G112200 Glycine max HOM05D004836 ORTHO05D005150 1.1e-46 193.7 1645 24.9
Gohir.D13G135900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 1.5e-46 193.4 1547 25.3
CsaV3_7G011380 Cucumis sativus L. HOM05D004836 ORTHO05D005150 5.7e-46 191.4 443 38.1
HanXRQChr03g0074011 Helianthus annuus HOM05D004836 ORTHO05D005150 9.6e-46 190.7 429 38.7
Aqoxy4G02292 Aquilegia oxysepala HOM05D004836 ORTHO05D005150 2.1e-45 189.5 1654 24.4
CANSAT35G0529 Cannabis sativa HOM05D004836 ORTHO05D005150 2.8e-45 189.1 502 32.9
Cpa.g.sc12.114 Carica papaya HOM05D004836 ORTHO05D005150 4.1e-44 185.3 681 29.7
Lalb_Chr21g0309081 Lupinus albus HOM05D004836 ORTHO05D005150 4.5e-43 181.8 1622 24.0
MELO3C024947.2 Cucumis melo HOM05D004836 ORTHO05D005150 5.9e-43 181.4 451 36.8
ClCG09G021380 Citrullus lanatus HOM05D004836 ORTHO05D005150 8.5e-42 177.6 461 36.0
Eucgr.F02046 Eucalyptus grandis HOM05D004836 ORTHO05D005150 5.5e-41 174.9 441 35.8
Hma1.2p1_1109F.1_g258180 Hydrangea macrophylla HOM05D004836 ORTHO05D005150 2.1e-40 172.9 287 41.8
Ca_25650_v3 Cicer arietinum L. HOM05D004836 ORTHO05D005150 6.7e-39 167.9 1622 24.0
Hund23108 Selenicereus undatus HOM05D004836 ORTHO05D005150 4.3e-38 165.2 402 35.8
Lalb_Chr06g0166281 Lupinus albus HOM05D004836 ORTHO05D005150 5.7e-38 164.9 1630 24.6
TPR.G26309 Trifolium pratense HOM05D004836 ORTHO05D005150 2.4e-36 159.5 1595 23.7
EL10Ac4g07562 Beta vulgaris HOM05D004836 ORTHO05D005150 4.1e-36 158.7 448 33.9
Sed0003689 Sechium edule HOM05D004836 ORTHO05D005150 2.2e-34 152.9 415 34.9
CARHR269190 Cardamine hirsuta HOM05D004836 ORTHO05D005150 3.2e-33 149.1 409 34.0
TWI39G0854 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 1.6e-32 146.7 245 45.3
Lj1A890T51 Lonicera japonica HOM05D004836 ORTHO05D005150 2.1e-32 146.4 1083 23.6
CDE04G0223 Ceratophyllum demersum HOM05D000588 ORTHO05D005150 1.8e-31 143.3 479 31.9
Medtr1g111660 Medicago truncatula HOM05D004836 ORTHO05D005150 1.8e-31 143.3 1624 22.7
Carub.0008s1617 Capsella rubella HOM05D004836 ORTHO05D005150 2.3e-31 142.9 445 33.3
Thhalv10012421m.g Eutrema salsugineum HOM05D004836 ORTHO05D005150 2.3e-31 142.9 408 33.6
Aa31LG3G11720 Aethionema arabicum HOM05D004836 ORTHO05D005150 6.7e-31 141.4 1723 23.3
Hund20644 Selenicereus undatus HOM05D004836 ORTHO05D005150 6.7e-31 141.4 1656 23.7
AL8G31380 Arabidopsis lyrata HOM05D004836 ORTHO05D005150 8.8e-31 141.0 444 33.1
AT5G55820 Arabidopsis thaliana HOM05D004836 ORTHO05D005150 1.5e-30 140.2 409 33.3
AUR62036461 Chenopodium quinoa HOM05D004836 ORTHO05D005150 5.7e-30 138.3 1718 22.2
MD00G1168400 Malus domestica HOM05D004836 ORTHO05D005150 7.4e-30 137.9 270 42.6
MD11G1030200 Malus domestica HOM05D004836 ORTHO05D005150 9.7e-30 137.5 261 43.3
TWI39G0173 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 2.8e-29 136.0 185 45.9
AUR62017108 Chenopodium quinoa HOM05D004836 ORTHO05D005150 5.3e-28 131.7 403 33.7
Sp6g17700 Schrenkiella parvula HOM05D004836 ORTHO05D005150 2.6e-27 129.4 1756 22.8
ATR0751G141 Amborella trichopoda HOM05D004836 ORTHO05D005150 1.0e-26 127.5 455 33.4
Ah.06g181450 Amaranthus hybridus HOM05D004836 ORTHO05D005150 1.9e-25 123.2 494 29.6
unitig_22.g5946 Utricularia gibba HOM05D004836 ORTHO05D005150 3.2e-25 122.5 269 36.8
BolC3t14046H Brassica oleracea HOM05D004836 ORTHO05D005150 7.2e-25 121.3 1688 23.5
AUR62006337 Chenopodium quinoa HOM05D004836 ORTHO05D005150 7.2e-25 121.3 525 29.5
C03p16240 Brassica napus HOM05D004836 ORTHO05D005150 4.7e-24 118.6 1701 23.2
Psat6g230520 Pisum sativum HOM05D004836 ORTHO05D005150 2.3e-23 116.3 1627 22.9
BraA03t10683Z Brassica rapa HOM05D004836 ORTHO05D005150 3.9e-23 115.5 1757 22.9
AUR62044127 Chenopodium quinoa HOM05D004836 ORTHO05D005150 1.4e-20 107.1 312 33.0
Actinidia30401 Actinidia chinensis HOM05D004836 ORTHO05D005150 9.1e-20 104.4 66 77.3
arahy.Tifrunner.gnm1.ann1.TB163P Arachis hypogaea HOM05D004836 ORTHO05D005150 9.1e-20 104.4 291 33.0
A03p13800 Brassica napus HOM05D004836 ORTHO05D005150 1.5e-17 97.1 1703 22.8
ATR0712G030 Amborella trichopoda HOM05D004836 ORTHO05D005150 4.7e-16 92.0 191 35.6
BcaC01g06394 Brassica carinata HOM05D004836 ORTHO05D005150 2.3e-15 89.7 74 54.1
Os09g0477700 Oryza sativa ssp. japonica HOM05D028105 ORTHO05D005150 3.0e-15 89.4 651 26.4
TWI39G0060 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 3.3e-14 85.9 207 31.9
Psat2g132080 Pisum sativum HOM05D004836 ORTHO05D005150 1.3e-13 84.0 186 34.9
BcaB08g35940 Brassica carinata HOM05D004836 ORTHO05D005150 1.8e-12 80.1 413 24.5
HPP92_018201 Vanilla planifolia HOM05D004836 ORTHO05D005150 1.8e-12 80.1 546 25.5
CDE02G4444 Ceratophyllum demersum HOM05D004836 ORTHO05D005150 2.4e-12 79.7 331 26.3
MD03G1025800 Malus domestica HOM05D004836 ORTHO05D005150 1.2e-11 77.4 86 57.0
BolC2t07687H Brassica oleracea HOM05D000026 ORTHO05D017167 3.5e-11 75.9 132 36.4
RhsimUnG0156400 Rhododendron simsii HOM05D000074 ORTHO05D001262 4.5e-11 75.5 49 69.4
Zm00001eb316050 Zea mays HOM05D028105 ORTHO05D005150 2.9e-10 72.8 387 28.4
HanXRQChr03g0074021 Helianthus annuus HOM05D004836 ORTHO05D005150 1.1e-09 70.9 60 53.3
Cpa.g.c38368 Carica papaya HOM05D004836 ORTHO05D005150 4.2e-09 68.9 46 65.2
PSO541G5284 Papaver somniferum HOM05D004836 ORTHO05D005150 1.2e-08 67.4 1736 22.4
vmacro11593 Vaccinium macrocarpon HOM05D004836 ORTHO05D005150 1.0e-07 64.3 48 83.3
C02p15810 Brassica napus HOM05D004836 ORTHO05D017167 1.4e-07 63.9 202 30.2
BcaB08g35941 Brassica carinata HOM05D004836 ORTHO05D005150 3.0e-07 62.8 315 25.1
CDE02G2584 Ceratophyllum demersum HOM05D004836 ORTHO05D005150 3.0e-07 62.8 53 66.0
SEGI_04158 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 8.8e-07 61.2 262 32.1
SEGI_26437 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 2.0e-06 60.1 236 33.9
MBI14_g10145_MAGBIO Magnolia biondii HOM05D004836 ORTHO05D005150 7.5e-06 58.2 64 46.9


User provided reference genes

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