Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046929.1 Olea europaea HOM05D005129 ORTHO05D005585 0.0e+00 1784.2 909 100.0
CSS0016153 Camellia sinensis var. sinensis HOM05D005129 ORTHO05D005585 1.2e-167 594.7 917 43.5
Migut.M00948 Erythranthe guttata HOM05D005129 ORTHO05D005585 5.1e-163 579.3 883 44.7
Cc09_g07500 Coffea canephora HOM05D005129 ORTHO05D005585 2.4e-152 543.9 898 42.0
SalBow8G1057 Salvia bowleyana HOM05D005129 ORTHO05D005585 6.7e-147 525.8 881 41.4
SGA_v2.0_scaffold333G49012 Striga asiatica HOM05D005129 ORTHO05D005585 1.3e-137 495.0 760 45.0
TAR626G1389 Trochodendron aralioides HOM05D005129 ORTHO05D005585 2.1e-137 494.2 961 38.1
Nitab4.5_0002094g0030 Nicotiana tabacum HOM05D005129 ORTHO05D005585 3.1e-136 490.3 895 39.9
Potri.001G463700 Populus trichocarpa HOM05D005129 ORTHO05D005585 9.0e-136 488.8 912 39.3
Lj1C1160T1 Lonicera japonica HOM05D005129 ORTHO05D005585 1.5e-135 488.0 1003 37.0
Potri.011G161901 Populus trichocarpa HOM05D005129 ORTHO05D005585 2.9e-134 483.8 919 38.8
Nitab4.5_0000076g0130 Nicotiana tabacum HOM05D005129 ORTHO05D005585 1.6e-132 478.0 908 39.6
Cfa000799 Carpinus fangiana HOM05D005129 ORTHO05D005585 2.7e-132 477.2 899 39.2
Sopen02g006450 Solanum pennellii HOM05D005129 ORTHO05D005585 4.3e-130 469.9 887 39.1
SGA_v2.0_scaffold1G00142 Striga asiatica HOM05D005129 ORTHO05D005585 4.3e-130 469.9 899 39.9
QL05p063822 Quercus lobata HOM05D005129 ORTHO05D005585 7.4e-130 469.2 906 38.1
Haze_05902 Corylus avellana HOM05D005129 ORTHO05D005585 2.2e-129 467.6 897 38.8
Solyc07g041330.3 Solanum lycopersicum HOM05D005129 ORTHO05D005585 1.2e-127 461.8 877 39.5
Sabra11G0141700 Salix brachista HOM05D005129 ORTHO05D005585 1.0e-126 458.8 935 36.6
Thecc.06G015200 Theobroma cacao HOM05D005129 ORTHO05D005585 1.1e-125 455.3 907 37.6
Dinv27170 Davidia involucrata HOM05D005129 ORTHO05D005585 9.4e-125 452.2 618 45.5
TWI63G1468 Tripterygium wilfordii HOM05D005129 ORTHO05D005585 6.1e-124 449.5 908 36.6
Rhsim06G0213800 Rhododendron simsii HOM05D005129 ORTHO05D005585 1.0e-123 448.7 924 38.3
Ciclev10014031m.g Citrus clementina HOM05D005129 ORTHO05D005585 5.1e-123 446.4 894 38.0
GSVIVG01035591001 Vitis vinifera HOM05D005129 ORTHO05D005585 5.3e-120 436.4 866 37.6
Atru.chr3.3029 Acer truncatum HOM05D005129 ORTHO05D005585 2.0e-119 434.5 861 37.5
Peaxi162Scf01909g00118 Petunia axillaris HOM05D005129 ORTHO05D005585 1.3e-118 431.8 880 38.1
Rhsim03G0093400 Rhododendron simsii HOM05D005129 ORTHO05D005585 1.2e-116 425.2 921 36.8
TAR633G0821 Trochodendron aralioides HOM05D005129 ORTHO05D005585 3.9e-115 420.2 709 39.9
Solyc02g022870.4 Solanum lycopersicum HOM05D005129 ORTHO05D005585 6.7e-115 419.5 855 37.5
Prupe.4G095800 Prunus persica HOM05D005129 ORTHO05D005585 8.8e-115 419.1 909 36.4
Gohir.A10G007300 Gossypium hirsutum HOM05D005129 ORTHO05D005585 2.6e-114 417.5 899 36.6
CiPaw.09G143100 Carya illinoinensis HOM05D005129 ORTHO05D005585 1.7e-113 414.8 830 37.3
Gorai.009G117400 Gossypium raimondii HOM05D005129 ORTHO05D005585 6.3e-113 412.9 900 35.4
CANSAT35G1118 Cannabis sativa HOM05D005129 ORTHO05D005585 3.1e-112 410.6 884 34.4
Gohir.D10G007200 Gossypium hirsutum HOM05D005129 ORTHO05D005585 3.1e-112 410.6 899 36.3
Sopen07g020720 Solanum pennellii HOM05D005129 ORTHO05D005585 3.1e-112 410.6 792 38.5
Gohir.A05G112850 Gossypium hirsutum HOM05D005129 ORTHO05D005585 3.5e-111 407.1 901 35.3
Nn1g08322 Nelumbo nucifera HOM05D005129 ORTHO05D005585 4.5e-111 406.8 934 35.0
Manes.06G058900 Manihot esculenta HOM05D005129 ORTHO05D005585 1.3e-110 405.2 912 34.9
vmacro03361 Vaccinium macrocarpon HOM05D005129 ORTHO05D005585 2.9e-110 404.1 916 36.0
Cpa.g.sc166.48 Carica papaya HOM05D005129 ORTHO05D005585 1.1e-109 402.1 910 35.3
FAN16G1113 Fragaria x ananassa HOM05D005129 ORTHO05D005585 9.4e-109 399.1 888 35.0
CsaV3_1G037120 Cucumis sativus L. HOM05D005129 ORTHO05D005585 2.7e-108 397.5 915 34.6
Gorai.011G007900 Gossypium raimondii HOM05D005129 ORTHO05D005585 2.7e-108 397.5 899 35.7
Sed0027997 Sechium edule HOM05D005129 ORTHO05D005585 4.7e-108 396.7 922 34.6
FAN25G2195 Fragaria x ananassa HOM05D005129 ORTHO05D005585 1.4e-107 395.2 903 34.9
FAN21G1521 Fragaria x ananassa HOM05D005129 ORTHO05D005585 3.0e-107 394.0 888 34.8
MELO3C002837.2 Cucumis melo HOM05D005129 ORTHO05D005585 7.4e-106 389.4 915 35.0
ClCG03G008270 Citrullus lanatus HOM05D005129 ORTHO05D005585 3.7e-105 387.1 918 33.8
MD10G1247500 Malus domestica HOM05D005129 ORTHO05D005585 4.1e-104 383.6 843 35.6
MD05G1268800 Malus domestica HOM05D005129 ORTHO05D005585 2.0e-103 381.3 880 34.2
RcHm_v2.0_Chr5g0017511 Rosa chinensis HOM05D005129 ORTHO05D005585 2.6e-103 380.9 841 34.5
FvH4_3g10781 Fragaria vesca HOM05D005129 ORTHO05D005585 7.7e-103 379.4 885 33.6
FAN11G1468 Fragaria x ananassa HOM05D005129 ORTHO05D005585 3.8e-102 377.1 898 33.6
PGR083G2529 Punica granatum HOM05D005129 ORTHO05D005585 9.4e-101 372.5 891 33.9
Gohir.D05G113300 Gossypium hirsutum HOM05D005129 ORTHO05D005585 6.1e-100 369.8 845 33.8
CAN.G39.32 Capsicum annuum HOM05D005129 ORTHO05D000007 3.0e-99 367.5 760 37.9
DCAR_003834 Daucus carota HOM05D005129 ORTHO05D005585 7.7e-95 352.8 842 34.7
PSO541G3520 Papaver somniferum HOM05D005129 ORTHO05D005585 8.5e-94 349.4 900 33.1
VMungo0647G0154 Vigna mungo HOM05D005129 ORTHO05D005585 1.0e-86 325.9 893 32.8
MBI18_g10016_MAGBIO Magnolia biondii HOM05D005129 ORTHO05D005585 2.3e-86 324.7 970 31.4
Glyma.02G281900 Glycine max HOM05D005129 ORTHO05D005585 9.5e-85 319.3 893 31.0
Glyma.14G032500 Glycine max HOM05D005129 ORTHO05D005585 9.5e-85 319.3 881 31.9
arahy.Tifrunner.gnm1.ann1.LUZ6WJ Arachis hypogaea HOM05D005129 ORTHO05D005585 1.4e-83 315.5 919 30.1
Medtr2g031380 Medicago truncatula HOM05D005129 ORTHO05D005585 1.8e-83 315.1 871 32.1
Sc19g0000270 Simmondsia chinensis HOM05D005129 ORTHO05D005585 5.7e-82 310.1 787 32.3
arahy.Tifrunner.gnm1.ann1.40GDTE Arachis hypogaea HOM05D005129 ORTHO05D005585 1.7e-81 308.5 910 30.3
MELO3C033745.2 Cucumis melo HOM05D005129 ORTHO05D005585 2.4e-80 304.7 716 34.1
TPR.G22269 Trifolium pratense HOM05D005129 ORTHO05D005585 2.4e-80 304.7 898 32.9
Phvul.008G197100 Phaseolus vulgaris HOM05D005129 ORTHO05D005585 3.2e-80 304.3 870 31.4
Hund21086 Selenicereus undatus HOM05D005129 ORTHO05D005585 2.0e-79 301.6 874 30.0
ECA246G0263 Erigeron canadensis HOM05D005129 ORTHO05D005585 2.5e-77 294.7 786 31.4
Ca_00871_v3 Cicer arietinum L. HOM05D005129 ORTHO05D005585 5.6e-77 293.5 896 31.2
Aqoxy1G02020_Aqoxy1G02021 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 9.5e-77 292.7 929 29.8
THA.LOC104812690 Tarenaya hassleriana HOM05D005129 ORTHO05D005585 3.4e-74 284.3 930 29.0
Lalb_Chr04g0249051 Lupinus albus HOM05D005129 ORTHO05D005585 4.4e-74 283.9 831 30.1
LjContig00049g0025087 Lotus japonicus HOM05D005129 ORTHO05D005585 4.9e-73 280.4 802 32.4
AUR62005921 Chenopodium quinoa HOM05D005129 ORTHO05D005585 1.4e-72 278.9 887 29.8
CiPaw.16G039600 Carya illinoinensis HOM05D005129 ORTHO05D005585 3.2e-72 277.7 884 30.2
AUR62028142 Chenopodium quinoa HOM05D005129 ORTHO05D005585 1.0e-70 272.7 884 29.8
Lsat_1_v5_gn_3_43520 Lactuca sativa HOM05D005129 ORTHO05D005585 6.6e-70 270.0 851 29.8
EL10Ac3g05106 Beta vulgaris HOM05D005129 ORTHO05D005585 4.3e-69 267.3 889 30.1
Sp4g17070 Schrenkiella parvula HOM05D005129 ORTHO05D005585 4.0e-67 260.8 884 29.4
unitig_748.g7646 Utricularia gibba HOM05D005129 ORTHO05D005585 5.2e-67 260.4 673 31.2
ATR0763G237 Amborella trichopoda HOM05D005129 ORTHO05D005585 4.9e-65 253.8 925 28.3
Ah.13g071200 Amaranthus hybridus HOM05D005129 ORTHO05D005585 6.6e-62 243.4 894 29.6
HanXRQChr03g0080681 Helianthus annuus HOM05D005129 ORTHO05D005585 1.9e-61 241.9 868 26.6
AL4G30770 Arabidopsis lyrata HOM05D005129 ORTHO05D005585 1.6e-60 238.8 879 28.9
CARHR128940 Cardamine hirsuta HOM05D005129 ORTHO05D005585 1.4e-59 235.7 835 28.7
AT2G34780 Arabidopsis thaliana HOM05D005129 ORTHO05D005585 2.6e-58 231.5 891 28.6
C04p13980 Brassica napus HOM05D005129 ORTHO05D005585 1.7e-57 228.8 878 28.1
BolC4t22987H Brassica oleracea HOM05D005129 ORTHO05D005585 2.2e-57 228.4 878 28.1
Thhalv10016158m.g Eutrema salsugineum HOM05D005129 ORTHO05D005585 4.9e-57 227.3 880 27.8
BcaC02g11559 Brassica carinata HOM05D005129 ORTHO05D005585 6.4e-57 226.9 876 27.4
FAN25G0785 Fragaria x ananassa HOM05D005129 ORTHO05D005585 1.6e-55 222.2 855 27.0
BraA05t20033Z Brassica rapa HOM05D005129 ORTHO05D005585 7.8e-55 219.9 876 27.6
A05p10880 Brassica napus HOM05D005129 ORTHO05D005585 1.5e-53 215.7 876 27.3
BcaB02g09508 Brassica carinata HOM05D005129 ORTHO05D005585 5.6e-53 213.8 874 26.9
BcaC01g05762 Brassica carinata HOM05D005129 ORTHO05D005585 4.7e-52 210.7 871 27.1
Aa31LG10G6520 Aethionema arabicum HOM05D005129 ORTHO05D005585 1.4e-51 209.1 802 29.6
BcaB06g28799 Brassica carinata HOM05D005129 ORTHO05D005585 1.5e-50 205.7 490 33.5
Aqoxy7G00170 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 1.9e-48 198.7 403 36.5
Aqoxy7G00166 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 3.2e-48 198.0 403 36.5
Aqoxy88s004 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 3.2e-48 198.0 403 36.5
BolC4t27871H Brassica oleracea HOM05D005129 ORTHO05D005585 9.3e-48 196.4 851 26.6
CDE06G2236 Ceratophyllum demersum HOM05D005129 ORTHO05D005585 3.5e-47 194.5 978 25.9
Carub.0004s1647 Capsella rubella HOM05D005129 ORTHO05D005585 6.6e-46 190.3 659 29.0
Dinv27171 Davidia involucrata HOM05D005129 ORTHO05D005585 3.4e-42 177.9 244 46.3
Zm00001eb152060 Zea mays HOM05D005129 ORTHO05D005585 2.1e-36 158.7 734 25.7
Ah.13g069630 Amaranthus hybridus HOM05D005129 ORTHO05D005585 2.6e-34 151.8 350 35.1
Psat1g165880 Pisum sativum HOM05D005129 ORTHO05D005585 3.4e-34 151.4 595 28.1
C03p22490 Brassica napus HOM05D002581 ORTHO05D002828 7.6e-34 150.2 635 27.2
SHI24815 Sapria himalayana HOM05D005129 ORTHO05D005585 1.9e-32 145.6 493 29.4
TPR.G8782 Trifolium pratense HOM05D000048 ORTHO05D004674 4.3e-29 134.4 286 33.6
Actinidia00605 Actinidia chinensis HOM05D005129 ORTHO05D005585 8.1e-28 130.2 159 47.2
Os01g0768700 Oryza sativa ssp. japonica HOM05D005129 ORTHO05D005585 5.8e-26 124.0 382 28.0
Eucgr.D00092 Eucalyptus grandis HOM05D005129 ORTHO05D005585 2.9e-25 121.7 450 29.3
PGSC0003DMG400003904 Solanum tuberosum HOM05D009171 ORTHO05D000440 4.9e-25 120.9 259 37.1
HPP92_022552 Vanilla planifolia HOM05D005129 ORTHO05D005585 8.4e-25 120.2 330 29.7
Medtr5g090200 Medicago truncatula HOM05D005129 ORTHO05D005585 1.4e-24 119.4 282 33.0
BraA04t18160Z Brassica rapa HOM05D002581 ORTHO05D002828 1.2e-23 116.3 305 31.1
C04p63980 Brassica napus HOM05D002581 ORTHO05D002828 1.8e-22 112.5 305 30.5
A04p26560 Brassica napus HOM05D002581 ORTHO05D002828 1.9e-21 109.0 305 30.2
HPP92_022551 Vanilla planifolia HOM05D005129 ORTHO05D005585 5.0e-17 94.4 138 37.0
Eucgr.D00091 Eucalyptus grandis HOM05D005129 ORTHO05D005585 3.5e-15 88.2 137 43.1
MELO3C005104.2 Cucumis melo HOM05D005129 ORTHO05D005585 1.3e-12 79.7 102 46.1
SMO228G0186 Selaginella moellendorffii HOM05D019256 ORTHO05D023510 5.0e-09 67.8 338 25.1
Aqoxy2G01760 Aquilegia oxysepala HOM05D029901 ORTHO05D005585 1.9e-08 65.9 92 41.3
SHI24814 Sapria himalayana HOM05D005129 ORTHO05D005585 4.6e-07 61.2 381 23.1


User provided reference genes

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