Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046871.2 Olea europaea HOM05D004223 ORTHO05D004792 3.1e-145 518.5 265 100.0
Oeu019944.1 Olea europaea HOM05D004223 ORTHO05D004792 6.5e-111 404.4 266 81.2
Nitab4.5_0001655g0250 Nicotiana tabacum HOM05D004223 ORTHO05D004792 6.1e-93 344.7 264 68.9
Solyc02g070860.4 Solanum lycopersicum HOM05D004223 ORTHO05D004792 2.6e-91 339.3 264 67.0
Dinv32277 Davidia involucrata HOM05D004223 ORTHO05D004792 5.7e-91 338.2 265 67.5
Sopen02g019940 Solanum pennellii HOM05D004223 ORTHO05D004792 9.8e-91 337.4 264 67.0
Dinv30715 Davidia involucrata HOM05D004223 ORTHO05D004792 4.9e-90 335.1 268 67.2
Migut.M00929 Erythranthe guttata HOM05D004223 ORTHO05D004792 3.1e-89 332.4 264 67.0
Cc09_g08890 Coffea canephora HOM05D004223 ORTHO05D004792 4.5e-88 328.6 264 65.5
Actinidia07682 Actinidia chinensis HOM05D004223 ORTHO05D004792 2.5e-86 322.8 268 62.7
Actinidia19511 Actinidia chinensis HOM05D004223 ORTHO05D004792 3.3e-86 322.4 266 63.5
Rhsim02G0155900 Rhododendron simsii HOM05D004223 ORTHO05D004792 7.3e-86 321.2 264 62.9
Prupe.4G077600 Prunus persica HOM05D004223 ORTHO05D004792 6.1e-85 318.2 267 61.4
CAN.G257.3 Capsicum annuum HOM05D004223 ORTHO05D004792 5.2e-84 315.1 264 63.3
Migut.H01375 Erythranthe guttata HOM05D004223 ORTHO05D004792 4.4e-83 312.0 266 65.4
RcHm_v2.0_Chr5g0013511 Rosa chinensis HOM05D004223 ORTHO05D004792 1.1e-81 307.4 269 62.8
MD05G1287300 Malus domestica HOM05D004223 ORTHO05D004792 1.4e-81 307.0 267 63.7
Nn3g20665 Nelumbo nucifera HOM05D004223 ORTHO05D004792 2.7e-80 302.8 268 61.2
FvH4_3g05960 Fragaria vesca HOM05D004223 ORTHO05D004792 1.0e-79 300.8 269 61.3
SalBow8G4695 Salvia bowleyana HOM05D004223 ORTHO05D004792 1.3e-79 300.4 306 57.2
SalBow8G5598 Salvia bowleyana HOM05D004223 ORTHO05D004792 1.3e-79 300.4 306 57.2
MSTRG.7472 Avicennia marina HOM05D004223 ORTHO05D004792 3.0e-79 299.3 243 67.5
MD10G1264700 Malus domestica HOM05D004223 ORTHO05D004792 6.6e-79 298.1 266 60.9
Peaxi162Scf00214g01114 Petunia axillaris HOM05D004223 ORTHO05D004792 7.3e-78 294.7 245 65.3
DCAR_027947 Daucus carota HOM05D004223 ORTHO05D004792 1.6e-77 293.5 266 58.3
HanXRQChr04g0118281 Helianthus annuus HOM05D004223 ORTHO05D004792 1.1e-76 290.8 265 60.0
Glyma.08G084000 Glycine max HOM05D004223 ORTHO05D004792 3.1e-76 289.3 269 57.2
arahy.Tifrunner.gnm1.ann1.KB83YE Arachis hypogaea HOM05D004223 ORTHO05D004792 4.0e-76 288.9 266 59.0
DCAR_003936 Daucus carota HOM05D004223 ORTHO05D004792 4.0e-76 288.9 265 60.8
arahy.Tifrunner.gnm1.ann1.EM1NUG Arachis hypogaea HOM05D004223 ORTHO05D004792 1.5e-75 287.0 266 58.6
Glyma.05G129300 Glycine max HOM05D004223 ORTHO05D004792 4.4e-75 285.4 269 57.2
Phvul.002G194500 Phaseolus vulgaris HOM05D004223 ORTHO05D004792 7.5e-75 284.6 267 57.3
PSO675G0042 Papaver somniferum HOM05D004223 ORTHO05D004792 9.8e-75 284.3 273 56.8
Duzib235G1300 Durio zibethinus HOM05D004223 ORTHO05D004792 1.3e-74 283.9 269 59.5
VMungo0251G1974 Vigna mungo HOM05D004223 ORTHO05D004792 2.9e-74 282.7 265 57.0
Nitab4.5_0001040g0160 Nicotiana tabacum HOM05D004223 ORTHO05D004792 6.4e-74 281.6 264 60.6
Gohir.D10G040000 Gossypium hirsutum HOM05D004223 ORTHO05D004792 8.3e-74 281.2 270 57.8
Gorai.011G042100 Gossypium raimondii HOM05D004223 ORTHO05D004792 8.3e-74 281.2 270 57.8
PSO541G2658 Papaver somniferum HOM05D004223 ORTHO05D004792 8.3e-74 281.2 273 56.0
Aqoxy1G01765 Aquilegia oxysepala HOM05D004223 ORTHO05D004792 1.1e-73 280.8 268 57.8
EL10Ac8g19745 Beta vulgaris HOM05D004223 ORTHO05D004792 1.9e-73 280.0 275 56.4
Gohir.A10G039200 Gossypium hirsutum HOM05D004223 ORTHO05D004792 4.1e-73 278.9 270 57.4
GSVIVG01021418001 Vitis vinifera HOM05D004223 ORTHO05D004792 4.1e-73 278.9 268 59.3
Ciclev10015725m.g Citrus clementina HOM05D004223 ORTHO05D004792 5.4e-73 278.5 273 57.1
Thecc.06G153700 Theobroma cacao HOM05D004223 ORTHO05D004792 7.0e-73 278.1 270 59.6
QL05p059118 Quercus lobata HOM05D004223 ORTHO05D004792 7.8e-72 274.6 268 57.1
Lalb_Chr12g0208891 Lupinus albus HOM05D004223 ORTHO05D004792 1.7e-71 273.5 265 56.2
Cfa023352 Carpinus fangiana HOM05D004223 ORTHO05D004792 1.1e-70 270.8 268 54.1
CiPaw.10G093300 Carya illinoinensis HOM05D004223 ORTHO05D004792 4.3e-70 268.9 268 56.7
Ciclev10031935m.g Citrus clementina HOM05D004223 ORTHO05D004792 4.3e-70 268.9 268 54.1
QL08p044806 Quercus lobata HOM05D004223 ORTHO05D004792 1.2e-69 267.3 265 55.5
AUR62030243 Chenopodium quinoa HOM05D004223 ORTHO05D004792 2.1e-69 266.5 267 54.7
Sc05g0006430 Simmondsia chinensis HOM05D004223 ORTHO05D004792 2.1e-69 266.5 267 55.1
Medtr4g096650 Medicago truncatula HOM05D004223 ORTHO05D004792 2.8e-69 266.2 267 54.3
CANSAT35G1433 Cannabis sativa HOM05D004223 ORTHO05D004792 8.1e-69 264.6 270 53.0
Atru.chr6.2065 Acer truncatum HOM05D004223 ORTHO05D004792 1.4e-68 263.8 269 53.5
Lj4g0000090 Lotus japonicus HOM05D004223 ORTHO05D004792 1.8e-68 263.5 267 53.9
TWI59G0075 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 2.3e-68 263.1 266 54.1
Manes.17G067700 Manihot esculenta HOM05D004223 ORTHO05D004792 3.1e-68 262.7 268 55.2
PGR042G0116 Punica granatum HOM05D004223 ORTHO05D004792 3.1e-68 262.7 269 54.3
Psat7g090920 Pisum sativum HOM05D004223 ORTHO05D004792 4.0e-68 262.3 267 54.3
FAN11G3669 Fragaria x ananassa HOM05D004223 ORTHO05D004792 8.9e-68 261.2 257 57.2
Potri.005G203600 Populus trichocarpa HOM05D004223 ORTHO05D004792 2.0e-67 260.0 269 56.1
TWI53G0125 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 2.2e-66 256.5 248 58.5
ECA236G2733 Erigeron canadensis HOM05D004223 ORTHO05D004792 1.9e-65 253.4 219 63.5
Lsat_1_v5_gn_7_32901 Lactuca sativa HOM05D004223 ORTHO05D004792 2.4e-65 253.1 243 58.0
Thecc.01G170900 Theobroma cacao HOM05D004223 ORTHO05D004792 2.4e-65 253.1 267 50.9
TPR.G4831 Trifolium pratense HOM05D004223 ORTHO05D004792 4.1e-65 252.3 268 53.4
MELO3C019676.2 Cucumis melo HOM05D004223 ORTHO05D004792 1.2e-64 250.8 269 52.0
Sed0004086 Sechium edule HOM05D004223 ORTHO05D004792 2.7e-64 249.6 268 51.1
Sed0020532 Sechium edule HOM05D004223 ORTHO05D004792 2.3e-63 246.5 266 50.4
ClCG02G018450 Citrullus lanatus HOM05D004223 ORTHO05D004792 1.9e-62 243.4 270 50.0
SGA_v2.0_scaffold1G00153 Striga asiatica HOM05D004223 ORTHO05D004792 1.9e-62 243.4 267 54.3
Sabra02G0047600 Salix brachista HOM05D004223 ORTHO05D004792 7.3e-62 241.5 266 51.9
Duzib133G0675 Durio zibethinus HOM05D004223 ORTHO05D004792 9.5e-62 241.1 244 52.9
Prupe.3G175100 Prunus persica HOM05D004223 ORTHO05D004792 1.2e-61 240.7 268 51.9
Zm00001eb153380 Zea mays HOM05D004223 ORTHO05D004792 1.2e-61 240.7 266 47.0
Potri.002G058500 Populus trichocarpa HOM05D004223 ORTHO05D004792 2.1e-61 240.0 267 51.7
Aa31LG1G24730 Aethionema arabicum HOM05D004223 ORTHO05D004792 2.8e-61 239.6 269 49.1
TPR.G12676 Trifolium pratense HOM05D004223 ORTHO05D004792 2.8e-61 239.6 276 49.3
PGR042G1019 Punica granatum HOM05D004223 ORTHO05D004792 6.2e-61 238.4 269 50.6
Ca_06273_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 1.1e-60 237.7 273 49.1
CsaV3_6G013790 Cucumis sativus L. HOM05D004223 ORTHO05D004792 1.4e-60 237.3 269 50.2
Lsat_1_v5_gn_7_7501 Lactuca sativa HOM05D004223 ORTHO05D004792 1.4e-60 237.3 249 55.8
Hund21517 Selenicereus undatus HOM05D004223 ORTHO05D004792 1.4e-60 237.3 245 53.5
RcHm_v2.0_Chr2g0151741 Rosa chinensis HOM05D004223 ORTHO05D004792 5.2e-60 235.3 269 50.6
THA.LOC104803347 Tarenaya hassleriana HOM05D004223 ORTHO05D004792 8.9e-60 234.6 267 47.9
FAN16G0695 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.2e-59 234.2 256 53.1
ATR0585G108 Amborella trichopoda HOM05D004223 ORTHO05D004792 7.6e-59 231.5 264 48.1
MD17G1137300 Malus domestica HOM05D004223 ORTHO05D004792 7.6e-59 231.5 267 49.8
Medtr5g091370 Medicago truncatula HOM05D004223 ORTHO05D004792 1.3e-58 230.7 274 46.4
CDE09G0669 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 3.8e-58 229.2 267 49.4
unitig_92.g28154 Utricularia gibba HOM05D004223 ORTHO05D004792 8.4e-58 228.0 265 51.3
FvH4_6g38510 Fragaria vesca HOM05D004223 ORTHO05D004792 1.4e-57 227.3 268 48.9
Os01g0751300 Oryza sativa ssp. japonica HOM05D004223 ORTHO05D004792 2.4e-57 226.5 265 46.8
AL5G40980 Arabidopsis lyrata HOM05D004223 ORTHO05D004792 7.1e-57 224.9 270 44.4
AT3G59090 Arabidopsis thaliana HOM05D004223 ORTHO05D004792 1.6e-56 223.8 273 44.7
COL.COLO4_06072 Corchorus olitorius HOM05D004223 ORTHO05D004792 6.0e-56 221.9 183 66.7
BraA07t30092Z Brassica rapa HOM05D000230 ORTHO05D000176 2.3e-55 219.9 270 44.1
CARHR169510 Cardamine hirsuta HOM05D004223 ORTHO05D004792 8.7e-55 218.0 270 43.0
MELO3C002724.2 Cucumis melo HOM05D004223 ORTHO05D004792 1.1e-54 217.6 264 50.8
Sed0009895 Sechium edule HOM05D004223 ORTHO05D004792 1.9e-54 216.9 266 50.8
vmacro10944 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 2.5e-54 216.5 435 35.4
Carub.0005s2585 Capsella rubella HOM05D004223 ORTHO05D004792 3.3e-54 216.1 270 44.1
Eucgr.A02011 Eucalyptus grandis HOM05D004223 ORTHO05D004792 4.3e-54 215.7 269 48.7
Thhalv10006050m.g Eutrema salsugineum HOM05D004223 ORTHO05D004792 4.3e-54 215.7 270 44.1
Gohir.A07G080900 Gossypium hirsutum HOM05D004223 ORTHO05D004792 7.3e-54 214.9 268 48.5
BcaC07g40242 Brassica carinata HOM05D004223 ORTHO05D004792 1.3e-53 214.2 270 43.7
COL.COLO4_07169 Corchorus olitorius HOM05D000230 ORTHO05D000176 2.1e-53 213.4 266 47.7
C06p25880 Brassica napus HOM05D000230 ORTHO05D000176 6.2e-53 211.8 270 43.0
BolC6t37750H Brassica oleracea HOM05D000230 ORTHO05D000176 6.2e-53 211.8 270 43.0
HPP92_021479 Vanilla planifolia HOM05D004223 ORTHO05D004792 6.2e-53 211.8 266 44.7
BcaC07g40241 Brassica carinata HOM05D004223 ORTHO05D004792 8.1e-53 211.5 271 43.5
A09p51500 Brassica napus HOM05D004223 ORTHO05D004792 1.1e-52 211.1 270 43.7
BraA09t40587Z Brassica rapa HOM05D004223 ORTHO05D004792 1.1e-52 211.1 270 43.7
A07p24480 Brassica napus HOM05D000230 ORTHO05D000176 1.8e-52 210.3 270 43.0
C08p34260 Brassica napus HOM05D004223 ORTHO05D004792 2.4e-52 209.9 270 43.3
BolC8t51023H Brassica oleracea HOM05D004223 ORTHO05D004792 2.4e-52 209.9 270 43.3
Sp5g03900 Schrenkiella parvula HOM05D004223 ORTHO05D004792 3.1e-52 209.5 269 42.8
Gorai.001G092500 Gossypium raimondii HOM05D004223 ORTHO05D004792 4.0e-52 209.1 268 48.5
FAN02G1578 Fragaria x ananassa HOM05D004223 ORTHO05D004792 7.6e-51 204.9 272 45.6
ClCG03G006980 Citrullus lanatus HOM05D004223 ORTHO05D004792 3.8e-50 202.6 331 42.0
Ca_18272_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 1.1e-49 201.1 180 56.1
SGA_v2.0_scaffold333G49006 Striga asiatica HOM05D004223 ORTHO05D004792 1.4e-49 200.7 231 53.7
BcaC08g44958 Brassica carinata HOM05D000230 ORTHO05D000176 4.6e-48 195.7 264 42.0
Actinidia39561 Actinidia chinensis HOM05D004223 ORTHO05D004792 7.8e-48 194.9 266 44.7
Atru.chr10.1339 Acer truncatum HOM05D004223 ORTHO05D004792 1.7e-47 193.7 161 62.7
Ah.14g086580 Amaranthus hybridus HOM05D004223 ORTHO05D004792 2.5e-46 189.9 188 55.9
Psat2g016680 Pisum sativum HOM05D004223 ORTHO05D004792 1.6e-45 187.2 214 47.7
BcaB02g07485 Brassica carinata HOM05D004223 ORTHO05D004792 1.5e-43 180.6 315 36.2
Duzib160G0026 Durio zibethinus HOM05D004223 ORTHO05D004792 1.5e-43 180.6 269 45.7
Gohir.D07G086500 Gossypium hirsutum HOM05D004223 ORTHO05D004792 1.5e-43 180.6 265 43.8
CsaV3_1G032560 Cucumis sativus L. HOM05D004223 ORTHO05D004792 1.7e-42 177.2 214 53.3
MBI10_g27412_MAGBIO Magnolia biondii HOM05D004223 ORTHO05D004792 2.2e-42 176.8 171 56.7
CiPaw.09G126400 Carya illinoinensis HOM05D004223 ORTHO05D004792 1.9e-41 173.7 161 62.1
TAR624G0476 Trochodendron aralioides HOM05D004223 ORTHO05D004792 1.9e-41 173.7 165 60.6
Pp3c6_6380 Physcomitrium patens HOM05D004223 ORTHO05D004792 2.1e-40 170.2 229 42.8
Oeu040113.1 Olea europaea HOM05D004223 ORTHO05D004792 3.3e-38 162.9 154 60.4
Pp3c5_22420 Physcomitrium patens HOM05D004223 ORTHO05D004792 5.6e-38 162.2 230 42.2
unitig_37.g12105 Utricularia gibba HOM05D004223 ORTHO05D004792 4.8e-37 159.1 149 57.7
Mapoly0056s0052 Marchantia polymorpha HOM05D004223 ORTHO05D004792 3.1e-36 156.4 237 38.0
SMO296G0001 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 4.0e-36 156.0 247 39.7
Duzib138G1261 Durio zibethinus HOM05D004223 ORTHO05D004792 2.2e-34 150.2 144 54.2
Haze_05551 Corylus avellana HOM05D004223 ORTHO05D004792 9.3e-33 144.8 121 59.5
CSS0012222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 2.7e-32 143.3 104 69.2
SalBow7G0638 Salvia bowleyana HOM05D004223 ORTHO05D004792 4.6e-32 142.5 117 65.0
Pp3c25_8320 Physcomitrium patens HOM05D004223 ORTHO05D004792 6.7e-31 138.7 260 35.0
FAN14G4329 Fragaria x ananassa HOM05D004223 ORTHO05D004792 7.4e-30 135.2 264 35.2
CSS0013327 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 1.5e-27 127.5 109 65.1
SMO174G0155 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 2.0e-27 127.1 233 36.5
Haze_13521 Corylus avellana HOM05D004223 ORTHO05D004792 4.5e-27 125.9 108 54.6
CDE02G0113 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 3.5e-24 116.3 122 50.8
Dinv05252 Davidia involucrata HOM05D004223 ORTHO05D004792 1.6e-21 107.5 72 73.6
MSTRG.16215 Avicennia marina HOM05D004223 ORTHO05D004792 3.8e-18 96.3 77 64.9
unitig_37.g12104 Utricularia gibba HOM05D004223 ORTHO05D004792 4.2e-17 92.8 105 49.5
FAN05G0022 Fragaria x ananassa HOM05D004223 ORTHO05D004792 3.6e-16 89.7 221 31.7
PGSC0003DMG400012960 Solanum tuberosum HOM05D004223 ORTHO05D004792 1.8e-15 87.4 80 56.2
Dinv05253 Davidia involucrata HOM05D004223 ORTHO05D004792 1.5e-14 84.3 96 54.2
FAN21G3874 Fragaria x ananassa HOM05D004223 ORTHO05D004792 5.7e-14 82.4 79 58.2
QL05p059167 Quercus lobata HOM05D004223 ORTHO05D004792 1.8e-12 77.4 99 46.5
Actinidia22922 Actinidia chinensis HOM05D004223 ORTHO05D004792 9.1e-12 75.1 108 45.4
CSS0014222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 9.1e-12 75.1 57 70.2
PGSC0003DMG402008294 Solanum tuberosum HOM05D004223 ORTHO05D004792 9.4e-09 65.1 45 68.9
Atru.chr10.1338 Acer truncatum HOM05D004223 ORTHO05D004792 5.7e-06 55.8 45 57.8


User provided reference genes

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